Paramisgurnus dabryanus (large-scale loach): 135749895
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Entry
135749895 CDS
T10799
Symbol
sec22ba
Name
(RefSeq) vesicle-trafficking protein SEC22b-A
KO
K08517
vesicle transport protein SEC22
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04130
SNARE interactions in vesicular transport
pdab04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
135749895 (sec22ba)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
135749895 (sec22ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdab04131
]
135749895 (sec22ba)
Membrane trafficking [BR:
pdab04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
135749895 (sec22ba)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Sec20
IMD
DUF7515
Motif
Other DBs
NCBI-GeneID:
135749895
NCBI-ProteinID:
XP_065124652
LinkDB
All DBs
Position
6:16991710..16993662
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AA seq
215 aa
AA seq
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MVLLTIIARVADGLPLAASMQEDDQSGRDLQKYQSQAKQLCRKLNEQSPARCTLEAGTMC
FHYAIEKGVCYLVLCEAGFPKKLAFAYLEDLVGEFNEQYGIKVSSVSRPYSFIEFDTYIQ
KAKKSYVDSRARRNLGNINTELQDVQRIMVANIEEVLQRGEALSALDSKAANLSSLSKKY
RSDAKYLNTRSTYAKVAAGSVIFITLLVYVRFWWL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgctgacgataattgctcgagtcgccgacgggttgccacttgctgcatctatg
caagaagatgaccagtctggacgagacctacagaagtatcagagtcaagccaagcagctt
tgtcgaaaactgaatgaacagagtcctgcacgatgtactttagaggcaggtaccatgtgc
tttcactatgccattgagaaaggagtgtgttacttggtcttatgtgaagcaggattccca
aagaaactggcatttgcctatctagaggatcttgtgggagaattcaatgagcagtatggg
ataaaggtctcatcagtatcacggccatactcttttattgaatttgacacatacatacag
aaggccaaaaaatcttacgttgacagcagagcacgaagaaatttaggcaacatcaataca
gagttgcaagacgtccaaagaattatggttgccaatatagaagaggttctccagcgtggt
gaagccttgtctgctttggattccaaagctgctaacctgtccagtctgtcgaagaaatac
cgcagcgatgccaaatatctcaacacacggtccacctatgctaaagtagccgccggttct
gtcattttcattacactccttgtctatgtacgattctggtggctgtga
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