Paramisgurnus dabryanus (large-scale loach): 135750366
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Entry
135750366 CDS
T10799
Name
(RefSeq) transcription factor Sox-9-A-like
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135750366
Transcription factors [BR:
pdab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135750366
SSDB
Ortholog
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GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
135750366
NCBI-ProteinID:
XP_065125242
LinkDB
All DBs
Position
3:48905449..48908403
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AA seq
461 aa
AA seq
DB search
MNLFDSYVKMSDEQDKSLSDAPSPSMSEDSAGSPCPSGSGSDTENTRPEQNLREFKKDEE
GKFPVCIRDAVSQVLKGYDWTLVPMPVRMNGSSKNKPHVKRPMNAFMVWAQAARRKLADQ
YPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQ
TESEDGEQTHISPNAIFKALQQADSPASSMGEVHSPADNSAGQSQGPPTPPTTPKTELPT
SKVDLKREGRPLQEGIDFGAVDIGELSSDVISNMEPFDVNEFDQYLPPQGHPGIAVTNAA
QSYSTGYGLNSQAVGATAHSWMSKQQQQHSLNTIASGGEPGQGHQRTQIKTEQLSPSHYS
EQQGSPQHVAYGSFSLQHYSTSYPSITRTQYDYADHQNPANSYYSHSGQASSLFSTFSYM
SPSQRPMYTSIADTTGLPSVPQAHSPQHWEQQPVYTQLSRP
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcttcgactcctacgtcaagatgagcgacgagcaggacaagagtctttccgac
gcgccaagcccgagcatgtccgaggattctgctggctctccgtgtccgtccggatcagga
tcggataccgagaacacccgacccgagcagaacctgagagagttcaagaaagacgaggag
ggaaagttccctgtgtgcattagagacgcagtttcgcaggtcctgaagggttatgattgg
accctggtgcccatgccggtgcgaatgaacggctccagcaagaacaaaccgcacgtgaaa
agaccaatgaacgcgtttatggtttgggctcaagctgcgcgcagaaaactggcagatcag
tatccgcatctgcacaatgccgaactcagcaaaaccctcgggaaactctggagactactg
aatgagggagagaagcgcccatttgtagaggaggctgagcgccttagggtccagcataaa
aaagaccaccctgactacaagtatcagcccagacggagaaaatctgtgaaaaacggacaa
actgagtctgaggacggtgagcagacccatatctctcccaatgccatctttaaagccctg
caacaagctgattctcctgcttccagcatgggtgaagtgcattcaccagcagacaattca
gccggtcagtcccaaggccctcccacacctcccacaacccccaaaacagagctgccgacc
agcaaagtagacttaaaacgtgagggccgtcccctacaagagggcattgactttggagct
gtggatatcggtgagctgagcagtgatgtcatctctaacatggagcctttcgatgtcaat
gagtttgaccagtacctgcctcctcagggacacccagggattgcagtcaccaatgctgca
cagtcatattctacaggctatgggctcaacagtcaagctgtgggagctacagcgcacagc
tggatgtccaaacaacaacagcagcattcgctgaacacaatagccagtggtggtgagcca
ggtcaaggccatcagagaacccagatcaagacggaacagctgagtcccagccactacagt
gaacagcagggctccccacagcatgtggcctatggctcattcagtctgcagcactatagc
acctcatacccctctatcacccgcacacagtacgattacgcagaccaccagaatcctgcc
aactcttactatagtcattcaggtcaggcctcaagcctcttttctacttttagctacatg
agtcccagccagaggcccatgtacacctctattgccgacacaacaggcctcccgtccgta
ccacaggcacacagtccacagcactgggagcaacagccagtctacacccagttgtccagg
ccataa
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