Paramisgurnus dabryanus (large-scale loach): 135762895
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Entry
135762895 CDS
T10799
Symbol
abca1b
Name
(RefSeq) phospholipid-transporting ATPase ABCA1b
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab02010
ABC transporters
pdab04148
Efferocytosis
Brite
Transporters [BR:
pdab02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
135762895 (abca1b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
135762895
NCBI-ProteinID:
XP_065131383
LinkDB
All DBs
Position
16:complement(33303208..33344488)
Genome browser
AA seq
2281 aa
AA seq
DB search
MSVSTQLGLLLWKNFTYRRRQTLQLLTEIVWPLFIFFILISVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGIVCNANNPCFRHPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDK
SLDGFKELISAVKEMQMNTAGFKLKDFLRENETLSTFLRENASFTQHFVENILEAEVNLE
KVLIKGFGVHLRDMCKSVALKDFVTISNETVARFTQDIICKSPSTWLDQAESHFKSNLDF
LKPIRLDVRTNATDVHQVAKATDILLESLGSLAVEFASMRSWSDLRNEILFLTENATGSP
SLMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNFQAIFGSHNDSDDEMVSVYDNTSTPYCN
NMMRNMEINPISRMIWRALKPLLMGKILYTPHTPATQKIIHEVNKTFQELGILRDLGGMW
EETRPRIWSFMENSEEMNLMRTLLRNNATANLFRAQLAGTQWSVDDVISFLSKHSEDVRP
HGTAFTWRDVFNETDQAIMSISRFMECVNLDKLEPVSTEEKLVNESMSLLDNRKFWAGIV
FLDVPLNSSELPPHVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSYLQ
DIIENSIIRAITGTKEKTGVYIQQMPYPCYVDDIFLRIMSRSMPLFMTLAWMYSVAIIIK
GVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLISASLLVVLLKMGNLLPYSDPGV
VFLFLGSFAVVTIMQCFLISTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYVGFSAKV
IASLLSPVAFGFGCEYFALFEEQGVGIQWNNLFSSPLEEDDYNLTTCLILMYFDAFLYGV
MTWYIETVFPGQYGIPRPWYFPFTKSYWFGEGNTNNTTVHGKKSNAGAVCIEEEPTHLEL
GVYIENLVKVYRHGRKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTA
YIMGRDIRSELSSIRQSLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEEVKAEMEQILT
DTGLPHKRKSRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLKY
RAGRTILLSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKKNNEPS
LSSCRNSSSTVSFVKKEDDASDSSSDAGLGSDQESEAATAIGTTWPESPVVPVDVSLISS
LILKHVPASRMVEDLGHEITYVLPYESAKDGAFVKLFHDLDDRLADLGISSYGVSDTTLE
EIFLKVAEDSGVDTEISDGTVPVRRRRQHAFGGDHQSCLKPLTEDDNFDCNDSDADPESK
ETDYLSVTDGKGSYQVKGWSLKRQQFVALIWKRFLYARRSRKGFFAQIVLPAVFVCIALV
FSLIVPPFGKYPSLALNPWMYEEQFTFISEDAPDDASTQKLLSALLDDPGFGTRCMEGEP
IPDAPCTMADEDWFTPEVPESVADIFRKANWTMDYPSPACECSCDGKKKMLPECPAGAGG
LPPPQTKISQMDTLQNLTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARSTQ
VLPPAEEIDDAIHRVRQIFQLGKNSGSAADRFLNSLSTFINGLDTKNNVKIWFNNKGWHS
IGAFLNVMNNGILRANLPAGKDPRQYGITAFNHPLNLTKEQLSQVALMTTSVDVLVSICV
IFAMSFVPASFVVFLIQERVNKAKHMQFISGVQPLLYWLANFVWDMCNYVVPATLVILIF
