Paramisgurnus dabryanus (large-scale loach): 135749080
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Entry
135749080 CDS
T10799
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03013
Nucleocytoplasmic transport
pdab03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
135749080 (srrm1)
Spliceosome [BR:
pdab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
135749080 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135749080
NCBI-ProteinID:
XP_065123545
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Position
17:complement(34325269..34334393)
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AA seq
939 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKHKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITQRVNEIL
GFEDDVVIEFVFNQLEEKNPDAKMMQINLTGFLNGKNAREFMKDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKIDDDKREKENKERAQSRSPKRRKSRSPVKRDRKA
SPSRSPRRKPSPPASPPSSPPNQREEPKEEPDQLESSKPEPLIQEASSTSDLVAEMKPDS
VSEAVKESSPEKISKSEDKPKPKDKDREKDGRRDRPRHRSRSRSPRSRRRPRSRSRSFSP
RRRPSPRRRISPRRRSPPRRQPPPRHRRSRSPVRRRRSRSRSSSGSSSSRSPHKRPGKRG
SATPPRKVPRRSDLSSPPRRRGRSPSGPDTSPSAARNRTGGRNDNHSPPKPPRRSDVSDS
EEEKLGDGSMADSVQQRRQYRRQNQKSSSDTGSSSSSEDEGPRQKNRGAAARNGDVRRRR
SHSPGSPRRRHREASPRKRRSPSPAFRRHRSPSPARRRRSPSPPPRRRSPSPPTRHYSPP
IQRRYSPSPLPAQKRRPSGSPPPRRRASPSPQVSKRRGSPSPPVSKRRGSPSPPVSKRRG
SQSPPVSKRRGSPSPPVSKRRGSPSPPVSKRRGSPSPPVSKRRASPSPPVSKRRASPSPP
VSKRRGSPSPPVSKRRASPSPVAKRRSSRSPKRTRGSSPGKRRTPPSSASPPPRHRRSSP
NPPAHQRGRDTRSSPPTHSSRVSSSPQARYGPSGSSPQRVRRQASPSHGTRPIRRVSRTP
EPRKPQRDSQSPQPVRRQVSRSPSASPLPAAPKRTASVSPHSASRSPPPPAKKNSSGSQS
PSPNKNSDVEGGKKKKKKKEKKHKKEKKHKKHKKQKKEKSGEEKIEAAIGVTEQEAEPDS
DQKKESDSEVEDSLDDLEKHLREKALRSMRKAQLSPSSQ
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggggtttttccgcggcaccagtgcggagcaagataaccgcttcagcaacaaa
cacaagaagctgttgaagcagctgaagtttgcagaatgtctggagaagaaggtggacatg
tccaaggtcaacctggaagtcatcaaaccctggatcacccagcgtgtgaatgagatcctt
ggctttgaggatgatgttgtcattgagtttgtcttcaaccagctggaggaaaagaatcca
gatgcgaagatgatgcagattaatttgactgggttcctgaacggaaagaacgctcgggaa
ttcatgaaggacctctggccgctgttgctaagcgctcaggagaacatcgctggtattccg
tctgccttcctggagcagaagaaagaggaaatcaaacagagacaaattgaacaggaaaaa
ctagcctctctgaaaaagatagatgacgataaaagagaaaaggagaacaaggagcgagct
cagtccagaagccctaaacggaggaaatctcgttcccctgtgaagcgggaccggaaagcc
agcccttcccgctctcctcgtcgaaaaccaagtccacccgcctcaccgccttctagtccg
cccaatcaaagagaagagccgaaagaagaaccggaccaattggagagctccaaaccagaa
ccactaattcaggaggcttcttctaccagtgatctggtggctgagatgaagccagactct
gtgtctgaggctgtgaaagagtcgtcccctgaaaaaatctccaaatcagaagacaagccc
aaacctaaagacaaggatagagagaaggacggacgcagagatcgcccacgtcaccgctct
cgttcccgatcacctcgttctcgcagacgacccagatcacggtccaggtcattctctcct
cgccgcagaccgagtcccaggagacgaatctctccgagacgcaggagcccccctagacgc
cagccaccccctagacacagacgcagccgttcacctgttcgcaggcggcgctcacgttcc
cgatcctcttcaggcagctcttcctctcggtctccccataaaagaccaggtaaacgtggg
tcagctacccctcccagaaaagttccacgtcgttcggatctatccagtccacccagaaga
agaggccggagcccttcgggtccagacaccagcccttcagctgcgagaaacaggaccggt
ggaaggaacgacaatcattctcctccaaaaccacccagacgatccgatgtatcagattct
gaggaggagaagttgggcgacgggtcaatggcagattctgtccagcagcgacgtcagtat
cgcagacagaatcagaaatcctcttcagacacggggtcatcctcttcctctgaagatgaa
ggcccaaggcagaagaacagaggcgcagctgctaggaatggtgatgtcaggagacggcgg
agccattcacctggctcaccacggagaaggcacagagaggcatccccaagaaaaagacgt
tccccatcacctgctttccgtagacatcgctctccatctccagctcgtcgccgccggtcg
ccctcacctcctccaagacgcagatctccatcccctcctacccggcactactctcctcct
atccagcggcgctacagcccctctccccttccagctcaaaaaagacgcccatcagggtct
ccccctcctaggcgcagagcgtctccatcaccacaggtgtccaagcgcagaggttctcca
tcaccaccggtgtccaagcggagaggttctccatcaccacccgtgtctaagcgcagaggt
tctcaatcaccacctgtgtccaagcgcagagggtccccatcaccacccgtgtccaagcgc
agagggtccccatcaccacccgtgtccaagcgcagaggatctccatcaccacccgtgtcc
aagcgcagggcatccccatcaccacccgtgtccaagcgcagggcatccccatcaccaccc
gtgtccaagcgcagaggatccccatcaccacccgtgtccaagcgcagggcatctccctca
ccagtagccaaacggcgctcatctcgctcccccaaacggactcgtggtagtagtccagga
aagaggcgcactccgccctcttctgcttcaccaccaccccgccatcgtagaagttctccg
aatccccctgcacaccaacggggcagggacacccgttcctctccccctacacattcttct
cgagtgtcttcgagtcctcaagctcgatatgggccttctggttcctccccacaacgagta
agacgtcaggcgtcgccgtctcatggcactagacccattcgaagggtctcccgcacacca
gaaccacgcaaaccacagcgagattctcagagcccccagccagtaaggaggcaggtgtct
cgttcaccatccgcttctcctcttccggccgcaccaaagagaactgcttcagtctctcct
cactctgctagtcgctccccacctccacctgcaaagaagaacagcagtgggtcccaaagc
ccatcaccaaacaagaactctgatgtagagggtggaaaaaagaagaaaaagaagaaggag
aagaaacacaaaaaggagaagaaacacaagaagcataagaagcaaaagaaagagaagagt
ggagaagagaaaattgaagcagctataggagtcaccgaacaggaggcggagcctgattct
gatcagaaaaaggaatcagacagtgaagtagaagacagtttggatgatctggagaagcac
ctgcgtgagaaagctctccggtccatgaggaaggcccagttgtctccgtcttctcaatga
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