Paramisgurnus dabryanus (large-scale loach): 135756495
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Entry
135756495 CDS
T10799
Symbol
sox3
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135756495 (sox3)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135756495 (sox3)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
135756495
NCBI-ProteinID:
XP_065127970
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Position
16:complement(20162005..20163807)
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AA seq
297 aa
AA seq
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MYNMMETEIKSPLPQSNTAAGGKNSSANDQDRVKRPMNAFMVWSRGQRRKMAQENPKMHN
SEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYSLP
GGLLAPGANAVNSGVSVGQRMDYTHMNGWTNSAYSLMQDQLAYQQHPSMNSPQIQQMHRY
DMAGLQYPMMSSAQTYMNAASTYSMSPAYTQQTSSAMGLGSMASVCKTEPSSPPPAITSH
SQRACLGDLRDMISMYLPPGGDSAEHSALQTSRLHSVHPHYQSAGTGVNGTLPLTHI
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaaccgagatcaaaagtccccttccgcagtccaacacggcggcg
ggcggcaaaaacagcagtgccaatgaccaggaccgggtgaagcggcctatgaatgctttc
atggtgtggtctcgtggacagcggaggaagatggcacaagagaatccaaaaatgcacaac
tccgaaatcagcaagcgtctcggtgccgactggaaacttttgactgatgcggagaagaga
cctttcattgacgaggccaagcggttacgagccatgcacatgaaggagcacccggattac
aaataccgtccccgcaggaagaccaagaccctgttgaagaaagacaaatattctttgcct
ggaggacttttggcgccaggtgccaacgctgtcaacagcggcgtctccgtgggccagcgg
atggactacacgcacatgaacggatggacgaacagtgcgtactccctcatgcaggaccag
ctggcctaccaacaacatcccagcatgaacagccctcagattcagcagatgcaccggtac
gacatggcgggacttcagtaccctatgatgtcctctgcccaaacttacatgaacgcagct
tccacatacagcatgtcaccagcatacacacagcaaacctccagcgcaatgggtttgggc
tccatggcatcggtgtgcaagacggaacccagctccccacctccggccataacctctcac
tctcagcgtgcttgtttgggagacctgagggatatgataagcatgtacctgcctcccgga
ggagacagcgccgagcactccgctctacagaccagtcggttacacagcgttcatccgcac
tatcagagcgcagggactggggtgaacggaacactacccctaacccacatttga
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