Paramisgurnus dabryanus (large-scale loach): 135763268
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Entry
135763268 CDS
T10799
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
Enzymes [BR:
pdab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135763268
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
U-box type E3
135763268
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
135763268
NCBI-ProteinID:
XP_065131408
LinkDB
All DBs
Position
Unknown
AA seq
1781 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHITLSDLKRQIMGREKLKAADCDLQITNAQTKEEYTDE
GALIPKNSSVIIRRIPIGGVKSTSKTYVIDRSEPSSGSSKAIDESSSISLALLSKTANLA
ETNASEEDKIKAMMSQSNHEYDPIHYTKKLTGPPPPNYTCFRCGKTGHYIRNCPTNAQDR
SFEAPQRIKKSTGIPRSFMVEVDDPNRKGVMLTNSGIYAIPTIDAEAYAIGKKEKPPFLP
QNQSSSSEEEDPVPDELLCLICKDLMTDAVVIPCCGNSYCDECIRTCLLESEEHVCPTCK
QSDVSPDALIANKFLRQAVNNFRNETGYTKRIRKAAQAATLGSQTQAPVQRPPMKLASSR
QQDPLMANVQSSTPSSTPPQSMPVALSPSPPRPSSSTPPPPVSSSTVQSSSAPAVSDYSP
TVDSPPHSTKQEDPPLAKESEVPTSSAVPSSESPVATTTAVSKGYHVPVIGQPNMPQHVM
HNRSGGQPRPSGQRPTGSRPTWEPHDRSTNRGRGPNDRPPRTQPPPPPMQNLPPVQCTGA
PMYMPPALFPPPPHPMPQPPGVIPPQYPMHYPPGQQPPPPYNLPPPVFPPVPPNVQAPWG
PPGTQPPIPNPIPTMPAEPFLSKEEFYRQQRRLKEDSQCRFVTREKKSKLDEFTNDFAKE
LLEYRKIQKERRRSFSRSKSPYRDSTYSGSSYSYSKSRSRSRSPRSYSRSLSRSRSRSRS
RSRSRSFSRSPYSRRGRGRSRSFRSRSRSPAYHRSRSRSPSYRARDVSGAAGGIYRSRSR
TPPFKNQSPGKKVPPTAPMESERKYNSRYRELPPYDAKAYYGRNVDHSDPYERERYREWE
REYREWYDKYLKSYDNPPPGGQLRGRGSRDPYTPERYPPPRPRENSPYGRGERREDYPPP
PQSRGGPPRGRGPMTYQEKCTEKYTHIHVNTTGPSRGLKESSKPIKDREASGSTGTESKS
LKHKKHRKKKRDDGDLFSHSDSMDETRKDDRKGDSMLMNSNRDDATPVRDEPMDSTAVPY
KSTPEKDKKEKTKSKTDKVKRKSESSGQKKEITGKVVKPVKEKEAEAPREKVAPPEPAIK
RVKDEPSHKPEASKSQTIESKLMLPRKLMHSRPIKHHQDPKPVKEDPKNKKELAKDSAKQ
DKVPIKDVKVKKEPEKTVKPEEKIPTKAVDSKPDRKKRKDEKTSLKDLDAPPVKVAKMEV
VNVAKSSPKSKPKPESERPIEKEKPAIPSLLDIKPEPVRKIKINREIGKRISSIDRPVSG
DDSAHAPSKGRLEKPRGKLRRKVHVSDGSGSVLVDYTSTSSTGGSPIRKHEEKLDLKKTV
VKTLEEYTNDSSTPAEDEIVMIKVPRSKWEKEDYESEEDDSKGNIKTSSVNTSSSPPVDE
NTAAKPTDKESPDAAKPPSARKEAPVDVKPAKESTSSDKERDTDKEKDREKERDRANESD
VRASEREVTDKRKPNQERERARERGSEHGGERSSSHSSRDRPADRPEPTSRKPAGRETAT
GVANRKPDHREDSRDHMGTRSKDDREPIRRRVSPSPPSRVKDSHVDSGKKDNDVSQESRS
PIRDKKTSSQSLSEPKRTGTEDHKTDSSLTKESQSSRHSDVRPTKDKEHRTPHRALTPEP
KTDGEKAPSHSDHIKVPSARTTRLASDLARETDEAAFVPDYSESESEPSDMEGKTDQRGQ
ERDSSASPSPSGSPGHNSSPSSPGSQDSKKKKKDKKEKKKHKKHKKHKKHKKHTSNESES
ELKGQKHKHKKKKSKKSKDKDKDEKDKEESEREEQRTKVSV
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtgtccattacaagttttcttctaaacttaactacgacacggtcacctttgat
ggccttcacatcacgctcagtgatctgaaacgccaaatcatggggcgagaaaaactgaag
gccgcggactgcgacctgcaaatcaccaacgcgcaaacaaaagaagaatacactgatgaa
ggagcactcatacccaaaaactcatctgttatcatcagacgtatccctattggaggggtc
