Paramisgurnus dabryanus (large-scale loach): 135757148
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Entry
135757148 CDS
T10799
Symbol
cul4b
Name
(RefSeq) cullin-4B
KO
K10609
cullin 4
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03420
Nucleotide excision repair
pdab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135757148 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
135757148 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdab04121
]
135757148 (cul4b)
03400 DNA repair and recombination proteins [BR:
pdab03400
]
135757148 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdab04147
]
135757148 (cul4b)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
135757148 (cul4b)
DNA repair and recombination proteins [BR:
pdab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
135757148 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
135757148 (cul4b)
Exosome [BR:
pdab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135757148 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
DUF3292
Motif
Other DBs
NCBI-GeneID:
135757148
NCBI-ProteinID:
XP_065128024
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All DBs
Position
16:20620390..20631712
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AA seq
859 aa
AA seq
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MFPTGLPSPNPPPPAQEPRPAASDVHNDSSLTSSKKRKINSSEKEDIDSISSSPKAICNS
STTTSCSSTTSQQHSKKLRFEDPLDLIGLDVKMAEDSSNPSASCSKAKNVFLAGGVGHHA
NGLTKSAGSATFSNSKPGAAKKLVIKNFKEKPKLPENYTNETWQKLKEAVEAIQNSTSIK
YNLEELYQAVENLCSHKISAKLYKQLRVVCEDHIKAQIDQFREDALDSVLFLKKIDKCWQ
DHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIDGILLLI
ERERNGEAVDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPEYL
HHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTAILQKGLNTLLDENRIQDLS
LLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDVCF
MKNEKFVNGMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIF
RFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMEL
SKDIMIQFKQHIQCQNIPGNIELTVNILTMGYWPTYIPMEVHLPPEMVKLQEIFKTFYLG
KHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEDIKLATGIE
DSELRRTLQSLACGKARVLTKLPKSKDVEDGDKFSCNDDFRHKLFRIKINQIQMKETVEE
QASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLI
DRDYMERDKENPNQYNYVA
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttaccttcccctaatcccccaccgccagcccaagagcccagaccg
gcagcttctgatgttcacaacgatagcagcttaacgtcttcaaagaagagaaaaatcaac
agctccgagaaagaagacattgattcaatatcttcgtctccgaaagccatttgcaattca
tccaccaccacgtcctgctcttccactacttcacagcaacacagcaagaagttgagattt
gaggacccgctggatttgatcgggctggatgtgaagatggccgaggactcgagtaatcct
tctgcatcttgttcaaaggcaaaaaacgtgttcctggccggaggtgtagggcatcatgct
aacggactcaccaagtctgcaggctccgctaccttctccaacagtaaacccggtgctgcg
aagaaacttgttatcaagaacttcaaagaaaagccaaaattaccagagaattacacaaat
gagacctggcagaaactaaaggaagcagtggaggccatacagaacagcacttcaataaaa
tacaatcttgaggagctttatcaggctgttgaaaacctgtgctcgcacaagatctctgcc
aagctctataaacagctcagagtggtctgtgaagatcatatcaaggcacagattgatcag
ttcagagaggatgccctagacagtgttctttttctgaagaaaatagacaaatgttggcaa
gatcactgcagacaaatgatcatgataaggagtatatttttgtttttggatcgtacatat
gttttacaaaattcaatgctgccgtcaatctgggatatgggtttggagttgtttcgtttc
tatatcatcagtgacttaaaggtgcaaagtaagacaatcgatgggattctgcttcttatc
gaaagagagcggaacggagaggctgtggaccgtagtctcttgaggagtttgttaagcatg
ctttcagatctgcagatttatcaagattcgtttgagcaacgttttctggaagagacaaat
cgactgtatgctgcagagggccagaggcttatgcaggagagagaggtgcctgagtatctt
catcatgttaataaacgtttagaagaggaggctgacagagtcattacatacttggaccag
agcacacaaaaacccctcattgccacagtagaaaagcaactacttggagaacacctcaca
gcaatacttcagaaaggtttgaataccctgctggatgagaaccgtattcaggatctgtct
ctgctgtatcagctcttcagtcgtgtgcggggtggcgtgcaggttctgctgcagcattgg
atcgagtacatcaaggcatttggaagcacaattgtcattaacccagagaaggacaagaca
atggtccaggagcttctggatttcaaagacaaagtcgatcacatcattgatgtttgcttc
atgaagaatgagaaatttgtaaacggcatgaaagaggcgtttgagacctttatcaacaaa
cggccaaacaaacctgcagagctcattgcaaaatatgtggattcaaagctccgtgcaggg
aacaaggaagcaacggatgaggaacttgagaaaatgttggataagataatgattatattc
aggttcatttatggcaaagatgtttttgaggccttctacaagaaagatttagcgaagagg
ttactagtgggaaaaagtgcctctgtagatgcagagaaatcaatgttgtcaaaactgaag
catgaatgcggagctgcatttacaagtaaactagaaggaatgttcaaagacatggagctt
tcaaaggacattatgatccagttcaaacagcacatccaatgccaaaatattcctgggaac
attgagctgacagtgaacattctcacaatgggttattggccaacttacatccccatggaa
gtgcatctccctccagagatggtaaaattgcaggaaatcttcaagacattttacctgggc
aaacacagtggacggaaactacagtggcagtcaacattaggacattgcgtgcttaaggca
gaatttaaagagggaaaaaaagagctccaagtgtcactgtttcagacattagtactgctt
atgtttaatgaaggggaggagttttctctggaggacattaaactggctacaggcattgag
gacagtgagctgagacggacccttcagtcattagcctgtggaaaggcacgtgttcttacc
aaactcccaaagagcaaagatgtggaagatggagacaagttctcatgcaatgatgatttc
agacacaaactcttcaggattaaaatcaaccagatccaaatgaaagaaacggtggaggaa
caggccagcactacagaaagagtattccaagaccgtcagtaccaaatcgatgctgccatc
gttcgaatcatgaagatgaggaagactcttagccataatcttctggtgtctgaggtgtac
aaccaactcaaattcccagtcaagcctgctgatctaaagaagaggatagagtcgcttatt
gacagggactacatggaaagggataaggagaaccccaatcagtacaattatgttgcttag
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