Paramisgurnus dabryanus (large-scale loach): 135749167
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Entry
135749167 CDS
T10799
Symbol
copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdab04131
]
135749167 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdab04147
]
135749167 (copb1)
Membrane trafficking [BR:
pdab04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
135749167 (copb1)
Exosome [BR:
pdab04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
135749167 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
Cnd1
HEAT
HEAT_2
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
135749167
NCBI-ProteinID:
XP_065123667
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All DBs
Position
2:26798993..26812039
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AA seq
953 aa
AA seq
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MTAAENVCYTLINVTNDSEPPSEVSLKADLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLTTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDNLRPLIIEKMLEVFHSIKTVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVENELKKESGEVKPEEEVSAAPAPKLVTEMGTYVTQSALSTSRPSKKEEDRP
PLRGFLMDGDFYVAASLATTLTKVALHYVALTEEKKRQNSFVAEAMLIMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRRSLSHMLAVRLEEEKLSQKKESEK
RNVTVQADDPISFMQLTAKNETASKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGTASDRNCVVLSDIHIDIMDYIQPATCTDAEF
RQMWAEFEWENKVTVNTNIIELNEYLQHILKSTNMKCLTPEKALSGICGFMAANLYARSI
FGEDALANVSIEKPIHLGPDAPVNGHIRIRAKSQGMALSLGDKINLSQKKMAS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgccgagaatgtgtgttacacccttattaatgtcaccaatgactctgaacca
ccatcagaagtcagcttgaaggctgatttagaaaagggggaaatcaaagccaagacagag
gctttaaagaaggttatcatcatgatcctgaatggagagaaacttccagggctgttaatg
accatcatccggtttgtcctgccacttcaggatcacacaattaagaaactgctactggtt
ttttgggagattgtacccaaaaccactcctgatggtaaacttcttcaggaaatgattttg
gtctgcgatgcctatagaaaggatctccagcatcccaacgagttcatccgtggctccact
ctgcgctttttgtgcaagttgaaggagtctgagcttctggagcccctcatgccagcgatc
cgtgcctgtctggaacatcgtcacagttatgtgcgtcgtaatgcagtcctggccatctac
accatctacagaaactttgagcatttgatcccagatgctcctgagctgatccatgatttt
cttgtgaatgagaaggatgcaagctgcaagagaaacgcttttatgatgctgattcatgca
gatcaggatagagctctggactaccttagcacctgtattgatcaggtgcacacattcgga
gacattttacagcttgtcattgtagaactgatttataaggtctgccatgccaacccttca
gagagagcacgtttcatccgttgcatctacaacctactgcagtcctccagtcctgcagtt
aaatatgaagcagctggcactcttgtcacactgtccagcgctcccaccgctattaaggct
gctgctcagtgctacattgatctgatcattaaagagagtgacaacaacgttaagctcatt
gttctggaccggctgatcgagctgaaggaacacccaacacatgagcgagttctccaggac
ctggtgatggatattctgagggttttgaccacgcctgatcttgaggtccgcaagaagacc
ttacagttggctctggacctggtgtcatcccgcaatgtagaagagctggttatagtgctg
aagaaagaagtcattaaaaccaacaatgtgaccgagcatgaagatacagacaagtacagg
cagctgctagttcgtactctgcactcgtgtagtgtgcgcttccctgacatggcagccaac
gtcatccctgtgctgatggagttcctgagtgacactaatgaggcggccgcagccgatgtg
ctggagtttgtacgggaggctattcagaggtttgacaaccttcgacctcttatcattgag
aagatgctggaggtcttccattccatcaagacggtcaagatttatagaggtgcactgtgg
attttgggggaatattgcagcactaaagaggacatccagagcgtgatgacagaagtccgc
agatctttgggagagattcccattgtggagaacgagctgaagaaggagtctggagaagtg
aaaccagaggaggaggttagtgcggctccagctcctaagctggtgacagagatgggcacc
tacgtcactcaaagcgctctcagcacctccagaccatccaagaaagaagaggaccggcct
ccgctaagggggttcctgatggatggagacttctacgttgctgcctcattggccaccacc
ctcaccaaagtggccctgcattacgttgccctcaccgaagagaagaaaagacaaaattcg
ttcgtggcagaagccatgttgatcatggccaccatcctccatctgggcaaatcatctctg
cccaagaagcctattaccgatgatgatgtggaccgcatctcgctgtgtctcaaggtcctg
tccgaatgctcgcctctcatgaacgacattttcaacaaggagtgccgcagatccctttcc
cacatgctcgctgtcagactggaggaggagaaactgtctcaaaagaaagagtctgagaag
cgtaacgtgaccgttcaggcagacgatcctatctccttcatgcagctcacggctaagaat
gagacggcatccaaagaggatcaattccaactcagtctgctggctgctatgggtaacact
cagaggaaagaggctgcagacccgctggcctccaaacttaataaggtgacacagttgact
ggtttctcagatccagtctacgcagaagcatacgtccatgtcaatcaatatgacatcgtc
ctggatgtcctggttgttaatcagactagcgacactttacagaactgcaccctggagctg
gcgacacttggtgatcttaaattggttgagaagccatctcctctcacattggctcctcat
gacttcgccaacatcaaagccaatgtaaaagtcgcctccacagagaatggcattattttt
ggaaacatagtgtatgatgtgtcaggaacagccagtgacaggaactgcgttgtgctgagc
gacattcacatagatatcatggattacatccaacccgccacctgcacagatgccgagttc
agacagatgtgggctgaattcgaatgggagaacaaggttactgtcaacaccaacattata
gaactaaatgaatatctccaacacatccttaagtccaccaacatgaagtgcttgactcca
gagaaggctctttctggcatctgtggttttatggcggcgaacctgtatgcccgctctata
tttggagaggatgcccttgcaaacgtcagcattgaaaagcccatccatttgggtcctgac
gccccagtcaatggccacattcgcatccgcgccaagagccagggaatggcgttgagtctg
ggtgacaagatcaacctctcccagaagaagatggcgtcataa
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