aagtcgacaagtaaaacatatgtcatcgatcgatctgaaccatcaagtggatcttcaaaa
gcaattgatgagtcttcttccatttcactggccctgctttcaaagacagccaatcttgct
gaaacaaatgcgtcagaggaagacaaaattaaagcaatgatgtctcagtccaaccatgaa
tatgaccccatccattatacaaaaaagcttaccggtccacccccaccaaactacacgtgc
tttcgctgtggaaaaaccggacattacatcagaaactgcccaacgaatgcgcaggatcga
agtttcgaagctcctcaacggattaagaaaagcacaggaattcctcgcagtttcatggtg
gaggtagatgatcctaacagaaagggagtcatgctgaccaacagtggaatatatgccatt
cccaccattgatgctgaggcgtatgctattgggaagaaagagaaaccgccttttttgccc
cagaatcagtcttcgtcctccgaggaagaagatccagtgcctgatgagctgttgtgtctg
atctgcaaagatcttatgactgatgctgttgttattccctgctgtggaaatagctactgt
gatgagtgtattcggacatgtttgctggagtctgaagaacatgtttgccccacgtgcaaa
caatcggatgtttctcctgatgctctgattgccaacaagtttttgcgtcaagcagtaaat
aattttaggaatgaaactggatacaccaaaaggattcgcaaagctgcacaggcggctaca
ttaggatcccagactcaggctcctgtgcagcgaccgccaatgaaactggcctcctcacgc
caacaggaccctcttatggccaatgttcagagctcaacaccttccagcacccctcctcag
agcatgccagttgccttgtctccttctccccctcgcccgtcctccagtacaccaccacca
cctgtcagcagctctactgtacagagtagcagtgcacctgcagtctcagactacagccct
acggtggactctcctccgcactctaccaagcaggaggacccgccattggccaaggaatct
gaggtccccacatcttctgctgtgccttcatctgaaagccctgtggcgacaactactgcc
gtttcgaaaggataccatgtacctgttattgggcagcccaatatgccacagcacgtcatg
cacaacagatcaggaggacagccaaggcctagtggacaaaggccaactgggagccgtcct
acatgggaacctcatgacaggtccacaaatagaggcagaggtcctaatgatcgaccacca
agaacacagccacctcctcctccaatgcaaaatcttcctcctgtgcagtgtacaggagct
ccaatgtacatgcctcctgctctctttccacctcctccacaccctatgcctcagccacct
ggtgtgattcctccgcagtatcctatgcattatcctccaggacagcaacctcctcctccc
tacaacctaccaccaccggttttcccaccagtcccacctaatgtccaggctccttggggg
cctccagggactcaaccgcctattcccaacccaatccccactatgccagcagaacctttc
ctgtccaaggaagaattctacagacagcagcgcagactaaaggaagattcccaatgtcga
ttcgttaccagggagaagaaatctaagcttgatgaatttaccaatgactttgccaaagag
ctgttggagtatagaaagatccaaaaggagagaaggcgatccttttctagatcaaaatct
ccttacagggactccacatacagcggctcatcgtattcctattcaaaatctcgctctagg
tccagatcaccacgctcatattctcgatcattatcccgctcacgttctagatcccgctcg
cgttcccggtcacgctccttctcacgttcaccgtactcccgcagaggccgaggtcggagt
cgcagctttcggtctagatcacggagtccggcgtaccatcgttctaggagccgatcacca
tcatatagggctcgagatgtgagtggagcggccggtggaatttatcgttcccgctccagg
acgccaccgtttaagaaccaaagtcccggcaagaaagttccacctactgctccgatggag
agcgagcgcaagtacaacagcagatacagagagcttcctccttatgatgctaaagcttac
tatggacgaaatgtagatcatagtgatccctacgagagagagcgctaccgagagtgggaa
agagagtacagggagtggtacgacaaatacctcaaaagctacgacaacccacccccaggt
ggtcagcttcgaggccgtggcagtagagatccttatactcctgaacgttatcctcctcct
cgaccaagagaaaactccccttacggcaggggggaacgtcgagaggattacccacctcca
cctcagagccgcggtggccctccgagaggccgcggtcccatgacgtaccaagaaaagtgc
actgagaagtacacccacatccatgtcaacactactggacctagcagaggacttaaagaa
