Paramisgurnus dabryanus (large-scale loach): 135757935
Help
Entry
135757935 CDS
T10799
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04810
Regulation of actin cytoskeleton
pdab05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
135757935 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135757935 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135757935 (cyfip1)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
135757935 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
135757935 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Motif
Other DBs
NCBI-GeneID:
135757935
NCBI-ProteinID:
XP_065128783
LinkDB
All DBs
Position
7:25090708..25146945
Genome browser
AA seq
1253 aa
AA seq
DB search
MASTVTLEDALSNVDLLEELPLPDQQPCIEPLPSSLIYQPNFNTNFEDRNAFVTGIARYI
EQATVHSNMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIDRFCGEVRRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMAEPSSIQESQNLSMFLANHNKITQSLQQQLEVINGYDELLAD
IVNLCVEYYENKMYLTPSEKHMLLKVMGFGLYLMDGNNSNIYKLDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELSRYIKTSAHYEENKSRWSCTSTGSSPQYNICEQMIQIRDDHMRFI
SELARYSNSEVVTGSGRQESQKTDSEYRKLFDLALQGLQLLSQWSAQVMEVYSWKLVHPT
DKYSNKECPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTI
YAALQDFAQVTLREPLRQAIKKKKNVVQSVLQAIRKTICDWETGREPHNDPALRGEKDPK
GGFDIKVPRRAVGPSSTQLYMVRTMLESLVADKSGAKKTLRSSLEGPTILDIEKFHRESF
FYTHVLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSVPWILTDHILEIKEASM
MEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVLAGS
LLLDKRLRAECKNQGANIPWPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSSALYKSM
ELAISRFESEDLTSIMELEGLLEISRMTHKLLGKFLTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTILPFSQEFQRDKPPNAQPQYLYGSKQLNLAYSS
IYGLYRHFLGPPHIKVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNALLFCMLSEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLEAKYTALHMVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRIRGYLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLNWAGCMIITLLGQHRRFDILDFSYHLLKVQKHDGKDEIIKSVP
LKKMVDRIRKYQILNDEIFAILNKYMKSGDGENMPVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcatctacagtgactttagaagatgctctgtccaacgtggacctgctggaggagctg
ccgctcccagatcagcagccctgcattgaacctcttccgtcctcccttatttaccagccc
aacttcaacaccaactttgaggaccgcaatgccttcgtgacaggcatagcacgatacatc
gagcaggccaccgtccactccaacatgaatgagatgttggaagaaggtcaggagtatgcc
gtgatgctttacacatggaggagctgctcaagagccattcctcaggtgaagtgtaatgaa
cagcccaacagagtggaaatctatgagaagacagtggaggtgctggagcctgaagtcacc
aaactgatgaacttcatgtattttcagcgaacagcaatagatcgcttctgtggggaagtg
cgacgcctttgtcacgcagagcgtaggaaggactttgtgtctgaagcctatcttcttaca
ctggggaagttcatcaacatgtttgcagtgcttgatgaacttaagaacatgaagtgcagt
gtgaaaaatgaccattcggcctacaagagagctgctcagttcctgaggaaaatggctgag
ccgtcctccattcaggaatctcagaacttatccatgttcttggctaaccacaacaagatc
actcagtccctacagcaacagcttgaggtgatcaatggatatgatgagctgttggcagat
attgtcaacctctgcgtagagtactatgaaaacaagatgtacctcactcccagtgagaaa
cacatgttgctcaaagtaatgggctttggtctctatctgatggatggaaacaacagcaac
atctacaaattggatgccaagaaaagaatcaaccttacaaagattgacaagtttttcaag
