KEGG   Paramisgurnus dabryanus (large-scale loach): 135760936
Entry
135760936         CDS       T10799                                 
Symbol
kdm4c
Name
(RefSeq) lysine-specific demethylase 4C
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
pdab  Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:pdab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pdab03036]
    135760936 (kdm4c)
Enzymes [BR:pdab01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     135760936 (kdm4c)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     135760936 (kdm4c)
Chromosome and associated proteins [BR:pdab03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    135760936 (kdm4c)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD Tudor_3 Rad9_Rad53_bind Tudor_5 PHDvar_NSD LBR_tudor DUF4537
Other DBs
NCBI-GeneID: 135760936
NCBI-ProteinID: XP_065131031
LinkDB
Position
4:complement(42020125..42040298)
AA seq 1537 aa
MAGAGANASANPACKIMTFRPTMEEFKDFNQYLVYMESQGAHRAGLAKVIPPKGWKPRQN
YDDIDDFVIQAPIQQMVAGQSGLFTQYNIQKKPLTVQEFRRLANSDMYCTPRYLNYEDLE
RKYWKNLTFVSPIYGADVSGTFYDEGIDEWNIGHLNSVLDVIEEDCGVSIQGVNTPYLYF
GMWKTSFSWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPNSYKSCEAFL
RHKMTIISPSVLKKYSIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFASIRWID
YGKVATQCTCSKDMVKISMDPFVRRFQPDRYQAWTQGKDPCSLDHTLATPSTTPELQSWL
QRRRRKTPIAKSVHYPRACSKQSKTVDTTSVRRGARRSRGATLSSNDKEEEILVEHKKEQ
QHSSEMKGLAGSCRQMCVVKVTRVQSDLLAQSSRQLRGSSPERPLTPPLTATSCQRDPDV
GHTNAQESLMLDEDQVSTSSNSNVQPGPESLESAMTVGVTPNLQRTAESSNQMVNSNCES
ASEKSTPSTPVIYLPSLDFRGTAALFLESGSQQAKIETDDTTADILTESSIDCGASALYT
EQSSIRLASDSSERKKNSGIQHAALFSEMPLLMPELTEDERLNSQSLAPEMPSLTLAVQT
DSTKLLCNDPNTSAAPALHLENPNLPPVLTDDMATQRACTHWSFTTTQKGASQSSNSDTC
ISELASFTSTQWEPPEKKSRQEGHKYTLPFANQKTQHKDTHTSTVPLSAEQLQIPTNSLK
QCPAVSDMASEIFDSSCPLDVSSDNKQTTVCVEEQPSSLTASASPFVDSKPFTSTIWKNL
SSQNPAVLIESLEPELAVGISKGASSLTDYAHDSLPYTMWSESGCQPGKFHDSPNFSPCT
QAWGNLERSSMQCPGSEMTPNLPPDLQLQKMEVEAAETCVLGEETGSQQLQPEEIKNQEY
YEGAKSENDGSASESDSCESGDKCAESSSESSDENAMSDPECGEAGLEPGEVCTYQIQNV
KKTTKSWRHPLRKPTARAVPSAVKQQAASDDDTIEECESKEEEPETEEWAKPFVHLWQHR
KVHFQYEREHNMAAAKTAPHCAVCTLFMPYCQGENTDERKHEVLMSADTESQETPEPLEA
GSRSRPLIPEICFAYEEGPCPLNTLLEEDGSSPLVACNNCCVQVHASCYGVAAHDIGTVW
TCDRCESGDLAAGCCLCNLRGGALKRTSDNRWAHVMCAVGLPEVKFIDVVKRAPIDVSAI
PVQRYKLKCIYCRNRIKKLSGACIQCSCGRCPTSFHVTCAHAAGVPMEPDDWPYVVFITC
HRHQSRSSSAILYGDHHGKAPNAHTSIIKVIQMTPKVKVSRSELTVGQTVISKHKNLRYY
SSRVTQATAQTFYEVMFDDGSFSNDTFPEDIVSRDCAQLGPPEVGEAVQVKWPDGLYYGA
