Paramisgurnus dabryanus (large-scale loach): 135749689
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Entry
135749689 CDS
T10799
Symbol
cpdp
Name
(RefSeq) CPD photolyase isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdab03400
]
135749689 (cpdp)
Enzymes [BR:
pdab01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
135749689 (cpdp)
DNA repair and recombination proteins [BR:
pdab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
135749689 (cpdp)
Prokaryotic type
135749689 (cpdp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
135749689
NCBI-ProteinID:
XP_065124397
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All DBs
Position
6:complement(16810740..16818722)
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AA seq
574 aa
AA seq
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MRPPDAAALRFRNGYQSGQVYRKLAKGLNRLLLFSSCFRYSRRVLLGTIRGPNTLLQNNI
TMSVNKPKRKRESPTSKDVKKPKLTAEKRPRESGWLEREVAQLRREAQGCEFNKKRLRYL
SDCQKIKQKSDGVLYWMSRDQRVQDNWALIYAQQLALDENLPLHICFCLVSRYMDAAYRQ
YAFMLKGLREVAKECKGLDIQFHLLSGEPGHTLPTFVKKFNFGAVVTDFNPIRISLQWNE
AVKKDLPSDIPFIQVDAHNVVPCWEASGKLEYGARTIRGKITNLLSEFLTEIPPVDTHPY
AASHTAEPIDWEKVLSSLEVDRSVGEVDWAQPGTSGGMAMLESFIDQRLRLFATKRNDPN
SDAVSNLSPWIHAGQLSAQRVVRQVKREKGFSESVASFTEELVVRRELADNFCFYNPNYD
NISGAYDWAKKTLQQHAKDRREYVYNKEQLENAKTYDQLWNAAQRQLVQEGKMHGFLRMY
WAKKILEWTASPEEALSIALYLNDHYSLDGCDPNGFVGCMWSICGIHDQGWAERPIFGKI
RYMNYAGCKRKFDVAQFEKKYAATETSRKHKKSP
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctccggacgctgcagccctcagatttagaaacggctatcaaagtggtcaagtc
taccggaagttagcaaaaggattaaatcgcttactattgttttccagttgcttcaggtac
agcagaagagtgttgctaggtaccatcagaggcccaaacacactacttcaaaataatatc
accatgtctgttaacaaacccaagcgtaagagagagtcacccaccagcaaggacgtaaag
aaaccgaaactcacagcggagaagaggccgagagagtccggctggttagagagggaagtg
gctcagctccgcagagaagctcagggatgcgaatttaataagaagcgactccgatattta
tctgactgtcagaaaatcaagcagaaatctgatggggtactgtactggatgtcaagagat
caaagagtacaagataactgggctctgatatatgctcagcagctggccctcgatgaaaat
cttcctctgcacatctgcttctgtctggtttctcgatatatggatgcagcttaccgacag
tacgcctttatgttgaaaggacttcgagaagtggcaaaggaatgcaaaggcctggatatt
cagttccacctactgtcaggagagcctggacacacactgccaacttttgtgaaaaaattt
aactttggggcagttgtgactgactttaacccaatcagaatctctcttcagtggaatgag
gcagttaaaaaggaccttccctccgatatacctttcattcaggttgatgcacataacgtg
gtaccatgctgggaggcatctggaaagctggaatatggagccaggactataagggggaaa
atcaccaatcttctttcagaattcctcacagagatcccacctgtggacacgcacccgtac
gccgcttctcatacagcagagccgatagactgggagaaggtgctgtcgtctcttgaagtg
gatcggagtgttggcgaggtagactgggcccagcccggcacctctggtggtatggccatg
cttgagtccttcattgatcagcgactgcgtctgtttgccaccaagaggaacgatcccaac
agtgatgctgtcagtaatctctcaccctggatccacgcaggtcagctctccgctcagcgt
gtcgtgaggcaggtcaaacgagagaaaggctttagtgagtcagtagcctcatttacagaa
gagctggtcgtgcgacgggagctcgctgacaacttctgtttttacaatcccaactacgac
aacatatcaggtgcgtatgattgggcgaagaagactttgcagcagcatgccaaagatcgt
agagagtacgtttacaacaaagagcagctggagaacgccaaaacgtatgatcaactgtgg
aatgcagcacagcgacagctggtgcaagaaggaaagatgcatgggttccttcgcatgtac
tgggcaaagaagatcctggaatggactgcgtcccccgaagaagccctctctattgcttta
tacctgaatgatcactattctttagacggatgtgatcccaacggatttgtgggttgtatg
tggtctatctgtggcattcatgaccagggttgggcagagagacccatttttgggaaaatc
cgttacatgaattatgctggttgcaagaggaagtttgatgtagcacagtttgagaagaag
tatgctgccactgaaacttccagaaaacacaagaaatccccatag
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