caactgcaggtggtgcctctgtttggtgacatgcagattgaactgtcccgctacatcaaa
accagtgctcactatgaggaaaacaagtccaggtggtcatgcacatcgacaggcagtagt
ccgcagtataatatctgtgagcagatgatacaaatccgtgatgaccacatgcgcttcatt
tctgagctcgcccggtacagcaacagtgaggtggtgacaggttcagggcggcaagagtcc
cagaagacagactccgagtacaggaagttgtttgatctggctctgcaaggcctacagcta
ctctctcagtggagcgcacaagtcatggaagtgtattcatggaaattggtgcaccccaca
gacaaatactccaacaaagaatgcccagacaatgctgaggagtatgaacgtgctaccaga
tacaactacaccagcgaggagaaatttgccctggtggaggttattgccatgataaaaggc
ctgcaggttctgatgggccgaatggagagcgtctttaaccacgctatccgtcacaccatc
tacgcagccctgcaggactttgctcaagtgacgctaagagagccactgcgccaggccatc
aaaaagaagaagaatgtcgtccagagtgtcctccaagccatccgtaagaccatttgtgat
tgggagacgggcagagagccacacaacgacccggcgctgcgaggcgagaaagaccctaaa
ggcggattcgatatcaaagttccccggcgggccgtaggaccctccagcactcaactgtat
atggtcaggacgatgctggagtctctggttgctgataagagcggtgctaagaaaactctg
cgcagcagtctggaggggcccaccatcctggacatcgagaagtttcatcgcgagtccttc
ttctacactcacgtgctcaacttcagcgagacactgcagcagtgctgtgatttgtcccag
ctctggttccgtgagttctttctagagctcacaatgggccgccgcatccaattcccaatt
gagatgtccgtgccctggatcctcaccgaccacatcctggagattaaagaggcatctatg
atggaatatgtgttgtattcacttgacctgtacaatgacagtgcacactacgccctcacc
aagtttaaaaagcagttcctttatgatgagattgaggctgaggtgaatctctgctttgac
cagtttgtctacaaactcgcagatcagattttcgcctactacaaagtgcttgccggaagt
ctccttctggataagagactaagggctgaatgtaagaatcagggcgctaacatcccctgg
cccccatccaaccgctacgagacgctactcaaacagagacacgtccagctactgggtcgt
tcgattgacctgaaccgactgataacccagcgagtgtcctccgcgctttacaaatccatg
gagcttgccatcagccgctttgagagcgaggacctcacctccatcatggagttggagggt
ttgctggagataagccgaatgacccataaactcctgggtaaatttttgacactggacagt
tttgatgccatgttccgagaggcaaaccacaacgtctctgcgccctatggcagaatcact
ttgcatgtcttctgggagctcaactatgacttcttgcccaactactgctataacggctcc
acgaacaggtttgttcgcacgatactgccgttttcacaagagttccagagagacaagccg
cccaacgcccagccacagtacctgtatggttcaaagcaattgaatttggcatacagtagc
atatacggcctctaccgacacttcctgggaccaccacatatcaaggtgatctgcagactg
ctgggatatcagggcatcgctgtggtgatggaggagctgttaaaggtcgtcaagagtctg
ctccaaggcaccatccttcagtatgtgaagaccttgatggaagtgatgcccaagatatgc
cgcctgcctcgccacgagtacggctcgccaggtatactggagttcttccaccatcagttg
aaggatatcgtggagtatgccgagcttaagaccgtatgcttccagaacctaagggaggtt
ggaaacgctctgctcttctgcatgctgagtgaacagagcttgtctcaagaggaggtgtgc
gacctgttgcatgcagcacccttccaaaacatcctgccaagagttcacgttaaagaaggt
gaacgtctggatgcaaagatgaagcgattggaggccaaatacacagctctgcatatggtg
cctctaatcgagcgtctgggaaccccgcagcaaattgccatcgctcgtgagggtgacctg
ttgaccaaagagagactgtgctgtggtctctccatgtttgaagtcatcctgactcgcatc
cgtggttacctggacgacccaatctggcgcggcccgttgcccagcaacggcgtgatgcac
gtggacgaatgcgtggagtttcataggttatggagcgccatgcagtttgtctactgcatc
cctgtgggagcacacgagttcactgtcgagcaatgttttggagatggactcaattgggcc
ggttgcatgattatcacattacttggtcagcatagacgcttcgatatcctggacttcagt
taccatctcctaaaagtgcagaaacacgacggcaaagatgagatcatcaagagcgtgcct
ctcaagaaaatggttgaccggattcgcaagtatcagattctgaacgatgagatctttgcc
attttaaacaagtacatgaagtctggggacggtgagaacatgccagtagaacatgtacga
tgcttccagcctcccattcatcagtcattggccagcaactga
DBGET
integrated database retrieval system
