Paramisgurnus dabryanus (large-scale loach): 135765107
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Entry
135765107 CDS
T10799
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdab03036
]
135765107 (chd9)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
135765107 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Motif
Other DBs
NCBI-GeneID:
135765107
NCBI-ProteinID:
XP_065131855
LinkDB
All DBs
Position
2:32799686..32877329
Genome browser
AA seq
2951 aa
AA seq
DB search
MTDPIMEFFDDPSIFGGGLDSLVNDDTGFNPGTVSLEDELHLGPSFERLQEEAGSSSSIQ
HGLPYNHPVGHFDTMKSQTSIAQTFTGPEGGNSNARAFLPQQQQFQVHNMNQVPQTNGLF
LNNSPMWGNHDQKGGNYHQHHQQQLQQQHKQFQQQPFQSQHQQYSQQHLQQRQHGLGQHP
MSNQQQIPHQQISHQGLHHLGKTYQEHSGFYYQANVSQIHSQQAHHNSLIREGGSFHPAV
APSSHSQSKTYLESSMMPVSSQQHGGFQVGQGVQGFTASPRLEDNDLGFPVQSSPATHSF
SSGSVSHATSYPSTHYSLPSQPSPVVNATQSYSSMANSSTVIPSSATNLLDNGCSFLSSG
MEHEQQQVQIHGSPAPQCLYRGMQSSKSGQNLFISSEVFPEALSSFSDDHSFPLVERKNC
NVAGPSITSQSGINSNGFRALEEALLGEQHDARLEDLGEASDLLGDELLPQLEALDQEES
SNHSWVNAGLENVGQDDDGDKVKEIEDVIDVPIGHSARPPKNTNGPSSQVRVLSPPVKSS
SSSSSSSSSYASVSEKRVKKRQQQQMESPLSDDKQLKANRIISEAIAKARERGEKNIPRV
MSPESFPSSSSQHHSHKAGGSKSKAKNKSSKSARIVASSKPKQKSQIGKIVIKFGKKKRK
KADSSDELSDDDRPPRRSSKDNDSKRRSNRKVKRKKYEEDGEARLSEEEMKVIVKAKKSS
NAHKEPKVQLFVENPSEEDAAVVDKIMASRLVKKEVSPGVIVECEEYYVKYKNYSYLHCE
WATEQHLEKDKRIQQKIKRFKIKQAQKAHFFADIEEEPFNPDYVEVDRVLEVSYCQDKDS
GEPVVYYLVKWCSLPYEDSTWELNEDVDQSKIEEFKQLQAVKPHTDRKERPPASHWKKRE
QSRQYCNGNCLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLEEIYRTGIKG
PFLIIAPLSTITNWEREFRTWTNLNVIVYHGSVVSRQMLQQYEMYFRDSQGRVIRGAYRF
QAVITTFEMILGGCPELNAIDWRCVIIDEAHRLKNKNCKLLEGFKLMSLEHKVLLTGTPL
QNTVEELFSLLHFLEPTRFPAENTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKK
LAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANVPNLLNTMMELRKCCNHPYL
IKGAEEKIMEDFREVYSPAAVDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVR
CLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA
ADTCIIFDSDWNPQNDLQAQARCHRIGQDKAVKVYRLITRNSYEREMFDRASLKLGLDKA
VLQSMSGRENSVGGGGQVQQQLSKKEIEDLLRRGAYGAIMDEEDEGAKFCEEDIDQILQR
RTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKEAEIDVDTVNGRNSLVI
DTPRVRKQTRPFSATKDELAELSEGESSGEDKPKLRRPHDRLNSYGRTECFRVEKNLLVY
GWGRWKDILAHGRFKRQLTERDVESICRALLAYCLVHYRGDDKIKGFMWDLIAPTEDGRT
KELQNHLGLSTPVPRGRKGKKMKTQSSSFDIQKAEWIRKHNPEHMLSDDGYKKHLKHHCN
KVLLRVRMLYYLKQEVIGAQCQKVLDGADASEVDIWVPEPDHSEMPALWWDTLADKCLLL
