Paramisgurnus dabryanus (large-scale loach): 135752201
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Entry
135752201 CDS
T10799
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135752201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdab04121
]
135752201
Enzymes [BR:
pdab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135752201
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135752201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
135752201
NCBI-ProteinID:
XP_065126681
LinkDB
All DBs
Position
13:741446..744362
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AA seq
413 aa
AA seq
DB search
MDIMISPHSDNSTRAEDILTEIRVNLLECKVCFESFSVQKRDQTAQNLPCGHVLCLKCVC
TLTHPVHHRLECPFCREVCEAGSTSQCRALVDLQDLLQTQGSRRLPALQQPISWTQGLGS
RALDLYSAFGGWGLIINPCGIAVDESSGEIIVVHDGEKRVAVLSRHGTSIHAFGGYGHGP
ADVCHPLDVAVVSCGHLVITDAGDGTVKVFDSTGCPVLTVRDSFKLPWGVDVDGCGWILV
TDAQMGTLNQLVLDFDRGAVLVNRVVLKDLMCPRSVACDRISGNIAVVEHLEKSGVAHGN
FTPSCLKIYNSDFVLLTVVDSFGLNLMDSVCISISSVVFDRNGDVIVGDTQRGMVWSLGK
PQISAVLTPLVSGLLCPVGLTLTTDNELIVLDSGDHTVKFYTEYTEDLYSESK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggacatcatgatctcacctcacagtgacaacagcacgagagctgaagacatactgaca
gagatacgagtaaacctgctggagtgtaaagtttgtttcgagagcttctcagtgcagaag
agagaccaaacagcccagaatctaccatgtggtcatgtgctctgtctgaagtgtgtttgc
acccttacccatcccgtccatcatcggctggagtgtccgttctgtagggaagtttgtgaa
gccggcagcacatcacaatgtcgagcacttgttgatctccaagatcttctgcagacacag
ggatctcgcaggcttcctgctctccaacaacccatcagctggactcaaggccttggctcg
agagcactcgatctctattcagcgtttggtggctggggtttgatcatcaatccttgtgga
atagctgtagatgaatcttcaggagagattatagtggtgcacgatggtgagaagagggtt
gctgtcttaagtcgacatgggacatccatacacgcttttggaggttatggacatggtcct
gcagatgtctgtcatccgcttgacgtcgctgtggtttcttgtggacacctggtgataaca
gatgcaggtgatgggaccgttaaggtctttgattccacaggttgtcctgtgttgacggtc
cgagactcttttaaactgccgtggggtgtcgatgttgacggctgtggatggatcttggtg
acggatgcacagatgggaaccctgaaccaactggtgttggactttgatcgtggtgcagtc
ttagttaatcgagtcgttctcaaagatctgatgtgtccacggtctgtggcgtgtgacaga
atatcaggaaacattgctgtcgtggagcatcttgagaagagtggggttgctcatggcaac
tttactccatcatgtctaaaaatatataatagtgattttgttcttttaacagtggtggac
agttttggtctgaatctgatggactctgtgtgcatctccatatcttctgtggtttttgac
agaaacggagatgtaattgtgggggacacacagcggggaatggtgtggagtttgggcaaa
cctcagatatcagctgtgttaactccactggtgagtggactactgtgtccagtaggattg
actttaacaacagataatgagcttatagttctggacagtggtgatcacacagtgaagttt
tacactgaatacacagaagatttgtacagtgagagtaaatga
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