Paramisgurnus dabryanus (large-scale loach): 135748715
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Entry
135748715 CDS
T10799
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdab03041
]
135748715 (zfr)
Spliceosome [BR:
pdab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135748715 (zfr)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
Colicin_Ia
zf-U1
Motif
Other DBs
NCBI-GeneID:
135748715
NCBI-ProteinID:
XP_065123058
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All DBs
Position
5:11680354..11698623
Genome browser
AA seq
1082 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHGAAAQYSQQPAPGVAYTHPTTVASYTV
HQAPVAAHTVAAAYAPTAATVAVARPAPVAVAAAATAAAYGGYQPTHAATDYGYAQRQPE
VPPPPPPVTSQNYQDSYSYVRSTAPAVAYDSKQYYQQSAATPAVAAAAAAAAAQPQPTVA
ESYYQTAPKTGYSQGATPYTQTQQTQRQVTAIKPATPSPATSTFSIYPVSSAVQPVAGAA
SVVPSYSQSPTYSTNAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQKQAAVAAATAAWTG
STFTKKTPFQNKTLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKVS
QTSSSSSSSSSGAGNSARGIQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGK
PIPSSEPSVISQASSSSTAAPNKTVSSTINSSTSNSMSNFSSSVSNASYLKSVGMSNSTA
ASASQGKNLASSSLTVNSSVKKVNTPKINFVGGNKLQTTAAKNEESKVEAAKPAQSVPVS
TLDVKNETSDCLSPQSALAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNA
KEMHLKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWR
MEMRRYEEDMYWRRMEEEQHHWEDRRRMPDGGYPQGPPGPPGLLGVRPGMPIPQPQGPMP
PRRPDSSDDRYVMTKHAAIYPSEDELQAIQKIVSITERALKLVSDIISDQDANAKVKEED
KEKKDPPKDRLLKGVMRVGVLAKGLLLRGDKNVNLVLLCSEKPTTSLLTRIVDHLPKQLT
VVTPEKYEVKGSTQEAAIILTSCGDPKMQVTITLTSPVIREESVRDGDVTSSMVTDPADV
LDRQKCLDALAALRHAKWFQARANGLQSCVIVIRILRDLCQRVPTWSAFPSWAMELLVEK
AISSAPGPMSPGDALRRVFECISSGILLSGAPGLIDPCEKNPTDTLGAMEEQQREDITLS
AQFALRLLAFRQIHKVLGMDPLPQMNSRFNVRNNRKRRRDNSDSNDGFEAEGKKDKKDYE
GF
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgtccagtagtctccttcacctatgtgcccagccggctaggtgaagat
gccaaaatggccaccggcaactattttggatttacccatggtgctgcggcgcagtacagt
caacagccggcccctggggtagcatacacccaccccactacagtggccagctatactgtg
caccaagcacctgtggcagcacacacggtggcggcagcctacgcccctacagctgccacg
gttgccgtagccaggccagcaccagtcgctgtagcagctgcggctactgctgccgcttat
ggaggataccaacctacccatgctgctacggattatgggtatgcccaaaggcagccggag
gtccctccaccaccacctccagtcacttcacaaaactaccaagactcgtattcatatgta
cggtccacggcaccagctgtggcatatgacagcaagcaatattaccagcagtctgcagct
acaccagccgtagcggcggcggctgctgcggcggcagctcagccacaacccactgtggct
gaatcctactatcagacagcacctaaaactggatacagtcaaggcgccactccttacact
cagacccagcaaacacagcgtcaggttacagccataaagccagccacccccagccccgcc
acctcaaccttctccatttacccagtgtcctctgctgtacagcccgttgcaggggctgca
tctgtagtcccatcctactcgcagagtcccacttacagcaccaacgcagtcacatactct