GVYKHGYEKYNTIRADPALCFLERVGRPDEKAIAAEQRGNDFMDGDVDDPEYKPAPALLK
DDMEDDASSPGELVITDTVGEGGSVLDGGGGNLSASTGIYWPSPSTLTARLRRLITASQR
FTKSRQILQIHQTQTQTTTPAIYTLPPMLNDALNPKMVAKIERQQRWTRREEADFYRVVS
TFGVVYDPDLGCFDWTKFRAMARLHKKTDESLQKYLCAFIAMCRRVCHLPPREGDMVDTS
LAIQPITEERASRTLYRVELLRKIREQVLRHPQLYERLSLCQSGPDLPVWWEAGSHDRDL
LLGAAKHGVSRTDYHILRDPELCFIAAQRNYSQKKGSLPPVQAQNQALSLGQSHVPSPLQ
HVLAKDATASPLSYPREDSSELKDEPLSEGEEEIGKREIKMETSSVRPPTPSGVEVKDED
LKEVESERRMVAARTKPLTPNSVVRKQKKLSKRSRREARRASGSDSDSDGSSSSSSSSSS
SRSSSSSSSSSRSGSSSSSSSSSCSSGSSSSSSSSSSSSDNSDSEEVPKNVSAVSGVKGF
DEDSVASVSATQDDMQDSHVTNGISNPPHPFQGGYMLAASYWPKDRVMINRLDSICQAVL
KGKWPGVRRAYEGNAVTSFYTTKLLDNAGTLVEDPSASPQGSKVKKHDADREKEFSVKIN
NEGSLKLTFQKQGLPLKRPLEGEEGPLAQQQYLARLQELQNASDTSLVDYTKTQNNYPQG
MSGHMRLNGMMDGQPAIKKKRGRRKNVEGMDLLFMNKNRPPMMAEQVPAGWSAVVAGTSA
TAGSSTPQGPGSLDIESRVPVISLKDGTRLAGEDAPKRKDLDQWLKEHPGFVADVGAFIP
STNKLQFQDGRPKQKRHRCRNPNKIDINSLTGEERVQIINRRNARKIGGAFAPPLKDLCR
FLQENPEYGVPPEWADVVKQSGYLPESMFDRILTGPIVPEEVSRRGRRPKNALAKPATAA
GASANAALALNPVLTNGLLGGLDLPSLQALQHNLQSLQSLQLMGLSQDPANMAAMFPMML
SGMPGLPNLLGMSGLLGGKTSEEAAGVALPGDEDGRKKSSVDSTAPKGSAQTSSPDRKAE
RTEGQSSKATTSTATISNQTSASASGHQLAFNPLLLSSMLYPGMLLSPGLNLPVANQPQA
ANTQPTPQPAASEATPLQPGCSEEKDSDEGEEPDDKKDNSGPEGSAKADSSSSESDSSSE
SSEDSDSSDED
NT seq
8856 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccccatcatggagttttttgatgaccctagtatatttgggggaggccttgac
agcctagtcaatgatgatacaggatttaaccctgggactgtgtctttggaagatgagctt
caccttggccctagctttgagcgtcttcaagaggaagcagggtcaagttcaagcatccaa
catgggttaccctacaatcatcctgtggggcattttgacactatgaaatcacagacttca
atagcacaaacctttactggtccagaaggaggtaacagtaatgcaagagcatttctgcca
cagcaacaacaatttcaagtgcataacatgaaccaggtaccgcagacgaatggactgttt
cttaacaatagccccatgtggggaaaccatgatcagaaagggggtaactatcatcagcac
catcaacaacaacttcaacaacagcataaacaatttcaacagcaaccatttcagagtcag
catcaacagtacagtcagcagcatcttcaacaaagacagcatggtcttggccaacaccca
atgtcaaaccagcagcaaattccccatcaacaaatatctcatcagggtttgcaccatctt
ggtaagacgtatcaggaacattctggattttattatcaggccaacgtctctcaaattcat
tcccaacaggcccaccataattcgctcatcagagagggtggttcatttcaccctgcagtc
gctccgagtagtcattcgcagtccaaaacatatctagagtcctcaatgatgcctgtgtca
tctcagcaacatggtgggtttcaggtgggccaaggcgtccaaggttttactgcaagtcca
aggttagaggataatgatttgggcttccctgtgcaatcttcccctgcaacccattctttc
tcttccgggtcagtaagccatgccacatcctatcccagcacccattactctcttcccagc
cagccttctcctgtagtaaatgcaactcagtcatactcatctatggcaaactcttcaaca