tcttctaaacctattaaggatcgagaggccagtggcagcactggcacagagtccaagtcc
ctgaaacacaagaaacatcgcaagaaaaagagagatgacggtgacctctttagccactct
gactctatggatgaaaccaggaaagatgatcgcaaaggagactccatgcttatgaattca
aaccgtgatgatgccacacctgtcagggatgagcccatggatagcacagctgtaccctac
aagagcacccctgaaaaagacaagaaagagaagactaaaagcaagactgacaaagttaaa
cgcaagtctgagagcagtggacagaaaaaggaaataacaggaaaggtggttaagccggtt
aaagaaaaagaggcggaagcaccacgagagaaggtggctccccctgaaccggcaattaag
agagtaaaagacgaaccatcccacaaacctgaagcaagcaaatctcagaccatcgagtct
aaactcatgctccctcgtaagctcatgcattccaggcccatcaaacaccatcaagacccg
aagccggtcaaagaggatcctaagaacaaaaaagaactggcgaaggattctgcaaagcaa
gacaaggttcccatcaaagatgttaaggtgaagaaagagccagagaagacggtgaaacct
gaggaaaaaatccccaccaaggcagttgatagtaaaccagatagaaaaaaacggaaagat
gaaaagacatctctgaaagacctcgacgctcctccagtaaaagtagctaaaatggaagtt
gtcaacgtagccaaaagctcgccaaaatctaaaccaaagccggagagcgaaaggccgatc
gagaaggagaaacctgccattccgtccctgttggatattaagccagaacccgttagaaag
attaaaattaacagagaaattggcaaaagaatatctagcatagatcgccctgtttcagga
gacgactctgctcatgccccgtcaaagggcaggttagaaaagccaagaggaaaattgaga
aggaaggtacatgtttctgatggctcaggatctgtacttgtcgattacaccagcaccagc
tccacaggtggaagccctatcagaaagcatgaggagaagcttgacctaaagaagactgtg
gtgaagacactggaggagtacaccaatgacagctccacccctgcagaggatgaaattgtc
atgataaaagtgccccgctccaaatgggaaaaagaagactatgaatcggaggaagatgat
tcaaagggcaacattaaaacttccagcgtcaacacatccagctctccacccgtggatgag
aacactgctgccaaaccaacagacaaggagtctcccgatgctgccaaacctccgtctgcc
cgcaaagaagctccagtagatgtcaaacctgccaaggagtccacgtcaagtgataaggag
agagatactgacaaagagaaggaccgagagaaagagcgagacagggcgaatgaaagcgat
gtcagagcttctgaacgtgaagtgactgataaaaggaaacctaaccaggaaagagaacgg
gcacgggagagaggcagcgagcacggaggtgagcggagctcatctcattcctccagagac
agaccggctgacaggccagaaccaacgtcgagaaaaccagccggtagggagaccgcaaca
ggtgtcgccaacagaaaacccgaccacagagaagattcaagagaccacatgggaaccaga
tcaaaagatgatagagaacctatcagaaggagagtttcaccctccccaccctcaagggtt
aaggactcgcatgtagattctggaaagaaagataatgatgtttctcaagagtcacgaagt
ccaatcagggataagaaaacgtcatcgcaaagtctctcagagcccaaaagaaccgggacg
gaggaccacaaaacagactcttctttaactaaggagagccagagctctaggcattctgat
gtgcgtcccacaaaagacaaagagcacaggactcctcacagggctttgactccagagcct
aagaccgatggagagaaagctccatcacacagcgaccacatcaaagtgccatctgctcgc
accactcggctcgcctcggatttagcgcgggaaaccgacgaggccgcatttgttccagac
tacagcgaaagtgagagcgaaccctcagacatggagggtaaaacagatcaaagggggcaa
gagagggacagcagtgccagcccaagcccctctggtagccctggacataacagcagcccc
agctctccaggcagtcaggatagcaaaaagaagaaaaaggacaaaaaggagaagaaaaaa
cacaagaagcacaaaaaacacaaaaagcataagaaacacacgagtaatgaatctgagtct
gagctcaaaggacagaaacacaaacataagaaaaagaagtcgaaaaagagtaaagacaaa
gataaagatgagaaggataaggaagagagcgagagagaggagcagaggacaaaagtatcg
gtttaa
DBGET
integrated database retrieval system