VCFQQKAYVSTTNLPVLALLLLLYGWSITPLMYPASFLFKIPSTAYVVLTSVNILIGING
SISTFVMELFGSNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFR
SPLEWDMVGKNLFAMAVEGVVFFTITVLIQYRFFCKPRSFNTKLSPIGEEDEDVARERQR
IVNGAGQGDILELRQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTG
DSVVTSGEAFIAGKSILREIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEHEV
CEVAEWGIRKLGLVKYVDKNAGSYSGGNMRKLSTAISLIGAPPVVFLDEPTTGMDPKARR
ALWNCIHSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTI
ILRVAGPDPDLQPVMKFIESELPGSTLKEKHRNMLQYQLSSSLTSLAHIFSILAKNKEFL
RIEDYSVSQTTLDQVFVNFAKDQSDDHCDSSIRRKETAVDMVLLSPLSSADNIEKPKESF
V
NT seq
6846 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtctccactcagctgggtctgctgctttggaaaaacttcacttacagaagaaga
caaacgctccaactgctgaccgagattgtgtggcctctctttattttcttcatcttgatc
agcgtgaggttaaactacccgccatacgaacaacatgaatgtcactttcccaacaaagcc
atgccctcagcgggcacactgccctggatccagggcattgtctgtaatgccaacaatccc
tgcttccgacacccaacccctggggaatctcccggagtcgtcgggaactttaatgattcc
ataatctcacgcctgttttccgatgccaagaaaattttgctgtacagtcaaaatgacaag
agcttagacggattcaaggagcttatcagtgctgtaaaagaaatgcaaatgaacacggcg
ggtttcaagctgaaggactttctacgtgaaaatgagaccctgtccacattcctcagggag
aacgcctcctttacacaacattttgtagagaacattctggaagcagaagtgaatctagaa
aaggtgctgatcaaaggttttggtgtccatctgagagacatgtgtaagtccgttgcgctt
aaggactttgtgaccatttcgaacgaaacggtggctagattcacccaggacatcatctgc
aaatcccccagtacctggttagaccaagctgagagtcacttcaagtccaacctggacttt
cttaaacctattaggctagatgtcaggactaacgccaccgatgtccatcaagtagccaaa
gccacagacatacttctggagagtttgggatcactggctgtagagttcgccagtatgagg
agctggagcgatctgcgaaacgagatcttgtttctgactgaaaacgccactgggtcacca
agcctgatgtaccaggctgtctctcgcatcgtctgcggacacccagaaggcggcggtctt
aagatcaaatccctcaactggtacgaagacagcaacttccaggcaattttcggcagccac
aacgacagtgacgatgaaatggtttctgtttatgacaacacctcaactccatattgtaac
aacatgatgaggaacatggaaatcaaccccatctctcgtatgatctggagagccttgaaa
cctcttctgatggggaaaatcctctacactccacatacacctgcaacacagaagatcatt
catgaggttaataagacatttcaggagcttgggattctaagagatttgggaggaatgtgg
gaggaaaccagaccaaggatttggagctttatggagaacagtgaagaaatgaatctgatg
cggactctacttcgaaacaacgccactgctaatttatttagggcccagttggctggtaca
cagtggagtgtggatgatgttattagctttttatccaagcattccgaagacgtgcgtcca
cacggaacggcatttacctggagggacgtcttcaacgagacagaccaagccattatgagc
atatcccgtttcatggagtgtgtaaacttggataaactggaaccagtgagcacagaggag
aaactggtgaacgagtccatgagtctgctggataacagaaagttttgggccggcattgtg
tttctggacgtaccgctcaacagttcagaacttccaccgcacgtcaattacaagatccgc
atggacatcgacaatgtggaacgcacaaacaagatcaaagatggatattgggaccccggt
cccagggccgacccatttgaggatctccggtacatttggggaggattttcttacctgcag
gatattattgaaaacagcattatccgagcaattactgggaccaaagagaagactggtgtc
tacattcaacagatgccttacccatgctacgtagatgacattttcctccggattatgagt
