Paramisgurnus dabryanus (large-scale loach): 135752136
Help
Entry
135752136 CDS
T10799
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04621
NOD-like receptor signaling pathway
pdab05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
135752136 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135752136 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pdab04054
]
135752136 (nod1)
Pattern recognition receptors [BR:
pdab04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
135752136 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_6
LRR_4
NOD2_WH
LRR_8
AAA_16
AAA_18
AAA_22
SLFN-g3_helicase
NPHP3_N
NTPase_1
AAA_30
Death_TNFRSF11B
PIF1
Motif
Other DBs
NCBI-GeneID:
135752136
NCBI-ProteinID:
XP_065126587
LinkDB
All DBs
Position
13:931028..944673
Genome browser
AA seq
937 aa
AA seq
DB search
MGSYPVSYVKLLTVHRELLVEQVKNTQCLLDNLHMNNFICTEDIEIIQRSATKTDQVRKI
LELVQSKGEECSEYFIHILYEAYDAYIDLRPWFHDIQYSPSDTIHHIPVVNTDPISKYSE
KLRHELKRDTQFITSYSKREETPLEDLYTDTQMELVNDKGESLGFLQSLDELLGDQGVFN
QEAETIFITGDAGVGKSIVLQKLQNLWSRRELKTRAKFFFKFRCRMFSAFKETDEISLRD
LIFKHNCYPDGDPDNEVFTYILRFPETVLFAFDGYDEIQTDFDLDNVPEVVSPEEKTHPL
LLLMNLLCGKLLNGSRKILTARTGTEVQSRVIRKKVFLRGFSPEHLRTYTALHFPEEEQR
AMVRVQLDANPHLCGLCSIPLFSWIILKSFKHFYSIYDDYKLPDSCITLTNVFLLLSEVF
LGHTTARPGLLKRSTRCPSETFKSGEQKLLAFARLALQGLERGAFLFSIEEVTSCGLDDK
DLQFGFLRPVCHYDTCGSSATFEFLHVTLQAFLASFALVLDTKITPDTILKFFSKCEYKK
KSRLSCLSCLGKSQPRDKDPFQTNEHFQFTNLFLCGLLSKPNAALLEHLVPPLSLNQKRK
TLKSYLSNSVKSHLKDLPRHPAIEIPGYKVHAMPNFLWMLRCIFEINSEKVAKMTANGIS
ADYIKIAYCNIYSADCSALNFVLHHRKKHLGVDMDNNNISDYGVKQLRPSFSKMTVVRLC
VNQLTDDSMEVLANELIRYKVVKILGLYKNHITDVGAKLVAEIIEGCPHLKTVKLGCNKI
TGLGASYLAKGIHKSKSIFDVGMWGNSIGDEGANAFAEALKNHPSLTNLSLSANGITSQG
GKSLANALKESTSLHIFWLIQNQICDDAASDLADAFRSNSSLTHLMLIDNQLSVHGARQI
ADALSNNTTLKEVNIKGNQISKAEEKLFEEEKRLRFH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgggttcttatccagtctcatatgtgaagcttctgacggttcatcgggagcttctggtg
gagcaggtgaagaacacgcagtgtttgctggacaatcttcacatgaacaacttcatctgt
actgaagatatagagatcatacagcgaagtgccaccaaaactgatcaggtgcgtaagatc
ctcgagctggtccagagtaaaggagaagaatgttctgaatatttcatacatattctttat
gaagcgtatgatgcttatattgacctgcgcccatggtttcatgacattcagtacagtcca
tcagatactatacatcacatacctgtggttaacacagatcccattagcaagtacagtgag
aaactcaggcatgagctcaagagagacactcagttcatcacatcatactcaaagcgtgaa
gagacgccgctggaggatctctacacagacacacagatggagctcgtaaacgacaagggc
gagagcctgggctttctccagagtctggatgagctccttggagatcagggggtcttcaac
