Paramisgurnus dabryanus (large-scale loach): 135757767
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Entry
135757767 CDS
T10799
Symbol
mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X2
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab00450
Selenocompound metabolism
pdab00970
Aminoacyl-tRNA biosynthesis
pdab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
135757767 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
135757767 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pdab01007
]
135757767 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdab03016
]
135757767 (mars1)
Enzymes [BR:
pdab01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
135757767 (mars1)
Amino acid related enzymes [BR:
pdab01007
]
Aminoacyl-tRNA synthetase
Class I (U)
135757767 (mars1)
Transfer RNA biogenesis [BR:
pdab03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
135757767 (mars1)
Prokaryotic type
Other AARSs
135757767 (mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C_3
GST_C_2
GST_C
GST_C_7
DUF6907
GST_N_2
GST_N_3
DUF7140
Motif
Other DBs
NCBI-GeneID:
135757767
NCBI-ProteinID:
XP_065128535
LinkDB
All DBs
Position
7:29614909..29631680
Genome browser
AA seq
922 aa
AA seq
DB search
MKLFIGEGNPHCVKVLAVLELTGVKCDVQLVNHEERVVPYLTRPVLPVLLLPDGQHLFSP
NTICQYLYDVSGQKASEVCNQWLEWEATDLQPAVLQALHMMSLQGKQREAAAVIKETLGY
LEQRLSKASTPFLTSDKISVADIVLWAALYPILSDSGFEAGDLRFVRGWFDGIGVLPACQ
AAAQKILHGKNPEVLKTFLQKLPTTQTQRRDVPTNSSPAEAEDTEHVMSVQEIEEAAQVW
STGLKDCPEVPQRKHPILPQKGKRNVLVTSALPYVNNVPHLGNIIGCVLSADVFARYGRL
RGWNLLYVCGTDEYGTATENKAREEGLTPKEICDKYHDIHASVYKWFQIDFDFFGRTTTQ
RQTEIAQDIFWRLHERSFLLDDTVEQLRCENCQRFLADRFVEGVCPYCRYPEARGDQCDK
CGRLINAVELRNPQCKTCKETPVIKSSKHLFLNLPKLEGELEKWLDQSTGSGDWTLNARQ
ITRSWLRDGLKPRCITRDLQWGTPVPHPDYSEKVFYVWFDAPIGYLSITANYTDQWEKWW
KNPQQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNNLIATEYLNYEDTKFSKSRGV
GVFGDMAKDTEIPSDVWRFYLLFIRPEAQDSAFSWADMALKNNSELLNNLGNFINRAGMF
VSKFFEGLVPEMFLNDDDKRLIAQVCWELKQYIQLLNKVRIRDALKCILNISRHGNQYIQ
VNEPWKKIKGGDSDRQRAGTVTGVSVNVACLLSVLLEPYMPTVSQTIRTQLQAPPTCTAA
MMTETGRFICTLPAGHRIGTVSPLFQKLENEQIEALRKRFGGQQSEEENDKGETPNTAAA
DTKPNAGVELNSPVNVKADPERAKQLNALLTEQADKVRALKAQKAEKSVIAEEVGKLLEL
KKQLALAEGKSPEPSNQKAKKK
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgtttattggcgaggggaatccgcactgtgttaaagttctggctgtgctggaa
cttactggagtgaaatgtgacgtgcaactggtcaaccacgaggagagagtggtaccatac
ctcactcgcccggtgttacctgtcctgctgttacccgacggtcagcacctctttagcccc
aacaccatctgtcaatacctttatgatgtaagtggtcagaaagcatctgaggtctgtaac
caatggctggaatgggaagcaacagatttacagcctgcagttttacaggccctccacatg
