KEGG   Paramisgurnus dabryanus (large-scale loach): 135752148
Entry
135752148         CDS       T10799                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
pdab  Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pdab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    135752148 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdab03400]
    135752148 (xrcc1)
DNA repair and recombination proteins [BR:pdab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     135752148 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT F5_F8_type_C
Other DBs
NCBI-GeneID: 135752148
NCBI-ProteinID: XP_065126607
LinkDB
Position
13:complement(642811..657037)
AA seq 605 aa
MPEIKVKHVVSCSSEDNTHKADNLLSSDTYRKWKAARPGEKQVSVILQFEKEEQIHSIDI
GNEGSAFVEVLVGHSTSVKDQDFEVLLVTSSFMSPTESRNSTNTNRVRIFSTNQLVKATA
SEKWDRVKIVCTQPYTKTTAYGITFIKFHSPPDGSEEPSTSPAKLTKLGQFRVKDESPSS
GSSIQPGSLFFNRESSSKPPAGLKASPQSSRLSYATAALKTEGPSAQSSSSTGTQQAPVK
RKFEFSKERLDAVGPPSKRPTSSEPTPVTPKSKANTSPSTKPSPAQKTEEKKRESPKSKP
EPKPKAKPAKAVPLNRIMEGVVFVLSGFQNPFRAELRDKAVAMGARYRPDWTSDSTHLIC
AFSNTPKYSQVKAAGGTIVRKEWVLDCHKRKEKIPFKRYLMDGAESSSESDEEEEEESEE
ETKRVVKTPEKRDVTPKKQPIKKEEEEYEASTDEEAQEEDVSGMDTEDELNRVEMERKKK
GSVAEVKDEDPYGGSTDENTDAEEEEDKPIPELPDFLTGKFFYLYGTFPDNQKRLLQRYI
IAFNGAVEDYMSEKVQFVVTSQGWDESFEDALMENGNLSFVKPSWILAINDRQKMLPYQP
YTVVP
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgcctgaaatcaaagtcaagcatgttgtatcctgcagcagtgaggataatactcacaaa
gcagacaacctcttgagctctgacacttacaggaagtggaaagctgcaagacccggagag
aaacaagtttcagtcattcttcaatttgaaaaggaagagcagattcacagtatagatatt
gggaatgaaggttctgcgttcgttgaagtccttgtcggtcattccacatcggtcaaagat
caagattttgaggttctgttggtcacatcgtccttcatgtctcctacagagagtcgaaac
agcacaaacacaaacagggttcgcatcttcagcacaaaccagctggtaaaggccacggcg
tcagagaaatgggaccgtgtgaaaatagtctgtactcagccttacaccaagacaacagct
tatggcatcacctttataaagtttcattcacctccagacggcagtgaagaaccgagcaca
tctccagctaaattaaccaaactgggtcagtttcgagttaaagatgagtctccgtcctct
ggctccagtattcaacctggcagtctgttcttcaatagagagagttcatctaaacctccc
gcaggacttaaagcatctcctcagagcagcaggttgagttacgctacggccgctctgaag
actgaaggtccgtctgctcagagttcgagcagcactggcacccagcaggctcctgtaaag
aggaagtttgagtttagtaaggagcgtttggatgccgtgggtcctccgtctaaacgaccc
acatcatctgaacccacccctgtgacgcctaaatctaaagcaaacaccagtccctccact
aaaccttctccagcccagaagacagaagaaaagaagcgagagagtcccaaatctaagcca
gagcccaaacccaaggccaaaccggctaaagcagtgcctttaaaccgcatcatggaggga
gtggtgtttgttctgagcggctttcagaatccctttcgtgcagaactgagagataaagct
gtggccatgggagctcgatatcgacccgactggacctcagactccacgcatctcatctgt
gctttctccaacacacccaagtacagtcaagtgaaagcagccggtggcacaatcgtcagg
aaagagtgggtactcgactgtcacaaacgaaaagagaagattccctttaaacggtatctt
atggatggagccgagtccagttcagaaagtgatgaagaagaagaggaggagagtgaagag
gaaacaaaaagagtagtgaaaactccagaaaagagggatgtgaccccaaaaaagcagccc
atcaagaaagaggaggaagagtatgaagcttcaacagatgaagaagcccaagaggaagat
gtgtctggcatggacactgaagatgaactgaacagggtggagatggagaggaagaagaag
ggaagcgtcgctgaggttaaagatgaagatccgtacggcggctccactgatgagaacacc
gacgctgaggaagaggaagataaacccatacctgaacttccagacttcttaacaggaaag
ttcttctatctttacggcacatttcccgacaaccagaagagactacttcagcgttacatc
atcgcctttaacggagctgttgaagactacatgagcgagaaggtgcagtttgttgtcacc
agtcaaggatgggatgaatcctttgaagatgcgctgatggaaaatggaaatctgagtttt
gtgaagccctcctggatattggccatcaatgacaggcagaagatgttgccgtatcagccg
tacacagttgttccttaa

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