cggtctatgcctctgttcatgactcttgcctggatgtactcagtagccatcatcatcaaa
ggcgtcgtctatgagaaggaggcccggctcaaggagaccatgaggattatgggattggac
aatgggatcctgtggttcagctggttcattagcagtctcattcctctattgatcagtgca
agcttactggttgttctactcaagatgggtaatctcctgccatacagtgaccctggggtt
gtcttcctctttcttgggtcattcgccgtcgtaaccataatgcagtgcttcctcatcagt
acggcattcgctcgcgctaacctggcagctgcctgcgggggcattatatacttcaccctt
tatctgccttatgtactgtgcgtggcctggcaagactacgtgggcttctctgccaaagtc
attgctagcttgctgtctccagtggcgttcgggttcggctgtgagtatttcgccctgttt
gaggagcagggtgttggtattcaatggaacaatctcttctccagtccattggaagaggat
gactacaatctcaccacgtgcctcatactcatgtactttgatgcattcttgtatggtgtc
atgacctggtacatagaaaccgtttttccgggacagtacggcattcccaggccctggtac
ttcccgttcactaaatcctattggtttggagagggcaacacaaataataccacagtacat
ggaaagaagagcaatgctggagccgtctgcattgaagaggaacctactcacctcgagctg
ggagtttacattgagaatctagtgaaggtgtatcgtcacggcaggaagttggcggttgat
ggtttgacactcggcttttatgagggtcaaataacctccttcctcggtcacaacggtgct
ggaaaaaccaccactatgtctattctcactggccttttccctccgacctccggcactgct
tacatcatgggcagagacatccgctcagagctgagctccatcagacagagcctcggtgtt
tgtccacaacacaacgtcctcttcagcatgttgacggtggaggagcacatctggttttat
gcccgtctgaagggtctgtctgaagaggaggtgaaggctgagatggagcagatcttgacg
gacacaggtcttccacacaaacgcaaatctaggacaagccagttatcaggtggcatgcag
aggaaactctcagtggcccttgcatttgtcggtgggtcgaaggttgtcattctggatgag
ccgaccgccggtgtggacccttatgctcgcaggggtatatgggaccttcttctgaaatat
cgtgcaggtcgtaccatcctcctttccacccatcatatggacgaggcggacattctgggg
gatcgtattgccatcatctcccatggaaagctttgttgtgtgggctcctcgctctttttg
aagacccagttgggaacgggatactatctcacattggtgaagaagaacaatgaaccgtct
ttgagttcctgcagaaactccagcagcacggtgtcttttgttaagaaagaagatgatgca
tcagacagcagctcagatgctggtctaggaagtgaccaagagagcgaagccgccactgcg
attggaactacatggcctgaatctccagtcgttcctgtagatgtgtccctcatctccagt
ctgatccttaagcacgttcctgcttcccgaatggtggaggatctcggtcacgagatcacg
tatgtgttgccgtacgagtctgccaaagatggtgccttcgttaaacttttccacgacctg
gatgaccgtctggccgacttgggcatttcaagctatggggtttcagataccacactggaa
gagattttccttaaagtggcggaagacagtggtgttgatacagaaatctcagatggaact
gtgccggtacgcagacgcagacaacatgcatttggtggggaccatcagagctgcctcaaa
cccctgactgaggatgacaactttgattgcaacgactccgatgctgatccagaatccaaa
gagacggattatttgagcgttactgacggtaaaggatcgtatcaagtgaaaggctggagt
ctgaagaggcaacagtttgtggctcttatatggaagagatttctttatgcccgtcggtca
aggaaaggcttctttgcacagattgttcttcccgctgtctttgtgtgcatcgcactggtt
ttcagtcttatagttccaccatttggaaaatatcccagtctggcccttaatccttggatg
tatgaggagcagttcacattcatcagtgaagatgcgcccgatgatgcaagcacacaaaaa
ttactcagcgccttattagacgatcctggttttggaacacggtgcatggaaggagaacca
attcccgacgctccttgtacaatggccgatgaagattggtttactccagaagttccagag
agcgtagctgatattttcaggaaggcaaactggaccatggactatccgtctccggcttgt