KYLGSNTTYMYQVEFEDGSQVLAKREDIYTLDEDLPKKVKARLSTASSMRFQDAFFTTQA
ERKRRRTPNSRFQTDYIAHISPRTFARALETHSSKYN
NT seq 4614 nt   +upstreamnt  +downstreamnt
atggcaggtgcaggggcaaacgcctctgctaaccctgcctgtaaaatcatgactttcaga
cccaccatggaggagtttaaagacttcaaccagtacttggtgtatatggagtctcaggga
gctcatcgtgccggcctagctaaggttattccacccaagggttggaagccacgccaaaat
tacgatgatattgatgattttgtcatccaagcccctatacagcagatggtggctggccaa
tcaggactctttactcagtacaacatccagaagaagcctctcactgtgcaggagtttcgg
agactggccaacagtgacatgtactgcacacctcgatacctgaactatgaagacctggag
aggaagtactggaagaatctgacgtttgtctctcccatctatggtgctgatgtgagcggc
actttctacgatgagggcattgatgagtggaatattgggcacttgaactcagtcttggat
gtgatagaggaagactgcggtgtgtcgattcagggagtaaacacaccgtatctgtacttt
ggcatgtggaagaccagcttttcctggcacacagaggacatggacctctacagcatcaac
tacctgcacttcggagagcccaaatcctggtatgccatccctccagagcatggaaagaga
ttagagcgtctcgctataggtttctttccgaacagctataaaagctgtgaggcattcctg
cggcacaagatgaccataatatccccttctgtactaaagaaatacagcatcccatttgat
aagattacacaggaggcgggcgagtttatgatcacatttccctatggttaccatgctgga
ttcaaccatggcttcaactgtgctgaatccaccaactttgccagcatccggtggattgat
tatggcaaagttgcaactcagtgtacgtgcagtaaggacatggtgaagatctcaatggac
ccgtttgtcagacgattccagccagaccgctaccaggcttggacacaaggtaaagaccca
tgctcattggatcacaccctagccacgcctagcaccacacctgagctgcagagctggctt
cagagacgtcggaggaaaacacccatcgccaaaagtgtccactacccacgtgcatgctcc
aaacaatcgaaaaccgtggataccacatcagtgagaaggggtgctcgaaggagtagaggc
gcaactttatcatcaaatgacaaggaagaggaaatccttgtggaacacaagaaagagcaa
cagcattcaagcgaaatgaaagggcttgctggctcatgtcgacaaatgtgcgttgttaaa
gtgacaagagtacaaagtgatttgctggcccagtcctccagacaactccgaggttcttcc
ccagagagacccttgacccctccgctcacggctacatcctgccagagagaccctgatgtc
ggtcatacaaatgctcaggagtctttaatgttagatgaagatcaggtgtccacaagctca
aactccaatgtgcagcctggacctgaatctttagagagtgccatgactgtaggtgttact
cctaatttgcaaagaactgctgaaagttcaaatcagatggtaaactcgaactgtgaatcg
gcctctgaaaaaagtacaccttctactccggtgatctatttaccatcactcgacttcaga
ggtactgcagctctatttctggaaagtggatcgcagcaagctaaaattgaaacggacgac
acaaccgccgatatcttgactgagagcagtatcgactgcggtgcatcagcactttacact
gagcaaagctcaatccgtttagcctcagactcctcagaacgcaagaaaaactctggaatc
caacatgctgctttattttcggaaatgcctctattgatgcccgagctaacggaagatgaa
agattgaattctcaatctctcgcaccagaaatgccctcacttactctggctgtccaaacg
gactccacaaaactcctttgtaatgatccgaacactagtgcagcacctgctctccatctg
gaaaacccaaacttacctcctgttttaacagatgacatggcaactcaaagagcatgtacc
cattggtctttcactacaacccaaaaaggtgccagccaatcaagtaactcagacacttgt
atatccgaactagcatctttcacctcaacgcaatgggaaccaccagaaaaaaagtctaga
caggaaggacataaatatacactcccattcgcaaaccagaaaactcaacacaaggacaca
