KEGG   Paramisgurnus dabryanus (large-scale loach): 135752662
Entry
135752662         CDS       T10799                                 
Symbol
kdm5a
Name
(RefSeq) lysine-specific demethylase 5A isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
pdab  Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:pdab00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pdab01009]
    135752662 (kdm5a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pdab03036]
    135752662 (kdm5a)
Enzymes [BR:pdab01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     135752662 (kdm5a)
Protein phosphatases and associated proteins [BR:pdab01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     135752662 (kdm5a)
Chromosome and associated proteins [BR:pdab03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    135752662 (kdm5a)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_UBR7-like PHD_JHD1 PHD_5 PHDvar_NSD
Other DBs
NCBI-GeneID: 135752662
NCBI-ProteinID: XP_065127225
LinkDB
Position
1:complement(23114360..23128836)
AA seq 1675 aa
MSVFSEFVAPPECPVFEPSWQDFSDPFGFIHKIRDIAENTGICKIRPPQGWQPPFACDFR
SFRFTPRIQRLNELEALTRVKLNFLDQIAKFWELQGCKLRFPHVERKVLDLYLLSKLVSA
EGGFDVVCKEKKWSKISSRMGFPSGKGVPSLLRSHFERILYPYELFRSGASLTGIHRLYP
DVSESEDIDEGIGRGEEEEDEEKETEHRSPRHMKDERENEEPKAMQMFSSSPEVLTLDII
TPDDESFIRKQKHLKAQAYAIKMRPRKEMLEVNYIDLYMCMACGRGDEEDRLLLCDGCDD
SYHTFCLIPPLQDVPKGDWRCPKCVAEECNKPREAFGFEQAVREYTLQSFGEMADHFKSD
YFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDVGSGFPVRDGKKKLFGDED
EYANSGWNLNNMPVLEQSVLTHINGDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINFLH
WGEPKTWYGVPAHAAEQLESVMKKVAPELFHSQPDLLHQLVTQMNPNVLMEHGVPVYRTN
QCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVAHYRRLQRYCVFSHEEL
VCKMATDPESLDVELAAAVVRELSEMMTEETRLRTIVQEMGVLSSEQEVFELVPDDERQC
WKCKTTCFLSALTCACSRERLVCLHHAAELCSCPASEKCLRYRYDQDEFPTMLYGVKSRA
QSYDTWAKRVTEALSGDIKNKKDLIELKVLLEDAEDRKYPENNLFRNLRDTVKEAEMCSS
VAQLLLSHKQKHKRERPESGAQKARSKLTVDELKVFVEQLYRLPCIISQAHQVKELLENV
EDFHERAQAALSDETPDSSKLQALLDLGSGLDVELPELPRLKQELQQARWLDEVRLTLVE
PHRVTLELMKKLIDSGVGLAPHHAVEKAMAELQELLTVSEHWEEKARTCLQARPRHSLVT
LESIVMEAKNIPAYLPNVLALKDALHKAKEWTAKVEAIQNGSNYAYLEQLEGLLARGRSI
PVRLEALPQVESQVASARAWRERTARTFLKKNSTYTLLQVLSPRVDIGVYGTSKSKRKRV
KELLEKDRGLELESLSDLDDGSEETRDPGAVVAAFKAREQQEVDAIHSLRAANLAKMAIV
ERIEEVKFCLCRKTASGFMLQCELCKDWFHGACVPLPKAGTQKKTVAGWQSSSKESKFLC
PLCQRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMGWQDRARQALATDELSSA
LAKLSVLSQRMVELAAREKTEKIINAELQKAAANPDLQGHIQTFQQAGFSRATSPRPSID
YDDEETDSDEDIRETYGYDVKDSGEVKPYLFCDEEIPVKSEEVVSHMWPTTPSFCAEHAY
SSASKSCPQNPTVPRKQPRKTPLVPRSLEPPVLELSPSAKVQLEELMMEGDLLEVSLDET
QHIWRILQATHPPSEDKFLQLMEPDDAPLDKPVKLKVKDIEKKRKRKLERAEQQLLLAAS
GMDGRPKSKDMKRVLDLKPKKKKLKLNPDKSRELKQLAKRLVKEEKERKRKEKAAAKAEF