gagtgcagctgtgacggcaagaagaagatgcttccagaatgcccggcaggtgctggtgga
cttccacctcctcagactaagatcagccaaatggacaccctccaaaatctgacagggcga
aacatctcagactatctagtaaaaacttacgcgcagatcattgggaaaagtttaaagaac
aagatctgggtgaacgaattcaggtatggaggattttcactgggtgcgagaagcactcag
gtccttcctcccgctgaagagatcgatgatgcaatccatcgagtcaggcagatcttccag
ttgggaaagaactcaggctcagcggccgatcgtttcttgaacagtctgtctaccttcatc
aatgggctggacacgaaaaataatgtcaagatatggttcaacaacaagggttggcacagt
attggagcttttcttaacgtaatgaacaacggtatcttgcgtgccaacttaccagctggt
aaagacccgcgtcagtatggcatcactgcttttaaccatccactcaatctgaccaaggag
cagctttctcaagtggcactaatgactacctcagtggacgtgttggtgtccatctgcgtg
atcttcgccatgtccttcgttcccgccagctttgtcgtcttcctgattcaggagcgagtg
aataaggccaagcacatgcagtttatcagtggagttcagcctttgctttactggctggcc
aactttgtctgggatatgtgcaattatgtggttcctgccacactggtcatcttgatcttc
gtgtgcttccaacaaaaagcttacgtctcaaccaccaatctgcccgttctggcgcttctg
ctccttttatacggatggtccatcactccactgatgtatccggcttccttcttattcaaa
atccccagcactgcttatgtggttctcaccagcgtcaacatcctcattgggatcaacggc
agcatttccactttcgtaatggagctgtttggaagtaatgagatcggtggcattaatgac
atcctgaagaatgttttcttgatctttccccatttttgcctcggtcgaggtctcattgac
atggtgaagaatcaggccatggctgatgccttggagagatttggtgaaaaccgtttccgt
tctccgttggagtgggacatggtgggcaagaacctttttgcgatggcggtggaaggagtg
gtcttctttaccatcactgtcctcatccaataccgtttcttctgtaaacccaggtctttc
aatactaagctgagcccgataggtgaggaagatgaggatgttgccagagaaaggcagagg
attgtcaacggtgcgggtcaaggagacatactggaactccgacagctcactaaggtgtac
aagaggaaacagaagcctgctgtggatcgtctttgtgtagggattcctccgggagagtgt
tttggtctgctcggtgtcaacggagccggaaagacgagcacatttaaaatgctgactggt
gattctgtggtgaccagtggtgaagctttcatagcagggaagagtatactcagggaaatt
gatgaagttcatcagaatatgggctactgtcctcagtttgatgcaattaatgacctgcta
acaggacgggaacacttggaattttacgccatcctgcgtggtgtaccagagcatgaagtt
tgtgaggtggctgagtggggaatccgaaagttgggccttgtgaagtatgtggacaaaaat
gcaggaagctacagtggtggcaacatgcgcaaactctccactgccatttctctcatagga
gctcctccggtggttttcctggatgagcccaccactggcatggaccccaaagcccggcgg
gcgttatggaactgcattcacagtgtcatcaaagagggacgctctgtcgtgctcacctca
cacagtatggaggaatgtgaagcactgtgcactagaatggccatcatggtgaacggcagg
ttccggtgtctgggcagcgtccaacacctgaagaacagatttggtgatggatacaccatc
attctgagggtagctggtccagatccagaccttcagcctgtgatgaagtttatcgagagc
gagctaccaggcagtacactaaaagagaaacatcgaaacatgctacaataccagctctct
tcttcccttacatctctcgctcacatcttcagcatcctcgccaagaataaagagttcctc
aggattgaagattattctgtgtctcagaccactcttgaccaggtgtttgttaactttgcc
aaggaccaaagtgacgaccactgcgacagctccattcgtcgtaaggagaccgcggtcgac
atggtattactgagtccactgtccagtgcagataatatagagaagccaaaagaaagcttt
gtgtga
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integrated database retrieval system
