Paramisgurnus dabryanus (large-scale loach): 135753576
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Entry
135753576 CDS
T10799
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135753576
04121 Ubiquitin system [BR:
pdab04121
]
135753576
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
135753576
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
135753576
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Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
ZBED1_RNase-like
zf-BED
ZBED1_RNase-like_helical
FAM200-ZBED5_RNase-like
DUF8247
hAT-like_RNase-H
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
135753576
NCBI-ProteinID:
XP_065127620
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Position
13:31679068..31682422
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AA seq
622 aa
AA seq
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MSAAESEEIVNKRGKFSSPVWQFFGYYKSDRSQTNAVCKLCKTVVPAKSGNTTNLMYHLS
RAHPLEHSRIQPTTSVAATPHKQQTTMERYSASVPYGKETKRYKDITEAVAYHIAKDMLP
FSTVEKSGYKKLIHVLDPRYVLPGRKYFSKTAIPKLYVMCKESVQQEILSAKYFATTSDL
WSSRTSEPYISLTIHFIDNEWGLKTRCLETAYFPEDHTGEVIAEGLKEALLSWGLIEDKM
VCITTDSGANVVKATSLNNWTRLQCFGHRLHSAIGAAGKDKRVERAVGVCKKVVSSFSYS
WKKKSALSKAQERLNLPKHQLVTESLTRWGSRQKMVARVLEQQKAITEVLSSDKNNRHLI
PTWQDIDVLESMHAALTPLLEFTDSLSGESYVTVSYVKPVLHLFRSSLLKVNDGDTQLTK
ELKTKIMTYLDEKYADPDTDDLLDMATFVDPRFKGRYIRPGKVGAIQMRAVSEIMDEDQG
QSQAGPSEGAADQGAEGGAVSGPPMPLGVKKQRKSLGSFFKKQCQDDDALPLTEKQKVES
ELERYLMCPDADSESNPLDWWRLHEHNFPRLSQLAKKYLCIPATSTPSERIFSTGGNIVT
CTRAALDPEKVNQLVFLAQNLD
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgcagagagcgaggaaattgtaaataaaagaggaaaattcagctcgccagta
tggcagttttttggatattataagtctgaccgtagtcagaccaatgccgtctgcaaatta
tgcaagaccgtcgtcccagccaagtctggtaataccacgaacctgatgtaccaccttagc
cgcgctcaccctttggagcacagccgtattcaaccaacaacatctgtagctgcaacaccg
cacaagcagcagacgaccatggagaggtactctgcatcagtgccttatggcaaagaaaca
aaacggtacaaagatataacggaggcagtggcatatcatatagccaaagacatgcttccg
tttagcaccgttgagaagtcaggttataaaaagcttatacacgtgcttgacccacgctac
gttcttcctggccgaaagtacttttctaagactgccattcctaagctgtatgtaatgtgc
aaagaatctgtacagcaagaaatattgtcagcaaagtactttgcaacaacctctgacctg
tggtcaagccgtacttctgagccatatattagcttgaccattcacttcatcgacaatgaa
tggggtttgaaaaccagatgccttgagactgcatatttccccgaagaccacacaggagaa
gtgatagcagaaggcttgaaggaggcactgttgtcctggggtctgattgaagacaaaatg
gtgtgcattaccacagacagcggggcaaatgtagtgaaggcgacttcactgaacaactgg
acacggctgcagtgttttggccatcgtttgcactctgctattggtgctgcagggaaagat
aaaagagtggagagggctgtaggtgtgtgcaagaaagtggtatctagcttttcttactcg
tggaagaaaaagagtgcgctctctaaagcacaggaacgtctcaatcttcccaaacaccag
ctggtcacagagtcactaaccaggtggggctcaagacaaaagatggtggcaagggtccta
gagcaacaaaaggccatcactgaagttctctcttctgacaaaaacaacaggcacctgatc
ccaacgtggcaggatattgacgtcctggagtcaatgcatgcggccttaactcctctcctg
gagttcacagactccctttctggggagtcatatgtgacggtctcatacgtgaagcctgtg
ctccaccttttccgctctagtttgctgaaagttaatgatggggacactcagctcacaaaa
gagctgaagacaaaaataatgacctatcttgacgagaaatatgctgaccctgacacagat
gatctccttgacatggctacctttgtggaccctaggtttaaaggccgatacatcagacca
gggaaggtaggggccattcaaatgagagctgtgtctgagatcatggatgaagaccagggc
caatcacaggcagggccttctgagggagcagcagaccaaggtgcagaaggaggagctgtc
agtggaccacctatgccactgggcgtgaagaagcaacgcaagtcattggggagctttttc
aaaaaacagtgccaagatgatgatgctttgcctctcactgaaaaacaaaaagtggagagt
gagctggaaaggtacctgatgtgccccgatgcagacagtgagtctaaccctctggactgg
tggaggctacatgaacacaacttccccagattgtctcagctggcgaaaaagtacttgtgt
atcccagccaccagcaccccctcagaaagaatttttagtactgggggtaatattgttaca
tgcaccagggcagctttagacccagagaaggtcaaccagctggtgttcctagcacaaaac
ctggactga
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