Paramisgurnus dabryanus (large-scale loach): 135749396
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Entry
135749396 CDS
T10799
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03013
Nucleocytoplasmic transport
pdab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135749396 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
135749396 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135749396 (thoc2)
03041 Spliceosome [BR:
pdab03041
]
135749396 (thoc2)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
135749396 (thoc2)
Spliceosome [BR:
pdab03041
]
Complex C
Other components
EJC/TREX
135749396 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
135749396 (thoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
135749396
NCBI-ProteinID:
XP_065124054
LinkDB
All DBs
Position
16:complement(8981893..9069517)
Genome browser
AA seq
1550 aa
AA seq
DB search
MAALILPSDWLKNWDKSGKNEFLQFCQDLAGKPSIHEFVKDLQTALYELCWHVIQGNLKV
DVAASLLADVMELRDDLPSILADVFCILDIETGCLEEKHKRDHFTQLVGACLFCVPDGVL
KERLDPETLESLGLIKQAQQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SSNLTSHLVLENIKSLIGCFNLDPNRVLDIILEVYECRSEHDEFFVPLIKCYMCEHQTLC
HMLGFKFKFHQEPNGETPSSLYHVAAALLQHNLIALEDLYVHLLPVDSTIVEEHKRVILE
AKQIARKLTMVVVPSEKSDDKEKEKEKEEEKNEKPPDNQKLGLLEALLQIGDWQHAQSIM
DQMPAFYATSHKAIAIALCQLLHRTVEPLYRRAGMPKGAKGGLMAPLRNKQAPQPAESFD
DLSKDVFIMLCYLGPHLSHDPILFAKIVRLGKSFMKEYQSESRQDTKDKMDSLLSCFLSI
ADQVLLPSLSLMECNACMSEEIWGFFKLFPYQYRYRLYGQWKNDTYGNHPLLVKIKAQTV
DRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQWYDNLITPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTVEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFSEGGEKHLKLVGKLYDQCHDSLVQFGGFLAS
NLSTEDYIKRVPSVDVLCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNSQQKKV
HKYIAACEQVMAPVHEAVVSLHLPKVWDDLRPQFYATFWSLTMYDLAVPHNAYDREVNKL
KLQIKAIEENTEMPMNKKKKEKERCTALQDKLQEEEKKQLEHVQRVLHRLKLEKDNWLLA
KSTKNETITKFLQLCIFPRCVFSAIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSDIIY
TVASCTENESRRYGRFLCCMLETVTRWHSDRAVYEKECGNYPGFLTIFRASGFDGGNKAD
QLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALEC
RVHKIFQEEKEKRPDLYALAMGYSGQLKGRKVHMVPENEFHHKEQPVRSATPGTVQNGPG
NTGKTSATTAASAGKTEEGAIEDSDKSKEKSQAAQKTASKTSSAANKASSNGGSTPNSTK
GIKEKEDKEKTVKEKKEKKEKNPANTPEAKTGGKDKQKEEKPIDGKEKTPKADKDKRKED
KKEEKSKNDGKSAEKERDVSNDSKTKESGKVEKTAGVGGLKSLTPRSDGVESEREQKRRK
VDTHSSPSHSSAVKDNLNDSKDSASKHHPNHTTVLSKSKERDEEKKESEKSRDRSKEREK
KEDRKDRKRDYSNSDREMSQEAKRRKDENGMSSSKHSKSASPSDSPPSNDKDTGKRSKST
AKDKSDLAKPEKTSGGKKESRHDKEKSEKKRESTGAKEDKKHHKSSEKHR
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactgatcctcccgtctgactggctcaaaaactgggacaaatctggcaaaaat
gagtttttacagttttgccaggatcttgcagggaaacccagtattcatgagtttgttaaa
gatctacagacagccttgtatgagctttgctggcatgttatccagggcaatctgaaggtg
gacgtggctgccagtctcctggctgatgttatggaactgcgagatgatctgccatctatt
ttagctgatgttttctgtatattagatattgagactggatgtctagaggagaaacacaaa
cgtgatcattttacccagctggttggagcatgtttgttttgtgttcctgatggggtgcta
aaggagaggttagatccagaaacactggagtctctgggtttgatcaaacaggcacagcag
tttaaccagaagattgtaaaaatcaagaccaaactattttacaaacagcagaagttcaat
ttattgcgggaagagaatgagggttacgctaagctgatcactgagctcggtcaggatctc
tccagcaatctaaccagccacctcgtccttgaaaacatcaaatctttaataggatgtttt
aatctggatccgaaccgtgtgctggacatcatcttagaagtgtacgagtgtcgctctgaa
cacgacgagtttttcgtccccctcattaaatgctacatgtgtgaacatcagaccctctgc
cacatgctcggcttcaagttcaagtttcatcaagaacctaatggagaaacaccatcatct
ttgtaccacgtcgcagctgctcttcttcagcacaacctcatagctcttgaagacctctat
gttcatctcctcccagtagattccaccatagtggaagagcacaagagagtgatcctggag
gccaaacagatcgcccgcaaactcaccatggtggtcgtcccctccgaaaagagcgatgac
aaggagaaagagaaggaaaaggaagaggaaaagaatgagaagcctcctgataaccagaag
ctgggattgctggaggctctgctgcagatcggtgactggcagcacgctcagagcatcatg
