Paramisgurnus dabryanus (large-scale loach): 135763274
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Entry
135763274 CDS
T10799
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135763274
04121 Ubiquitin system [BR:
pdab04121
]
135763274
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
135763274
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
135763274
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZBED1_RNase-like_helical
ZBED1_RNase-like
Dimer_Tnp_hAT
zf-BED
DUF4371
hAT-like_RNase-H
FAM200-ZBED5_RNase-like
DUF8247
Hi1a-like
LUC7
Motif
Other DBs
NCBI-GeneID:
135763274
NCBI-ProteinID:
XP_065131405
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All DBs
Position
16:19213650..19219665
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AA seq
640 aa
AA seq
DB search
MATGGAADAAAAQNPLVEKKGGKSHVWRYFGFAADDKGNIIDPQKPVCKRCHRSFLSRGG
NTSNLIKHLKDRHPDLMREFKQLQTEDDHQTPQQTLKQTTVTDAFQQQQKYDKNSPEARK
LNRAVAEFLCTDQVPIYTVEKRGFQQMLHHLNPKYQLPSRNFFMYTEIPRLYNETRDIII
QHLGEKPFYSCTTDLWTSRTADTFMSVTLQYITKLWELQSWCLGCCGLNTDHTAESLKEA
FEEKLEDWNLDIIRMSGITTDNATNNKKAFEDYTWIPCFGHNLHLAVNKALEISRVSASL
SRLRKTISAFTRSPKLSRQLVKKQKDLSSPDHKLIHDEPTRWNSSYDMVQRFLEQQQVVC
AVLAEDRKKWYLMPKDTDITVLETVKAVLEPLSPFTDALSGEKHTTLSSVLPLLWKIYDC
LSYEQSDSALTQEMKEKINEYLRHRYDNLQLQLLLNTATYLDPRFKNSFVSLKDDVKQSL
LDEVKKMGNDGNVSQVSGESSQVRPSKKSKTDLKQLLSTIQGEKKEKGEPASSSQTQLTA
SDELNGEFLVYSQMPEVSAEDDPLSWWKTNMGTLPQLSEFARKYLCIAASSCSSERRQEW
ECEGQLAEVRAGKRRACCSNALQRSAALEHHNNITFIPES
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccggcggtgctgctgatgcagcggcggctcagaatccacttgttgagaagaaa
ggaggaaagagccacgtatggagatattttgggtttgcagctgatgacaagggtaacatt
atagatccccaaaaaccagtttgcaaaagatgtcaccgaagttttctctcaagaggagga
aacacttcaaacttaataaagcaccttaaagacagacatccggatctaatgagagagttt
aagcagctgcagactgaggatgatcatcaaactcctcagcaaactctaaaacagacaaca
gttacagatgcttttcagcagcagcagaaatatgacaaaaactcacctgaagcaagaaaa
cttaaccgagctgttgcagaatttttatgtacagatcaagtgcccatttacacggttgaa
aaacgtggattccagcaaatgcttcatcacctaaacccaaaataccagcttccaagccga
aacttttttatgtacacagagattccccgcctgtacaatgaaacgagggatatcataatc
cagcatctcggagagaaaccgttttacagctgcacaacagatctttggacaagtagaact
gcagacacttttatgtctgtaactctgcagtacattaccaaattgtgggaattgcaatcc
tggtgccttggctgttgtggtctcaacacagatcacactgctgaaagtttgaaggaggcc
tttgaagagaaacttgaagactggaatttggacatcataagaatgtcaggcattacaact
gataatgccacaaataacaaaaaagccttcgaagactacacctggattccttgctttgga
cacaatctccatcttgctgtaaataaggcattagagattagcagggtgtctgcatcgctg
tcaaggctccgaaaaacaatctctgcctttacaagatccccaaaactttcacgtcagctt
gtcaaaaaacagaaagatctctcctctccagaccataaactcattcatgatgaacccact
cgctggaattcttcatacgatatggtgcaacgtttcttggagcaacagcaggttgtctgt
gctgtgctggctgaagacaggaaaaaatggtatctgatgccaaaagacacggacattaca
gttttagaaactgttaaagcagttctcgagcctctcagtccttttacagatgcacttagt
ggggaaaaacataccaccctgtcctcagtcttgccattgctttggaagatatatgattgt
ctcagttatgaacaaagtgactctgcattaacccaggagatgaaggagaagataaacgag
tatcttcggcatcgctatgataacctgcagctacagcttcttttaaacactgcaacttac
cttgatccaagatttaagaacagctttgtttctcttaaggatgatgtgaagcaaagtctc
ctggatgaggtgaagaaaatgggcaatgatggaaatgtatctcaagtttctggagagtca
agtcaagtgaggccttctaaaaaatccaaaactgacctgaagcaacttctctccaccata
caaggggaaaagaaagaaaaaggagaaccagcatcctcaagtcaaacacagcttactgca
agtgacgagttaaatggtgagttcttggtgtacagtcagatgcctgaggtcagtgctgag
gatgatccactttcatggtggaaaacaaatatgggtacactacctcaactatcagagttt
gccaggaagtatctgtgcattgctgcatcaagctgttcatctgaaagacgacaggagtgg
gagtgtgagggtcagctggcagaggtcagggcaggaaagagaagagcctgctgttccaac
gcactgcagcgctcagcagcactggagcaccacaacaacataaccttcataccagagagc
tga
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