Paramisgurnus dabryanus (large-scale loach): 135749449
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Entry
135749449 CDS
T10799
Symbol
pcdh12
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pdab04515
]
135749449 (pcdh12)
Cell adhesion molecules [BR:
pdab04515
]
Cadherins
Protocadherins
135749449 (pcdh12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
135749449
NCBI-ProteinID:
XP_065124110
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All DBs
Position
16:7460970..7472573
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AA seq
1184 aa
AA seq
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MKQETSHTVMLQVLLLLATLFECPPCNAHPIDSTPHIIQYSVWEEQPSGTRVGRLLDDLR
QRGDKGSLENFQLVHRGPNLPLTVSARDGTVSTLGRLDREELSELNFSVLYKRSGVMHLL
SVHVEIMDLNDHSPVFPSRVQEVEISETAALKMRIPLDRAVDPDAGPNGLQTYSLSSNQH
FALDVHTAGGSKQAELIIIKELDREMQPSLELILTAWDKGNPPKSGSTKIRVTILDSNDN
SPVFEDAPPVIELAEDSVLGTIVIHLRATDPDQGANGEVEYFISKHVPSDVQKLFSIHPK
TGALTLQGPLDFEEKNIYEVDIQARDLGPNANPSHHKLQVKLQDVNDNAPRIHITWTPPD
SPIATVLEGAPNETFLALVMVSDADSGPNGLVQLRILNGPSAFRLKQIHGDNYMIVTNHT
LDREKQMEYNLTLQAQDSGDPSLSCIKHLTVHVLDENDNAPIFTKSQYRSKVKENNIPGF
HFLSVEAHDVDLDLSGKMSFSIRESNELGTPSALFSVHPSSGAVTAQQSLDFEESRSYSF
IVEAVDRGYPPMTSSATVLVEIQDVNDNYPIIHEPLPKNGVAVLSVPVKVDNGEIVTELG
EEAVEDNFDKLRNHSFHNKLDGFLATTIRASDPDSGINGRLHFRITDGNPSNTFILDKTN
GQLFVNTTNATELIGKTFKLDIVVSDMGTPVLTTKTTLEITFINFRDHLKNLSHDNQAQF
SLTMLLAICLGSICLFLLITVFLAKTFCHPHKRDNHAYNCRQAESTYTRHPRRPQKHIRK
TDIQLVPVLRGRKETPPADEAEAMSSTAPLMETYPQGQFNLTPTLARMAQNQCHSETDGS
LPLTPSKILRKPGNIEWNGTLPCNPETSYRTLHKTRNSSSSSFSNSQTGTLKRHRNEQVN
SPTVDSSRTATSVSSDQATLRKPKTTERKGRMEESDHRQILRNLVRLSMAAFAENGSIEL
SSASPEVQQVSQLLSLLHQGQLQPRPNFRGNKYSHRTGRLVPQDADWLSTKDSGHGESEM
GDIDWETGRDSPVDTLYEEGLNNLLNSDDVFSDIPDPAWIARLSLPLTTDYHENLFVPDG
PPSPEGHCPVVTPDDSTSFSTFGKTPEKTPVLDSRALMSEVSSLFEMLLTKKADAQSCPP
AEVLYRLSAAYRRSLGLDASANGGAASTRHQGSTPMMQCTNPTP
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaggaaacctcacacacagtcatgcttcaggttttactccttctggcaactctt
ttcgagtgcccaccctgtaacgcccaccctatagattctactccccacattattcagtat
agtgtttgggaagagcagccctcagggacaagggtgggtcgcctcctggatgacctgcgt
cagcgtggtgacaaggggtcattggaaaacttccagcttgtacaccgtggacctaactta
ccactcacagtttctgcaagggatggtactgtgtcaacactaggtagactggaccgtgaa
gaactttctgaactgaattttagtgttctatacaaaagaagtggtgtcatgcacctcctt
tcggttcatgtggagattatggacctaaacgatcacagcccagtttttcccagtcgagtg
caggaggtggagatctctgagacagctgcactaaaaatgcgtatccctctggatcgtgcc
gtagatccagatgctggacctaatggcctacagacctactccctctcctccaaccagcat
tttgctttggatgtccacaccgctggtgggagcaagcaagctgaattaatcattatcaag
gaattagacagagagatgcagccatctttagaattgattttaacagcctgggacaaagga
aacccgcccaagtcaggtagcacaaaaatcagagtaacaattctggactccaatgataac
agtccggttttcgaagatgctccgccagtgatcgagctggcagaggactcagtccttgga
acgattgtcattcatctccgtgccacagaccctgatcaaggtgcgaatggggaggttgag
tacttcattagtaaacatgtcccatcggatgtgcaaaaacttttcagcatccatcccaaa