atgtcactgcagggaaaacaacgtgaagcagcagctgtgataaaggagacactgggttat
cttgaacagagactgagtaaagcatctacaccattcttaacctctgataaaatatcagtt
gcagatattgtcctgtgggcggcgctctaccccatcttatccgactcaggttttgaagct
ggtgacctgcggtttgtgcgaggttggtttgatggcattggcgttctgccggcgtgtcaa
gcggcagctcagaaaattctgcatggaaagaatcctgaagtcctgaagactttcctacag
aaactaccaaccacacaaacacagcgaagagacgtcccgaccaacagcagtcctgcagag
gctgaggacacagaacatgtgatgtcagtgcaggagattgaggaagcagctcaggtttgg
tccacaggacttaaagattgtccagaagtaccgcagaggaaacacccaattctcccacag
aaaggaaagaggaacgtgttggtcacaagtgccctgccctacgtcaacaatgtgcctcat
ctgggcaacatcattggctgtgtgctcagtgctgatgtattcgccagatatgggcgttta
cgaggctggaatcttttgtatgtctgtggtacagatgagtatggaacagcgactgaaaac
aaggctcgtgaggagggtctgacaccgaaagagatttgtgataaataccatgacatccac
gcctccgtctataagtggttccagatcgactttgacttcttcggtcgcaccaccacccaa
cggcagactgaaatcgctcaggatattttctggcgtctacacgagagaagttttctcctg
gatgatacggtggagcagctgcgatgtgagaactgtcagcgcttcttggccgaccgcttc
gttgaaggcgtttgtccgtactgtcgctatcctgaagctcgtggagatcagtgtgataaa
tgtggccgtctgatcaatgctgtggagctcaggaatccacagtgtaagacgtgtaaggaa
actcctgtgatcaagtcctctaaacatctgtttctcaacctgccaaagttggaaggcgag
ttggagaagtggttggatcagtcaacaggttctggtgattggacattaaacgcacggcag
ataactcgctcgtggctgcgggacggcctgaagccgcgctgtatcaccagagatcttcag
tgggggacgcctgtacctcatccagattacagtgagaaagtgttctacgtgtggtttgat
gctcctattggctacctctccatcacagcaaactacaccgaccaatgggagaagtggtgg
aagaatcctcagcaggtggagctgtataacttcatggcaaaggacaacgttccctttcac
agtgtggttttcccgtgttcacttctgggtgcacaagacaactacacacttgtcaataat
ctcatcgctacagaatacctgaattatgaggacactaagttttctaagagtcgtggtgtt
ggcgtattcggtgacatggctaaagacacagagatcccgtcagatgtttggaggttttat
ctgctgttcatccgtcctgaagctcaggactctgcgttctcgtgggctgacatggccctc
aaaaacaactctgaacttctcaacaaccttggaaacttcattaacagggcaggaatgttt
gtgagtaaattctttgaaggcctcgttcctgagatgttcctcaacgatgatgataaacgt
ctcattgctcaggtctgctgggagctcaagcaatacatccaactgctgaataaagtccgg
attcgtgacgctctgaagtgcatcctgaacatctcgcgtcatggcaatcagtacattcag
gtgaatgaaccctggaagaagatcaaaggaggagacagtgacaggcagcgagccggtacg
gtgacgggtgtatcggttaatgtggcgtgtcttctgtctgtcctgctggagccctacatg
cccacagtgagtcagaccatccgaacccaactgcaggctccgcccacctgtaccgccgct
atgatgactgaaacgggacgctttatatgtacactaccagccggccatcgcatcggcacg
gtcagtcctttgtttcaaaagttggagaacgaacagattgaggcattgagaaaacgattt
ggaggacaacagtcagaagaggagaatgataaaggagagactcccaacacagctgcagcc
gacaccaaacccaacgccggtgttgagctgaactctccagtgaatgttaaagcagatcca
gagagagccaaacaactgaatgctttactgacagaacaagctgataaagtacgagcgctg
aaggctcaaaaagctgagaagtctgttatcgctgaggaagtcggcaaattgctggagctt
aaaaaacaactcgctcttgcagaaggcaaaagtccagagccgtccaatcagaaagcgaag
aaaaagtga
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