Paramisgurnus dabryanus (large-scale loach): 135749140
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Entry
135749140 CDS
T10799
Symbol
rorab
Name
(RefSeq) nuclear receptor ROR-alpha B isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135749140 (rorab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pdab03310
]
135749140 (rorab)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
135749140 (rorab)
Nuclear receptors [BR:
pdab03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
135749140 (rorab)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Hera_RBD
Motif
Other DBs
NCBI-GeneID:
135749140
NCBI-ProteinID:
XP_065123619
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Position
2:complement(27873910..27919696)
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AA seq
526 aa
AA seq
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MESPPEPVTLSDKSVSEAGASVEDSPVKPDSKAETDKPAAVKRQSCSSTNKDVSSAKKAH
TSQIESIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQGTVSYSCPRQKSCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLFAEVQKHRQQQQQDKVGKDTDDGREPQP
PGEAEPLTPTYTHSANGVTELPDDLGGYVNGQTPETGKADSAIGGFYLDIQPSPDQSGLD
MDGIKLEPVCDLSSDSGLDQYCCYSNEDSSPSESDLDHLSENICKSHLETCQYLREELKP
SNWQTVLQADLDAYQKKSQEDMWQLCAVKVTEAVQYVVEFAKRIDGFMELCQNDQIVLLK
AGSLEVVFVRMCRAYNSQNNTVFFDSKYAGPEVFKALGCDDLISSVFEFAKSLSSLQLTE
DEIGLFSAYVLMSADRCWVQEKTRVEKLQQKIKVALQNLLQMNQRDEGILTKLVCKVSTV
RMLCRRHMEKLSAFRALYPEMVHTRFPPLYKELFGSDFEQALPQEA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggagtccccgccagagcctgtcacgctgtcggacaagagcgtttctgaagcgggcgct
tcggtggaggacagcccggtgaaaccggacagcaaggctgaaaccgacaaaccagcagca
gttaagcggcagagttgctcaagtacaaacaaggatgtgtcctcagcaaagaaagcacac
acatctcagatcgagagtattccctgtaaaatctgtggagataaatcatcagggattcat
tacggagtcatcacctgtgagggatgcaagggtttcttcaggaggagtcagcagggcact
gtgtcatattcttgtcctcggcagaagagctgtctgatcgaccgcaccagcagaaaccgc
tgccaacactgtcgcctgcagaaatgcttagcagtggggatgtcgagagatgctgtgaag
tttggccgcatgtctaagaagcagagggacagtctgtttgcagaggttcagaaacaccgt
caacagcagcagcaagacaaagttggtaaagatacagacgacggacgggaaccacagcct
cccggagaagcggaaccactcacgcccacttacacccactctgccaatggggtcacagag
ctcccagatgacctcggcggatacgtgaacggtcagaccccggagacgggtaaggcagat
tcagcgatcggtggattttacctggacattcagccctctccagaccaatcgggtctagac
atggatggcattaaactagaacctgtgtgcgacctcagctcagactctggcctggatcaa
tattgttgctatagcaatgaagactcttctccctctgaaagtgatctggaccatctgtca
gagaacatctgcaagtctcacctggagacgtgccagtatctcagagaagagctaaaacca
agcaactggcagacagtcctacaggccgacctggacgcctaccagaaaaagtctcaggag
gacatgtggcagctgtgtgcggttaaagtcactgaggccgtgcagtacgtggttgagttt
gccaagcgcattgatggattcatggagctctgtcagaacgatcagatcgtgctgctcaaa
gcaggttctttagaagttgtgtttgtgaggatgtgtcgggcgtataactcccaaaacaac
acagtctttttcgacagcaaatacgcggggccagaggtcttcaaagccctgggctgtgat
gatcttatcagctcggtgtttgagtttgctaagagtctgagctctctgcagctcaccgaa
gatgagatcggcctcttttcagcatacgtgctgatgtctgcagatcgctgctgggtgcag
gaaaagaccagggtggagaaactccagcagaagatcaaggtcgccctgcagaatttacta
cagatgaaccaaagggacgagggaattctcacaaagctggtctgtaaagtatccactgtc
cggatgctgtgccgtcgtcacatggagaaactgagcgcgttcagagctctgtacccagaa
atggtgcacacgcgcttccctccgctctataaagagctgttcggttcggactttgaacag
gctctgcctcaggaggcctga
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