acgggtgctttgactttacaaggtcctttagattttgaagaaaagaacatatatgaggta
gacatccaagctcgagaccttgggcccaatgctaatccatctcatcacaaactgcaggtt
aaattgcaagacgtcaacgataatgctccacggatccacataacatggactcccccggat
tcgcctatcgcaactgttttggaaggagcaccaaatgaaacttttcttgctcttgtgatg
gtatctgatgctgattcagggcccaatgggcttgtacagttacgcattctgaatggaccg
agcgccttccgactcaagcaaatccatggggacaattacatgattgtaaccaatcacact
ctggatcgagagaaacagatggagtacaaccttacacttcaggctcaagatagcggggat
ccctctctctcctgcattaagcacctgactgtccatgttttggatgaaaatgataacgca
cccattttcaccaaaagtcaataccgtagtaaagtcaaagagaacaatattccaggtttt
catttcttaagtgtggaggcccacgatgttgacttggatctcagtggaaagatgtcattc
tctataagggagtcaaatgaattggggacaccatcagcacttttctctgtgcacccatca
agtggggctgttactgctcaacagtcattagactttgaggaatcccgctcttactcattt
attgttgaggctgtagatcgaggatacccaccaatgaccagcagtgcaacagtgctggtt
gagatacaggacgttaatgacaattatcccataatccatgagccactacctaagaacgga
gtcgcagtgctaagtgtcccagtgaaagttgacaatggggaaattgtgactgaacttgga
gaggaagctgttgaggataactttgacaaactgagaaatcattctttccataacaaactc
gatggttttctggccaccaccatccgggccagtgatcccgattctggaattaatggaaga
cttcattttaggataacagatggaaacccatctaacacattcattctggataaaactaat
ggacagctgtttgttaacacaactaatgccacagaactgattggtaagacttttaaactg
gacatcgtggtatctgatatgggaacacctgtgctaaccacaaaaactactttagaaata
acttttataaactttcgtgaccaccttaagaacttgtctcatgataaccaagcccagttc
agtttaacaatgcttttagccatctgcctgggatcgatctgcctgtttttactcataaca
gtttttttagccaaaacattttgtcaccctcacaaacgagacaaccacgcttataactgt
agacaagctgaatcgacctacacccgtcacccacgacgtcctcagaagcacattcgcaag
accgacatccagttggtaccagtgctgagaggacgtaaagaaactccacctgcagatgaa
gctgaagcaatgtcctctacagcgcctttaatggaaacatatccacagggccagtttaat
cttacgccaaccctcgcccgcatggctcaaaatcaatgtcattcagaaactgatgggagt
ttaccgctcactccgagcaagatcctcagaaagcccggtaacatagaatggaacgggaca
cttccttgtaacccagagacatcatatcgaaccttgcacaaaacaagaaattcctcctcc
tcatctttctcaaactctcaaaccggcacactcaaacgccaccgaaatgaacaagtcaac
agcccaaccgtggattcctcaagaactgcaacttcagtgtccagtgatcaggccacatta
cggaaaccaaagaccactgaaagaaaaggaaggatggaggagtcagaccacaggcagatc
ctgaggaacctcgttcgactctcaatggcagcttttgcagagaacggttctattgaattg
tcttctgcctcacctgaggtgcagcaagtgtcacagctcctgtcactattgcatcagggt
cagcttcaacctcgaccaaattttcgtggcaacaagtattctcaccgaactggacggtta
gtacctcaggacgctgactggttgagcactaaggacagtggtcatggtgaaagtgagatg
ggtgatatagactgggaaaccggtagggattcacctgtggacacattatatgaagaaggc
ctcaataatctgctgaattctgatgatgtgttctcagacattcctgatccagcatggata
gctcggctatctcttcctctgacgactgactaccacgaaaacctgtttgtgccagatggg
ccaccgtctcctgaaggccactgtcctgtggtcactccggatgactctacttccttctcc
acctttggtaaaaccccagagaagacccctgtgttggatagcagagctctgatgtcagag
gtcagctctctttttgagatgctcctgacaaagaaagccgacgctcagtcgtgtccacct
gctgaggtgctctacagactttcagcagcttataggcggtcgctcggcttagacgcatct
gccaacggcggagctgcctccacgcgtcaccaagggtcaactcccatgatgcaatgcaca
aaccccacaccttaa
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integrated database retrieval system
