Paramisgurnus dabryanus (large-scale loach): 135751884
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Entry
135751884 CDS
T10799
Symbol
rorc
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135751884 (rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pdab03310
]
135751884 (rorc)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
135751884 (rorc)
Nuclear receptors [BR:
pdab03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
135751884 (rorc)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
135751884
NCBI-ProteinID:
XP_065126256
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Position
13:24429962..24465830
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AA seq
508 aa
AA seq
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MENDEPESPDLSPANTLSRRGTPGPKKSHLTQIEVIPCKICGDKSSGVHYGVITCEGCKG
FFRRSQSSSVQYSCSRQSNCPIDRASRNRCQSCRLKKCVAQGMSRDAVKFGRMSKRQRDS
LIAEVERHRQQQRLQANSIQEPQSLLAYRPGKEPREQSSHLIPPLSSPYHYSPIEPDLSG
CPVEVHPYPGCHVADSHAAGLAYKVTHKKGESFNLLTGRGVDSTRSTPEAILNMPGSEMR
FQPFDPESSFFSYPTSLHIEELCASILRSHRETTQYRPEELQGLRWKVFSREEIHAYQSK
SVDEMWQHCAVRLTDAVQYVVEFAKHIPGFRQLCQNDQIALLKSGSMEVVLVRMSRMFNT
ENNTVFFDGKFAGTELFKSLACSDLIANVFDFAHNLCMLRLTEQQMAVFSALVLLNADRP
CLENRERVQRARRDVELALNHILHRDNQETLLHKLYQRMPLLKSLCLLHIEKLRWFRQLY
PLTVHSLFPPLYKELFGSDTDIQTLATH
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgacgaacccgaatcaccggacctgagccctgccaacactctgagtagacga
ggaactccagggcctaagaaatcccatttgactcagatagaagtgatcccatgtaagatc
tgtggagataagtcatcaggtgttcattatggagttattacctgtgaaggttgcaagggg
tttttccgcagaagtcaatcctctagtgttcagtactcgtgctccaggcagagtaactgc
cccatcgatcgcgccagccgcaaccgctgccagagctgccgactcaagaaatgtgtcgct
cagggcatgagccgtgatgctgtgaagtttggccgcatgtccaagcgtcagagagattca
ctcattgcagaagttgagagacacagacagcagcagcgtcttcaggctaactctatccaa
gaaccgcagtctcttctagcctaccggcccggcaaagagcccagagaacagtcatcccat
ctcatcccccctctctcctcaccataccactattcccctattgagcccgacctgtcaggt
tgcccagtagaggttcatccttatccggggtgccacgtagctgattcccatgctgcaggt
ctggcctataaagtcacccacaagaagggtgaaagctttaacttgttaactgggagaggg
gttgactccacaaggtctacaccagaagccatcttaaacatgccaggcagtgaaatgagg
tttcaaccttttgacccagagagctcattcttttcctacccgacctctctgcacatagag
gagctatgtgcaagtattttacgttcccacagagagacgactcagtatcgtccagaggag
ctgcagggtctcagatggaaggttttcagcagggaggagatccatgcctaccagagcaag
tcagtggatgagatgtggcagcattgtgcagtacggttgaccgatgccgttcagtacgtg
gtggagtttgccaaacatatcccgggattccgtcagctctgtcagaatgatcaaatcgct
ctgcttaaaagtggatctatggaggtggttttggttcggatgagtcggatgtttaacaca
gaaaacaacacagtattttttgatggcaaatttgctggaacagaacttttcaagtctctc
gcatgtagtgatctaatagcgaacgtgttcgattttgctcacaatctgtgtatgctgaga
ctgacagaacagcagatggcagtgttttctgctctcgtcctcctcaatgcagatcggccg
tgtctggaaaacagagagagagttcagagagcacggagagatgtggagcttgctcttaat
cacattcttcatagggacaatcaggaaactctgctgcataagctgtaccagaggatgccg
ctgctgaagtctctgtgcttgctgcatattgagaaactgcgatggtttcgtcaactgtat
ccgctcactgtacattcactctttcctccgctatacaaagagctgttcggctccgacaca
gacatccagacactggctactcactga
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