Paramisgurnus dabryanus (large-scale loach): 135764643
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Entry
135764643 CDS
T10799
Symbol
smarce1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
pdab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135764643 (smarce1)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135764643 (smarce1)
PBAF complex
135764643 (smarce1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
GCN5L1
Pcf11_helical
Motif
Other DBs
NCBI-GeneID:
135764643
NCBI-ProteinID:
XP_065131482
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All DBs
Position
3:30723442..30730542
Genome browser
AA seq
423 aa
AA seq
DB search
MSKRPSYAPPPAPAPTTQMPTTPGFVGYNPYSHLAYNNYRLGGNPGGNNRVMNSSGITVP
KPPKPPDKPLMPYMRYSRKVSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYL
NEYEAEKIEYNDSMKAYHNSPAYLAYVNAKNRAEAAQEEESRQRQSRLDKGEPYMSIQPA
EDPDDYDDGFSMKHTAAARFQRNHRLISDILSEVVVPDVRSVVTTARMQVLKRQVQSLMV
HQRKLEAELLQIEDRHQDKKRRFLESTDSFNNELKRLCGLKVEVDMEKLAAEMAAAEEAA
RRRAEEREREAAEQVERAAQEEQQPASAQSNANPEQTSSSEAKDGEDKPTPMETDENPAE
ASEGPQEEQGASAAAGEKPAQPEPAEGATDEGTSDSTAPSESSSGPPAEAQASDNTPEER
QSQ
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacggccatcctatgcccctccccctgccccagcccccacaacacaaatgccc
accacccctgggtttgtggggtacaacccatacagccatctggcctacaacaactacagg
ctgggagggaaccccggcgggaacaacagggtaatgaactcctcagggatcactgttcct
aagccgcccaaaccgcccgacaagccgctgatgccctacatgcggtatagccggaaggta
agcaggaaggtttgggaccaagttaaagcctctaatcctgacctgaagttatgggagata
ggaaagatcattggtggcatgtggagggacctcactgatgaggaaaagcaggactattta
aacgagtacgaagcggagaagatcgagtataatgactctatgaaggcctaccacaactct
ccagcctacctggcatacgtcaacgccaagaaccgcgcagaagccgcccaggaggaggag
agcaggcagaggcagtcacgactagacaaaggcgagccctatatgagcatccaacctgct
gaggaccctgatgactatgacgacgggttctccatgaagcataccgcagcagctcgtttc
cagaggaaccaccggcttatcagcgacatcctcagtgaagttgtagtgcctgatgttcgc
tcagtggtgaccaccgctcgcatgcaggtcctcaagcgccaagtccagtccctcatggtt
caccagaggaagcttgaagcagagctccttcaaatcgaggaccggcatcaggacaagaaa
agaaggtttctggagagcacagattccttcaacaatgaactgaaacggctgtgcggtctg
aaggtggaggtggacatggagaagctggcagctgaaatggctgccgcagaggaggcagct
cgccggagggcggaggaaagagagcgggaagcagcggagcaggtggagagagccgctcaa
gaagagcaacagcctgccagcgcgcagtctaatgccaacccagaacaaacctcgtccagc
gaggccaaggatggggaggacaaacccacccctatggagacagatgagaatcctgctgaa
gcatctgaaggaccgcaggaggagcaaggtgcctcagctgcagctggagagaaacctgcc
caacctgagcctgcagagggcgctacagatgagggcaccagcgacagcaccgctccatct
gaaagcagctctggacccccagcagaagcccaggcctctgacaacacacctgaagagagg
cagtcacaataa
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