cacacttccactgttccactgtccgctgaacaacttcaaatccctactaacagtcttaag
caatgtcctgcagtatcagacatggcctctgaaatttttgacagctcatgtcctcttgat
gtttcatcggataacaaacaaactactgtgtgtgttgaagaacagcccagctctctcact
gcatccgcgagcccatttgtagattccaaacctttcacttcaaccatttggaaaaacctc
agctcccagaatcctgcggtgctcattgaaagtttggagcctgagctggcggtgggtatt
tccaaaggtgcgagcagtctcacagactacgcccatgactcacttccctacactatgtgg
tctgaatcaggctgccaaccaggcaagttccatgattctccaaacttttcaccttgcaca
caggcctggggcaacttggaacgcagctccatgcagtgccctgggtctgagatgacacca
aaccttcctccagatctgcagctccagaagatggaggtggaagcagctgaaacgtgtgtt
cttggagaggaaacaggctctcagcaacttcagccggaggagataaaaaatcaagagtat
tacgaaggtgccaagtcggaaaacgatgggtccgcaagcgaatcggattcctgtgaatcg
ggagataagtgtgccgagagcagcagtgaatccagtgatgagaacgctatgagtgaccct
gaatgtggggaagcaggtctggagccaggggaagtgtgcacatatcagatacaaaatgtt
aagaagaccaccaagagttggcgtcaccccctgagaaagccaacagccagagctgtacct
agtgctgtaaaacaacaggctgccagtgatgatgataccatagaggagtgtgaatctaaa
gaagaggaaccagagactgaggaatgggcaaaaccttttgttcatttgtggcagcacagg
aaagtccatttccaatatgaaagagagcacaacatggctgcagctaaaaccgctccgcac
tgtgctgtttgcaccctcttcatgccttactgtcagggtgaaaatacggatgaaagaaag
catgaagtattaatgagtgctgatacagagtcacaggagaccccggagccacttgaggca
gggtcgagatcacgacccctcatccctgaaatctgtttcgcatatgaggagggtccttgc
ccattgaatacgcttttggaggaggatggatccagtcctcttgtggcctgcaacaattgc
tgtgttcaagttcatgccagttgttacggtgttgcagctcatgacattggcacagtgtgg
acatgtgaccgatgtgaaagcggagacctggcagctggatgctgtttgtgtaacctaaga
ggaggtgctttaaaaagaacttcagacaacagatgggcccatgtgatgtgcgctgtgggt
ctccctgaggtgaagttcattgacgtggtgaagagagctcctattgacgtcagtgccata
cctgtacagagatataaactgaagtgtatatattgtcgtaacaggataaaaaagctgtct
ggggcgtgtattcagtgctcatgtggacgttgtcccacatctttccatgtcacctgtgct
catgctgctggagtgcccatggagcctgatgattggccgtatgtggtttttatcacctgt
cacagacaccaatcacggagctccagtgctatcttatatggggatcatcatggcaaagct
ccaaacgcacatacatccatcattaaagtaatccaaatgactccgaaagtgaaagtgagc
agaagtgaattgacagtggggcagacagtgatcagcaagcacaagaacctgcgttactat
agctctcgtgttacacaagcaacagcccaaacattttatgaagtcatgttcgacgatggt
tcattcagcaatgatacattccctgaagacattgtgagcagagattgtgcccagcttggg
cctcctgaggtcggggaggctgtccaggtgaaatggcccgatggactttattatggagcc
aagtaccttggctccaacactacatatatgtaccaggtggaatttgaagatggatctcaa
gtattagcaaagagagaggacatttacactttggatgaagacctacccaaaaaagtcaaa
gcacgtctgtcaacagcctcaagcatgcgtttccaggatgccttcttcactacacaagct
gaacgaaaaaggcgacgcacaccaaattcccggttccagacagattacatcgctcatatt
agccctcgaaccttcgctagggccttggaaacacatagcagcaaatacaactga

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