ggaacatcatactctgggtatgaagctgctgtgtattcagccgcctcttcctactatcag
cagcagcaacagcagcaaaaacaggcagctgttgctgcagccactgccgcatggaccggc
agcactttcaccaagaagacccccttccagaacaaaacgctcaaacccaaacagccccca
aaaccaccgcagatacactactgtgacgtctgcaagatcagttgtgccggaccccagacc
tataaggaacacttggagggccagaagcacaagaagaaagaagccgctctaaaggtgtcc
cagacaagcagtagcagcagcagcagcagctctggagctggaaactctgcccgtggcatc
caaaatcagctacgctgtgagctctgtgacgtctcctgtactggggctgatgcctacgcc
gcacatatcagaggagccaaacaccagaaggtggtgaaattgcacaccaaactaggaaag
ccgatcccatccagcgagcccagtgtcattagccaagcctccagctccagcactgcagct
cccaataagaccgtcagctccaccatcaacagttccacaagcaactccatgtccaacttt
tcttcctctgtttccaatgcgtcatacctaaaatctgttggcatgagtaacagcacagca
gcttcagcctcacagggcaagaacttggcatccagcagccttacagtcaacagctcagtc
aagaaggtcaacacccccaagatcaactttgttggggggaacaagttacagaccactgct
gctaaaaatgaggaatcaaaggttgaggcagccaaaccagcccagtctgtgcctgtatca
acactggatgtgaagaatgaaacttctgactgtctgtcacctcagtcagcgctcgcagcc
ctgcagagcgacgttcagcctgtcggacatgactatgttgaagaggtaaggaatgatgaa
ggaaaagttatccgtttccactgcaagctgtgcgaatgcagtttcaatgatccgaatgca
aaagaaatgcatctaaagggaagaagacatcgcctgcagtataagaaaaaggtgaaccca
gatctccaggtggaggtcaagcctagcatcagagctaggaagatccaagaagaaaagatg
agaaagcaaatgcagaaggaagaatactggagaagacgtgaagaagaggagcgctggagg
atggaaatgaggcgctatgaagaagacatgtactggcggcgaatggaggaagagcagcac
cactgggaggacagacgacgaatgcctgacggaggttatccgcagggtccacctggacct
ccaggtctcctgggagtgaggcctggcatgcccattcctcagccacaaggaccaatgcct
ccacgtcgccctgattcctcagacgatcgttacgtgatgaccaaacacgcagctatttac
ccctctgaagatgagcttcaggccatccagaagatcgtctcaatcacagagagggcactt
aagctagtctctgacataatcagtgaccaagatgcaaacgcaaaggtcaaagaagaggac
aaagagaagaaagatcctcccaaagacaggttgctgaaaggcgtgatgcgagtaggcgtt
cttgccaagggcttgcttctgcgaggagacaaaaatgtcaacctggtcctcctgtgttct
gaaaagccaaccacgagtctgctcaccagaattgtggaccatctccccaaacagctcacg
gtggtaacaccagagaaatatgaggttaaaggttccacccaagaggctgctattatcctc
acctcctgcggtgaccccaagatgcaggtgaccatcactcttacctcgcccgtcatccga
gaggagagcgtccgggatggagatgtaacctcgagtatggtgacagacccagcggacgtc
ttggacaggcaaaaatgccttgacgctctggctgccctacgccacgctaagtggttccag
gctagagctaatggactccagtcatgtgtgattgtcattcgaatactgcgtgacctttgt
cagcgagtacctacctggtctgcctttccaagctgggctatggagctgttggtggagaag
gccatcagcagtgctcctggaccaatgagccctggagatgctctccgaagagtctttgaa
tgcatttcatccggcattcttctgtctggtgctccaggactgatcgatccctgtgagaag
aatccaacagacacattgggtgcaatggaggagcagcagagagaggatattacattaagc
gcccagtttgctctgagactgctggcgttccgccagattcacaaggttctgggtatggac
ccactgccccagatgaactcgcgcttcaacgtacgaaataaccgcaagagacgccgcgac
aacagcgacagtaatgatggattcgaagctgaagggaagaaggacaagaaagattatgaa
ggcttctaa
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