SKDGLEKKARKILDIPSKYDWSGAEDSNDENAVCAAKNCQRPCKDKVDWVQCDGGCDEWF
HQVCVGVSCEMAENEDYICSACSRKVTTETVVMSSAVCSSQSVPTLPLTDPQESS
NT seq 5028 nt   +upstreamnt  +downstreamnt
atgtcggtgtttagtgagttcgtggctccgccggagtgtccggtgtttgagcccagctgg
caggacttcagcgacccgttcggtttcatccataagatccgagacatcgccgagaacacg
ggaatctgcaagatcagacctccacagggttggcagcctcctttcgcttgtgactttcgc
agtttccgcttcactccccgaatccagcgactcaatgaactggaggctcttacgagagtc
aagctcaactttctggaccagatagccaaattttgggaacttcaaggttgcaaacttcgt
tttcctcacgtagagaggaaagttctggatctctacctgctgagcaagcttgtgtctgca
gaaggaggctttgacgtggtttgtaaagagaaaaaatggtcaaagatcagcagtcgcatg
ggctttccgtccgggaagggagtgccgtctctgctgcgctctcactttgagaggatcctg
tatccgtacgaactcttccggtctggagcgtcattaaccggaattcacagactttaccca
gacgtctctgagtcggaggatatcgatgaaggaattgggcgtggggaggaagaggaggat
gaagaaaaggagaccgagcaccgatctcctcgacacatgaaggatgagagagaaaacgag
gagcctaaagccatgcagatgttcagcagcagccctgaggtgctcacattagacatcatc
acacctgatgatgaaagcttcatcagaaagcagaagcacttgaaggctcaagcgtatgcc
attaaaatgcgtccacgcaaggagatgttggaggtcaattacatcgacctgtacatgtgc
atggcgtgtgggcggggcgacgaggaggaccgcctcctcctgtgtgacggctgcgacgac
agctaccacaccttctgcctgatccctcccctgcaggacgtacccaaaggagactggcgc
tgtcccaagtgtgtggcagaggagtgtaacaagccacgcgaggcgtttgggttcgagcag
gccgtgcgcgagtacacccttcagagcttcggcgagatggcagaccacttcaagtctgat
tacttcaacatgccggttcacatggtgcccactgagctggtggagaaagagttttggcgt
ctggtgagcagcatcgaggaggacgtgatcgtggagtacggcgctgacatcagctccaag
gatgtaggcagtggatttccggtccgggatggaaagaagaaactctttggagatgaggat
gagtacgctaactctggctggaatctgaacaacatgccggtgctggagcagtcggtgctc
acgcacattaatggagacatctcgggaatgaaggtgccctggctgtatgttggcatgtgc
ttctcctcgttctgctggcacatagaggaccactggagttactccatcaacttcctgcac
tggggtgaacccaaaacctggtacggagttccagcgcatgcagccgagcagctggagtct
gtcatgaagaaagttgctccggagctgttccactcgcaacccgacctgctgcatcaactc
gtcacgcaaatgaatccaaacgtcctcatggagcatggcgtcccggtgtatcggaccaat
cagtgcgcaggagaatttgttgtgaccttcccgagagcctatcacagtggttttaatcaa
ggttataactttgctgaggccgtgaacttctgcactgcagactggttgcccatcgggagg
cagtgtgtggctcattacaggcgtcttcagcgttactgtgtgttctcacatgaagagctg
gtgtgtaagatggccaccgacccagaaagcctggacgtggaactggctgctgccgtggtc
cgagagctcagcgagatgatgacggaggagaccagactgagaaccatcgtccaagagatg
ggggtgctctcctcggagcaggaggtgtttgagttggtgccagatgatgagcgtcaatgc
tggaagtgtaagaccacctgtttcctctctgctctcacctgcgcctgcagtcgtgagcgt
ctggtttgtctgcaccatgcagccgagctctgcagctgcccggcgagcgaaaagtgtctc
cggtacagatacgatcaggatgagtttcccacaatgctttatggggtgaagtcacgtgcg
cagtcctacgacacctgggccaagagagtcacggaggcgctatcaggcgatatcaagaac
aagaaagatctgattgagctaaaagttcttctggaggacgccgaggacaggaagtatccc
gagaacaacctcttccgtaatctgagagacaccgtgaaggaggctgagatgtgctcatct
gtggctcagttactgctcagccacaaacagaaacacaaacgagaacgtcctgagagcggc
gcacagaaggcacgaagcaaactgaccgtagacgagttgaaagtgtttgtggagcagctg
