Paramisgurnus dabryanus (large-scale loach): 135752037
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Entry
135752037 CDS
T10799
Symbol
csgalnact1b
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pdab01100
Metabolic pathways
Module
pdab_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
135752037 (csgalnact1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pdab01003
]
135752037 (csgalnact1b)
Enzymes [BR:
pdab01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
135752037 (csgalnact1b)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
135752037 (csgalnact1b)
Glycosyltransferases [BR:
pdab01003
]
Glycan extension
O-Glycan
135752037 (csgalnact1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
SCO1-SenC
Motif
Other DBs
NCBI-GeneID:
135752037
NCBI-ProteinID:
XP_065126433
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All DBs
Position
11:1635691..1638536
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AA seq
504 aa
AA seq
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MFKRWRFVLTLLAGFVLLLLCTHHHPPQSCSRNPAAEVSYETLLHQHEERYLQLSTNLTK
QISQLKKDLREKSRQLQRSAVIFSLDPEEKTHSDLERFLQNQLKRAETGSGERVSDEFSV
VPFESFTLHRVYQLETGLSRHPVERPIRPDRRSELDGVLESALHVLNDHQPGDSQHRRSY
SPKDFFEGIFRTERDKGTLYDLVFGENISPDFRRLIFFRPFAPLIKVTDEFIDTSQILIN
IIVPLTNQLEIFRRFMQNFSKVCIRQEERTHLTVVLFGSEKMDEVKGILDEISRTMKYRN
FTLIHLNEEFSRARGLEVGVGAWTHSNVLLFFCNVNVHFTAEFLSSCRINAAAGQKVFYP
VMFSQYNPEVIYGHNVPPPPPHEEQLVVRKDFGFWKDFDFGMTCQYRSDFLKMGGFDVPV
KGRDTEDTHLYRKYLQSRLKVIRAPSRGLFHVWTEILCSEDLSTDSFKFCLWSKAMNEAS
LAQMADLLFQQQINNHLQKHNKQI
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagagatggaggtttgttctcacactgctcgccggctttgtgctgctcctgttg
tgtacccatcatcatccacctcaatcctgctcaagaaacccagcggctgaagtttcatac
gagactttactgcaccagcacgaggagcgataccttcagctctccaccaacctcaccaaa
caaatctctcaactgaagaaagacctgcgggagaagagcagacagctacagagatctgct
gtgatcttctcactggatcctgaagaaaaaacccattcggatctggaacgcttcctacag
aaccagctcaaaagggctgagacgggttcaggtgagcgagtatctgatgagtttagcgtg
gtgccgttcgagagcttcactcttcacagggtttatcagctggagacgggactatcacga
caccccgtggaaagacccatcagaccggaccgcaggagtgagctggacggagtgttagag
agcgccttacacgtgctgaatgatcatcagcctggagactctcaacacagaagatcttac
tctccaaaagatttctttgagggaatctttcggacagaaagggataaaggaacgctatat
gatctggtgtttggagaaaacatctctccagacttcaggaggctcatcttctttcgtcca
tttgcaccgttaataaaagttacggatgaatttattgacacatcccaaatccttatcaat
attattgtaccgctgacaaaccaactggaaatattcagacgatttatgcagaatttcagt
aaagtttgtattcgtcaagaagagaggacgcatcttaccgtggtattatttggttctgaa
aagatggatgaagtgaaaggaattctggatgaaatatcaaggacaatgaaatacaggaac
tttactctgattcatctgaatgaagagttttccagagctcgagggctggaggttggagtt
ggcgcatggactcacagtaatgtcctcctcttcttctgtaatgtaaacgttcacttcact
gccgagttcctgagctcctgtcgaatcaatgcagcagcaggtcaaaaggttttctatcca
gtgatgtttagtcagtataatccagaggtcatctatggtcataatgttcctcctcctcct
cctcatgaagaacagctggtggtcaggaaagattttggattctggaaagattttgatttt
ggaatgacgtgtcagtacagatcagattttttgaagatgggtggattcgatgtaccagta
aaaggcagggatacagaagatacacatctctataggaaatatctgcagagccgtctgaag
gtgattcgagctccatcacgcggtctctttcatgtgtggactgagattctctgttctgag
gatttatcaacagactcttttaaattctgtttgtggtccaaagctatgaatgaggcgtct
ctcgctcagatggccgatctgctcttccaacaacagatcaacaatcatctacagaaacac
aacaaacagatttga
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