gatcagatgccagctttctatgccacctcccacaaggccatcgccatcgcattgtgccaa
ctgctgcaccgcaccgtggagccgctgtaccgcagggctggtatgcccaaaggtgccaaa
ggtggtttgatggcacctctccggaacaaacaggcaccgcaaccggccgaaagcttcgat
gacctatccaaagacgttttcatcatgctgtgctatttgggtcctcatctgtcccatgac
cccatcctatttgcaaagatcgtgcgactgggcaagagtttcatgaaggagtaccaaagt
gaaagcaggcaggacaccaaggacaaaatggactctctgctgagctgttttctcagtatt
gctgatcaggtgttgttgccgtctctgtcgctcatggagtgcaacgcctgcatgtcagag
gagatctggggcttcttcaaacttttcccctatcaatacaggtatcggctgtatggacag
tggaagaacgacacgtacggcaatcatccgctcttggtgaagatcaaggctcagacagta
gacagagcaaaatacatcatgaagcgactgactaaagagaacgtgaagccttcaggaagg
cagattgggaagttaagccacagtaaccccaccattctctttgattacattctctcacag
attcagtggtacgacaacctcataactccagtggtggactctctcaaatacctcacgtct
ctaaactacgatgtgctggcttattgcattattgaagctttagccaacccggagaaagag
aagatgaagcacgatgacaccaccatttcatcatggctgcagagtcttgctagtctttgt
ggagccgttttccggaagtatcccattgagttggctggtcttttgcagtatgtgaccaac
cagctgaaagcaggcaagagttttgaccttctgatcctgaaggaggtggtacagaagatg
gcaggcattgagatcacagatgaaatgactgtggagcagctggaggccatgacaggtgga
gaacagctcaaagccgagggtggctactttgggcagataaggaacacaaagaagtcatct
cagcgtctgaaggatgctcttctggaccatgagctggccctgcctctctgtctgctgatg
gcccagcagaggaatggcgttgtcttctcagaagggggagagaaacatctcaaactcgtg
ggcaaactttatgatcagtgtcacgacagtcttgtgcagtttggtggcttcttggcgtct
aacctcagcacagaagactacatcaagagagtaccgtcagtcgatgtcctctgtaatcag
tttcacacgccacatgacgcagccttcttcctgtctcggcccatgtacgcccatcagatt
ctgtccaagtatgacgaactgaagaaggcagagaagggcaacagtcagcagaagaaggtg
cacaagtacatagcggcttgcgagcaggtcatggcccccgtgcacgaggccgtcgtgtcc
cttcatttgccgaaagtgtgggatgatctgcgaccccagttctacgccacgttttggtcc
ctcaccatgtatgacctggctgtacctcacaatgcctatgatcgggaggtcaacaagctc
aagttgcagatcaaggccattgaagaaaacacggagatgccaatgaacaaaaagaagaaa
gagaaggagcgttgcacagcactacaggacaagttgcaggaggaggagaagaaacagctg
gagcacgtgcagagggttcttcaccgccttaaactggagaaagacaactggttactggcc
aaatccactaagaacgaaaccatcaccaagttcctgcagctttgcattttcccccgctgc
gtattctcggccattgatgccgtctattgcgctcgcttcgttgagctggtgcaccagcaa
aagacacccaacttctgcaccctgctctgctacgacagggtgttttctgacatcatctac
acggtagcgagctgcacagagaacgagtcgcggcgctacggccgtttcctgtgctgcatg
ttggagacggtgactcgatggcatagtgacagggctgtctatgagaaggagtgtggcaat
tatccagggttcctgactattttccgggccagtggttttgatggcgggaacaaagcggat
cagctggactatgagaactttcgacatgttgtccacaaatggcattacaaattgactaaa
gcatcagttcactgtctggagacgggcgagtacacccacatccgtaacatcttgattgtc
ctcaccaagatcctgccctggtaccccaaggtgctgaatctgggccaggcgctggagtgc
cgcgtccacaagatcttccaggaagagaaagagaagaggcccgatctctatgcgttagcc
atgggctactctgggcaattgaaaggcaggaaagtgcacatggtgcctgaaaatgagttt
caccataaggagcagccagtgcgcagcgccacgcctggcaccgtacagaacggacctggc
aacaccggcaagacttccgccactacagctgccagcgctggcaaaactgaggagggggcc
atcgaggactcagataaatccaaggagaaatcgcaggcggcgcagaaaactgccagcaaa
accagcagcgctgcaaacaaagcgagcagcaacggaggcagcacgcctaacagcactaaa
gggatcaaagagaaggaggataaagaaaagacagtgaaggagaagaaggagaaaaaggag
aagaacccagcaaacactccagaggccaaaacaggagggaaggacaaacagaaggaggag
aaacccatcgacggcaaagagaagacgcccaaggctgataaggacaagaggaaggaggac
aagaaagaagagaagagcaagaatgatgggaaatctgcggagaaagaacgtgacgtgtcc
aacgacagcaagacaaaggaaagcggcaaggtggagaagaccgctggggtcggaggtctg
aagtctctcacgcccagatctgatggggttgaatctgagcgggagcaaaaaagacgaaag
gttgacacgcactcgtcaccgtcgcactcctctgcagttaaggacaatctcaacgactcc
aaggactccgcatcaaagcatcaccctaaccacaccacagtcctgtccaagagcaaagag
agggacgaggagaagaaagagtctgagaaatccagggaccgctccaaagaaagggagaag
aaagaagacaggaaggatagaaaacgagactactccaacagcgaccgcgagatgagccag
gaagccaagcgccgcaaagatgaaaatggaatgagctcatccaaacacagcaagagcgcc
agcccctccgattcgccgccctcaaacgacaaggacaccggcaaacgctccaagtccacc
gccaaggacaagagcgatctggccaaaccggaaaagacctcgggaggcaaaaaggagtct
aggcatgacaaagagaaatcagaaaagaagagagagagcaccggcgctaaagaggacaag
aaacaccataaatcatcagaaaagcacagataa
DBGET
integrated database retrieval system