tatcgtctgccctgcatcatcagccaggctcatcaagtcaaagagttgctggagaacgta
gaggactttcacgaacgcgctcaagcggctctctcggacgaaactccagactccagtaag
cttcaggctcttttagatctgggctcaggacttgacgtggagctgcccgagctgccgcgt
ctcaaacaggagctgcagcaggcgcgctggctggacgaggtgcgtctgacgctcgtggag
ccgcatcgcgtcacgctggagctcatgaagaagctgatcgactcgggcgtgggcctggcg
ccgcatcacgcggtggagaaggccatggctgagctgcaggagctgctgactgtgtcggag
cattgggaagagaaagctcggacgtgcctgcaggccaggcctcggcacagtttagtgacg
ctggagagtattgtaatggaagcgaaaaatatcccagcatacctgcccaatgtgctcgcc
ctaaaagacgccctgcacaaagcaaaagaatggacagccaaagttgaagccattcagaac
ggcagtaactacgcctacctggagcagttagagggtctgctagcgaggggtcgctccatc
ccggtcagattagaagccttgccacaggtcgagtcacaggtggcctctgccagagcctgg
agggaaaggacggctcgcacgttcctaaagaaaaactcaacctacaccttactccaggtg
ctcagtccacgtgttgacatcggcgtgtacggcaccagcaagagcaaacgcaagcgtgtc
aaagaactgctggagaaagaccgcggcctagagctggaatctctgagcgacctcgacgac
ggctcggaggagacacgtgaccctggtgccgtcgtagccgccttcaaagccagagaacag
caggaagtagatgccatccattcgcttcgtgccgccaacctggccaaaatggcaatagtg
gagcgcatagaagaggtgaaattctgtctgtgtcgtaaaacggccagcggattcatgctg
cagtgcgagctgtgtaaagactggtttcacggcgcttgcgtccccctgcccaaagccgga
actcagaagaaaactgtggcgggctggcagagctccagcaaggagtcaaagtttctttgc
ccgttgtgtcagcgttccaggcgaccgagactggagaccatcctgtcgctgctggtgtca
ctgcagaaacttcccgtgaggctgccggagggcgaggcgctgcagtgtcttacggagaga
gccatgggctggcaagaccgtgctcggcaggccctcgccaccgatgaactctcttctgcc
ctggccaagctgtcggtgctcagccagcgcatggtggagctcgctgctcgagaaaagacc
gagaagattatcaatgcagagcttcagaaggcggcagccaaccctgatttgcagggtcac
atccagacgtttcagcaggctggttttagcagggccacgtcaccacgaccctccatagac
tacgacgatgaggagaccgattcagacgaggacattagagagacctacggatatgatgta
aaggattcaggtgaagtgaagccgtatttattttgtgatgaggaaatccctgtgaaatca
gaggaggtggtcagtcacatgtggccgacgacaccgtctttctgcgcagagcacgcatac
tcatcggcctccaagtcctgcccacagaatcccactgtcccacgcaaacagcccagaaaa
acacccctagtgccccggagcctggaaccaccggtgctcgaactgtcgccaagcgccaag
gttcagctggaggagctgatgatggagggtgatctgctggaggtgtctctggatgagacg
caacacatctggaggattctgcaggctacgcatcctccttcagaagacaagttcctgcag
ctcatggagcctgatgatgctcctctagacaaacctgtcaagcttaaggtgaaggacatc
gaaaagaagaggaagaggaagctggaaagggcagaacagcaacttcttctggccgctagc
ggcatggatggacggccaaaatctaaagacatgaaacgggtgctggaccttaagcccaag
aagaagaaactgaagctcaacccggacaagtctcgcgagctgaagcagctggccaagcgt
ctggttaaggaggagaaggaacggaagaggaaagagaaagctgccgccaaggccgagttc
tccaaggatgggctcgagaagaaggcaagaaaaatcttggatataccatcgaaatacgac
tggtccggcgctgaggactccaatgatgagaacgccgtttgtgccgccaagaactgccag
cggccgtgcaaggataaggtggactgggtccagtgtgacggcggctgtgatgaatggttt
catcaggtgtgtgtcggagtgtcgtgcgagatggcagagaacgaagactatatctgctcg
gcttgctctcgtaaagttaccacagagaccgtagtgatgtcatcggctgtgtgcagcagt
cagtctgtcccgacccttcctctaaccgaccctcaggagagcagttaa

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