Paramisgurnus dabryanus (large-scale loach): 135753712
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Entry
135753712 CDS
T10799
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04120
Ubiquitin mediated proteolysis
pdab04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135753712 (syvn1)
04120 Ubiquitin mediated proteolysis
135753712 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdab04121
]
135753712 (syvn1)
Enzymes [BR:
pdab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135753712 (syvn1)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135753712 (syvn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-RING-like
zf-ANAPC11
FAR1_N
zf-RING_Vps41
zf-HC5HC2H
FANCL_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
135753712
NCBI-ProteinID:
XP_065127754
LinkDB
All DBs
Position
16:complement(16287683..16293143)
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AA seq
624 aa
AA seq
DB search
MVRAALVTATSLALTGAVIAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDYMERSPNISWVFHFRVLSLMVLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTIDLQSENPWDNKAVYMLYTELFTGFIKVILYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASQPNQTPAPAPAQAPAAAAPANAA
VPPPVNVVPGLMPQFPPGLFPFWGPFPGAPPPAAPGAQANIDAPQAGADGAQTQRAESEA
SSSTQPTTDSAPASPAAMPGFPFSMPPPFPSAPWLPMPPPPPFSMLSSMPPPPSTLSTMS
EAELRELEQEGRRGLEARLQCLHNIHTLLDAAMLNIHHYLSTVATLSPPRSDANTGEASA
SANEESSPSTGNSENPNQEDENQSTGSVNGATGFTQPDSTTGASKESKEEEEEEECEDEG
GEPSAAELRRRRLRKLETTQTPDH
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagccgctctcgtaacagccaccagtttggctctgactggtgccgttatcgcc
catgcctacttcctcaagcaccagttctaccctactgtggtataccttaccaaaagcagt
cccagtatggcagtcttatacatccaggctttcgtgttggtattcctgttgggaaaattc
atgcggaaggtcttttttggccaattgagagctgctgaaatggagcacttgatcgagcgc
tcctggtatgccgtgacagagacctgtttagccttcacggttttcagggatgatttttct
cctcgatttgtggccctgttcactttgctgctgttcctcaagtgcttccactggctggct
gaagacagggtggactatatggaaaggagtccgaatatctcctgggtcttccacttcaga
gttctctctctaatggtgttgctgggagtgttagacttcctatttgtcaatcatgcgtgc
catagcattattaccagaggagcatcagtgcagctggtgtttggatttgagtatgcgata
ctgatgactatggttctcaccaccttcatcaaatacaccttgcatacaatcgatctccaa
agtgaaaacccgtgggacaataaggctgtctacatgctgtacacggagctctttacaggt
ttcatcaaggtaattttgtatatggcattcatgaccataatgataaaagtgcacaccttt
cctctgtttgccattcgacccatgtatctcgcgatgaggcaattcaagaaggctgtaaca
gacgccatcatgtctcgacgggccatccgtaacatgaatactctctatccagatgccacc
cctgaggatttgcaggccactgacaatgtgtgcatcatctgccgtgaagagatggtgacc
ggagccaaaaaacttccttgcaaccacatctttcactcaagttgccttcgctcatggttc
cagagacagcagacgtgtccaacctgtcgtatggatgttctgcgagcatcccagccaaac
cagactcctgccccagctcctgcacaagcccctgccgctgctgctccagccaatgcagct
gtacctccacctgtcaatgttgtaccaggtttgatgccacagtttcctccggggttgttt
cctttttggggtcctttccccggtgcgcctccacctgctgccccaggtgctcaagcaaac
atagacgcaccacaggctggtgcagatggagcccagacacaaagagcagaatcagaagcc
agcagttctacccagccaaccacagacagtgcccccgcctcaccggcagcgatgcccgga
ttcccgttttcaatgccaccacctttcccatctgctccatggctgccgatgccgccacct
ccaccctttagtatgttgtcatccatgccacctccaccatcaactctgtccaccatgtca
gaagctgagctcagagaattggagcaggagggccggcgaggtttggaagccaggttgcag
tgccttcacaacattcataccttgttggatgccgccatgctcaacattcaccactacctc
agcacagtggctacattgagtcctcctagatcagacgccaacactggtgaagcaagtgcg
tcagccaatgaggagtcctctccatccacgggcaactcggaaaatcccaatcaggaagat
gagaaccaaagcactggatctgtaaatggagctactggatttactcaaccagactcgacc
acaggagccagcaaagaaagtaaggaggaagaagaagaagaagagtgtgaagatgaaggc
ggtgagccaagcgctgctgagttgagacggcgccgactccgcaagctagagaccacgcag
acccctgaccactga
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