caggaggccgagaccatcttcatcacgggtgatgctggtgtaggcaaatccatcgttctt
cagaaactccagaatctgtggtccaggagagagctgaaaactcgcgccaagttcttcttt
aaattcaggtgcaggatgtttagcgcctttaaagaaacggatgagatctcattgagggat
cttatcttcaagcacaactgctatccggatggagaccccgacaacgaggtctttacgtac
atcttacgattcccagagaccgtactctttgcgtttgatgggtacgatgaaatccaaaca
gactttgacttggataacgtgcccgaggtggtctccccagaagaaaagactcatccgctt
ttgcttctcatgaatctgctgtgtggaaaactgctgaacggttctcggaaaattctgacc
gcgcggaccggcacggaggtccaaagccgagtgatcaggaagaaggtctttctgagaggt
ttttcacccgagcatctgaggacgtacacggctttgcatttccccgaggaggaacaaagg
gcgatggtgcgagtgcagctggatgcaaaccctcatctctgcggtctctgctccatccca
ctcttcagctggatcattcttaagagtttcaagcatttctattccatctacgatgattat
aaattgccggactcatgcatcaccctcactaatgttttcctgctcctctcggaggtcttt
ctgggtcatacgaccgctcgacccggtctgctgaaacgcagtacgaggtgtccctccgag
acctttaaatccggcgagcaaaagcttttggccttcgctagactcgctctgcaaggtctc
gagagaggtgcatttttatttagcattgaggaggtcacgtcttgcggattagacgataag
gaccttcagttcgggtttctgaggcccgtttgtcattacgatacgtgcggaagctctgcc
acattcgagtttcttcacgtgaccctgcaggcgttcttagccagtttcgctttggtcctg
gacaccaagatcactcctgacactatccttaagtttttctccaaatgcgaatacaaaaag
aagtcccgcctctcttgtttatcttgtctgggaaagtcacaacccagagacaaggatccg
ttccagaccaatgagcacttccagtttaccaatctcttcttatgcggactgttgtccaag
cccaacgccgctcttctcgagcatctcgttccaccgctttcactcaaccaaaagcgcaag
acgctcaaatcctatctgtctaacagcgtgaagtcacacctgaaggatctgcctcggcat
ccagccatagaaatcccgggttataaagtgcacgccatgcccaatttcttatggatgctg
cggtgtatattcgagatcaacagcgagaaagtggccaagatgacggccaacggcatatcg
gccgattacattaagatcgcctactgtaacatttactcagcagactgcagcgctctgaac
tttgtgttacatcatcgtaaaaaacacctgggggtggacatggataacaacaacatcagt
gattatggagtgaaacagctaagaccctctttcagcaaaatgaccgtggtaagattatgt
gtgaatcaactcacggacgacagcatggaggttctggcaaatgagctcatcagatataaa
gttgtcaagattttgggcctttacaagaatcacatcacagatgtcggagccaaactggta
gcagagatcattgaaggatgtcctcacctaaagactgtcaaactcggctgtaacaagatc
acaggtttgggtgccagctatcttgccaaaggaattcacaagagtaaatctatctttgat
gtaggaatgtggggtaactcgatcggtgatgaaggggcgaatgctttcgctgaggcttta
aagaatcacccatccctaacaaacctcagtctctccgccaatggcatcacatctcagggg
ggaaagagtttggcaaatgcactcaaggaaagcacgagccttcatatcttctggctcatt
cagaatcaaatctgtgatgacgcagcgtctgatctcgctgatgcgttcaggtcaaactca
tcgctgactcatctgatgttaatagacaaccagttgagcgttcatggagccagacagata
gctgacgctctctcaaacaacactacactgaaagaagtcaacattaaaggaaaccaaatc
tctaaagcagaagaaaaactctttgaggaagagaagaggcttcgttttcactga
DBGET
integrated database retrieval system
