Paramisgurnus dabryanus (large-scale loach): 135757588
Help
Entry
135757588 CDS
T10799
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a-like isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
135757588
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pdab04040
]
135757588
Ion channels [BR:
pdab04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
135757588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
135757588
NCBI-ProteinID:
XP_065128251
LinkDB
All DBs
Position
1:38938729..39016205
Genome browser
AA seq
1400 aa
AA seq
DB search
MLPVKEDQDRDADAKRLSTIMTYFINEHLKSGPSSVRKMDVIIPYTSDVPCDTNGQRMWW
AFLASSMVTFFGGLFIILLWRTFKYLWTVCCHCRGKKKNVQRVSNPAVISDGGIKGGGDR
ETGAPPSEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSDAIESCH
EFDKNITLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS
WLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDP
WENFKNSQALSYWECVYLLMVTMSTVGYGDVCAKTTLGRLFMVFFILGGLAMFASYVPEI
IELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVSVEIVFLHNIS
PNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIM
RVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAQG
LSTMLANLFSMRSYIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLK
LLLIAIEYKSDQRESSTLINPGNHVKMQEGTLGFFIASDAKEVKRALFYCKACHDDITDP
KRIKKCGCKRSKKHGHKRMRLACCVACGGAERGCSCMSDSVASNMETLHRGLPFSSVSLY
DNTTTLQCSKSNYNGYIKSIKDEFKSTFQPPNPMPPALNRAQGAVMSPPAGREVRVSVPL
VNNRKGSLLSPAASYLHRLSLSSSRELHQNTATSDITRLHRACSLPVRYRYHSSCTSNIS
RHMCLVEEEQHSALSPKKKQRNGGMRNSPTCSPKIIRHDLLLITGHDHQMETMDENIKKY
DSTGMFHWCPSKEIERVVLTRSEAAMTVLSGHVVVCIFGDVKSALVGLRNLVMPLRASNF
HYHELKPIVFVGSLEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSAN
QNNIDDASLQDKECILASLNIKSMQFDDSIGLLQANSQGFTPPGMDRSSPENSPVHGLVR
QTSITTGANIPIITELAKTDKLLPLVSLSQDKSSGTNIPMITELVNDSNVQFLDQDDDDD
PDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEGLLAEENA
LRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLR
DAHLGNPTQCTKRYVITNPPYDFELVSTDLIFCLMQFDHNAGQTRSNLSTHSSHCPSKKS
PSAHSIPTSIRPGRSRSRDKQNATRTNRSASEKNWYTDESENSFRTTQNKHSNTHSANQV
NQYKTTSNIIQPIREVEEET
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccgttaaagaggatcaagaccgtgatgctgatgcgaagcggctctccacaata
atgacctacttcattaacgagcatttaaaatcgggcccgtcatcggttcggaagatggac
gtgatcatcccgtacacgtctgatgtgccctgtgacacgaacggtcagcgcatgtggtgg
gctttcctcgcttcatccatggtcacttttttcgggggtctcttcatcattctgctgtgg
aggactttcaagtacctgtggactgtgtgctgccactgcaggggtaaaaagaagaatgtg
cagcgggtgagtaatccagctgtcatcagtgatggtgggattaaaggaggaggggatcgt
gagacgggggcgccgcccagtgaggtgggctggatgacctcagtgaaggattgggccggg
gtcatgatctctgctcagacgctcactggacgtgtgctggtggtgcttgtgtttgctctg
agcatcggtgctctcgtcatttactttattgactcttctgacgctattgaatcctgtcat
gagttcgacaagaacatcacgttacagatcgacatggccttcaacgtctttttcttgttg
tactttggactgcgtttcattgcagccaatgataagctgtggttttggttggaggtgaat
tcagtggtggatttcttcaccgttcctcctgtgtttgtgtcagtgtatctgaacagaagt
tggctgggattgaggtttttacgagccctgaggctgatccagttctcagaaatattacag
tttttaaatatattaaaaacaagtaactccataaagttggtgaatttgtgctcgatcttt
ataagcacatggctaactgcagcaggattcatacatctggtggaaaactcaggagatcct
tgggaaaacttcaagaattcccaggcactttcttactgggagtgtgtgtacttactcatg
gtaaccatgtcaacagtgggttacggcgatgtctgtgctaaaacgacactcggacgactt
ttcatggtcttcttcattcttggaggattggccatgtttgccagctacgttcctgaaatc
atagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggtaaatggcaga
aagcatatagtggtgtgtggtcacattacactggagagcgtctctaacttccttaaagac
ttcttacacaaggacagggatgatgttagtgtagaaatagtttttcttcataatatctca
cctaatcttgaattggaagccttgtttaagagacacttcacacaagtggagttttaccag
ggatctgtgcttaatcctcatgatctcgctcgggtgaagattgagtcggctgatgcctgt
ctgattttagccaataaatactgcgctgaccctgatgctgaggacgcgtccaatatcatg
agggtgatatctattaaaaactaccatccgaaaatccgaatcattacacagatgcttcag
taccacaataaggctcatcttctcaacatcccgagctggaactggaaggagggagacgat
gccatctgtctggctgaactgaagcttggtttcatcgctcagagctgtctggcacagggt
ctctccacaatgctggccaatctcttctccatgagatcctacattaagattgaagaagac
acgtggcagaagtattatttagagggagtagccaatgaaatgtacacagagtatctgtcc
agtgccttcgtgggtttgtcttttcccacggtttgtgaactctgttatgtgaaacttaaa
ctcctgttgatcgccattgaatataaatcagaccagagagagagcagcacgctgatcaac
cctggtaatcatgtgaagatgcaggagggcacgctgggcttcttcatcgccagtgatgcc
aaagaggtgaagagggctcttttctactgtaaagcctgtcatgatgacatcacagaccca
aagagaatcaagaaatgtggatgtaaacgctccaagaagcacggccacaagagaatgcgt
ctggcatgttgtgtagcttgcggcggggcagaacgcggctgctcgtgcatgtcggacagt
gtggctagtaacatggagactctgcaccgcggcctccccttctcctctgtctctctttat
gataacaccaccactttacagtgctctaaaagtaactataacggatacatcaaatcaata
aaagatgaattcaaatcaacattccagcccccgaatcctatgccccccgctctgaaccga
gctcagggcgcagtgatgtcgccccctgctggccgggaggtcagagtctcagtgccttta
gttaataatcgtaaagggagtctgttgtcacccgctgcctcgtatcttcaccgactcagt
ctgtccagctctagagaacttcatcagaacactgcgacctctgacatcacacgtctacat
cgggcctgcagtctgcctgtcagatacagatatcattccagctgtacatccaacatcagc
cggcacatgtgcttagtggaggaagaacaacactcggctctgtcacctaagaagaaacag
cgtaacggaggcatgagaaactcacccacctgctcacccaaaatcatcaggcacgacctg
ttgctcatcacaggacatgatcatcagatggaaacaatggatgagaatataaagaaatat
gattccactggaatgtttcactggtgcccatcaaaagaaatcgagagggtcgtactgacc
agaagtgaagcagcaatgactgttctcagcggtcacgtggttgtttgtatatttggagat
gtgaagtcggctctggtcggtcttcgtaacctggtcatgccgctgagagcgagtaacttt
cactatcatgagctgaagcccatcgtgtttgtgggatctctggagtatctgaagagagaa
tgggagacgttacacaactttcccaaagtctccatcttacctggaactccactgagccgt
gctgatctgagagcagtcaacatcaacctgtgtgacatgtgcgtcattctgtcagccaat
cagaacaatatcgacgacgcttctctgcaggataaagaatgcattctggcatctctcaac
atcaagtccatgcagtttgatgacagcatcggtctgctgcaggcaaactctcaaggtttt
actcctcctgggatggatcgctcatctccggagaacagtccagtacatggactggtgcga
cagacgtcaataaccacaggagcaaacattcccatcatcacagaactcgctaaaacagac
aagttgctgcccctggtttctctaagccaggacaagagcagtggaaccaacatcccaatg
ataacagagctggtgaacgactcaaatgttcagtttctggatcaggacgatgatgacgat
cctgacacagaactgtatctcacacagccctttgcctgtgggacggcgtttgctgtcagt
gttctggactcattaatgagcgctacgtactttaatgataacattctgaccctgatccgg
acgctggttactggaggtgccacgccggagctggaaggtttgttggcggaggagaatgcc
ctgcggggaggttacagcacaccacaaacactggccaatagagaccgctgccgggtcgcc
cagctggcactttatgatggacccttcgcagatctcggggatggtggatgttatggagac
ttgttctgtaaagctttaaaaacatacaacatgttgtgttttgggatatatcgcttaaga
gacgcacatttgggcaaccccacccagtgtaccaaacgatatgtgatcacaaatcctccg
tacgactttgagttggtgtctacagatctgatcttctgtctgatgcagtttgaccataac
gccggtcagacccgcagcaatctgtccactcactccagccactgcccgagcaaaaagagt
ccgtctgctcactccatccccacctccatccggccgggtcgcagccgcagtcgagacaaa
cagaatgcgaccaggacgaatcgaagcgcttcagagaaaaactggtacacagatgaatct
gagaacagcttcaggaccacacaaaacaaacacagcaatacacattcagccaatcaggtg
aatcagtacaaaacaaccagcaacatcatccaaccaatcagagaagtggaagaagagacc
tga
DBGET
integrated database retrieval system