gtgataccatcatcagctacaaacctgttggataatggttgctctttcctttcttctgga
atggaacatgagcaacagcaagtccaaatacatggcagtccagcaccacaatgcctttat
cgtggcatgcaaagctctaaatcaggccagaatcttttcatctcttctgaggtatttcca
gaagctctgagctcgttctcagatgaccattcattccctttggtggagaggaagaactgc
aatgtggcaggaccttcaattacaagccagagtggaatcaacagtaatgggtttcgggct
ctggaggaggctttacttggagagcaacatgatgcgaggcttgaggacttgggagaggcc
tctgaccttttgggagatgagttgttgccccagctggaggcactagatcaggaagagagc
tccaatcactcctgggtaaatgcgggactggaaaatgtaggacaagatgatgacggagat
aaagtgaaggaaatagaggatgtaatcgatgtgccaattggtcacagcgcacggcctcct
aagaacactaatggtcccagcagtcaggtgcgggtactcagcccaccagtgaagagtagc
tcttcttcctcctcttcatcatcctcgtacgcatccgtgtccgagaaacgggtaaagaag
cggcagcagcagcagatggagtcgcccctttcggatgataaacaactaaaggccaatcga
ataatctcagaggccatcgctaaagcacgggagagaggagagaaaaatatcccacgcgtc
atgagtcccgaaagcttcccgtcttcatcgtcgcagcaccacagtcacaaggcggggggc
tccaaatccaaagccaagaataagagttccaagagtgcccggattgtggcgtcctccaag
cccaaacaaaagagtcaaattgggaaaatcgtaataaaatttgggaagaagaaacggaag
aaggcggattcctcagatgagctgtctgatgatgacagaccaccgcgaagatcttctaaa
gacaatgattcaaagcgacgttctaacaggaaggtcaagaggaagaagtatgaggaagac
ggggaggctcgactgtctgaagaagaaatgaaggtcatcgtcaaagccaagaagagctcc
aatgctcacaaagagcctaaagtgcaactctttgtggagaacccaagtgaggaagatgct
gctgtggttgataaaatcatggcatctcgcttggtgaaaaaagaggtttctcctggagtg
attgtggaatgtgaggagtactatgtcaagtacaaaaactactcatatcttcattgtgag
tgggcgacggagcaacatttagagaaagacaagaggatccagcagaaaatcaagcgcttc
aagatcaaacaggcacaaaaggcacacttctttgctgatatcgaggaggaaccgtttaat
ccggactatgtagaagtcgacagagttctggaggtctcgtactgtcaggacaaggatagc
ggagagccggtggtgtattatctggtgaagtggtgctcactgccgtatgaagacagcaca
tgggagctgaatgaagatgtggaccagagtaagatcgaggagtttaagcagctgcaggca
gtcaaaccacacacggatagaaaagaacgtcctccggcgagtcactggaagaagcgggag
caatcgcgtcagtattgtaatggaaattgtctcagggattaccagctggagggggtcaac
tggcttctcttcaactggtacaacaggcgtaactgtattttggctgatgaaatgggtctg
ggtaagaccatccagtccatcacatttctcgaggagatctatcgcacagggatcaagggg
ccatttttaatcattgccccgctctccaccatcactaattgggagagagagttcagaacc
tggacgaacctcaatgtcattgtctaccatggcagtgtggtgagcagacagatgctccag
cagtatgagatgtacttcagagactctcagggtcgtgtgataagaggtgcctaccggttc
caggcggtcattaccacatttgagatgattttgggaggctgtccagaactcaacgcaatc
gattggcggtgtgtcatcattgacgaagcccatcggctcaaaaacaagaactgcaagcta
ctggagggtttcaaactcatgagcctggaacataaggtattgttgacgggcaccccccta
cagaacacagtggaggaactctttagtctgctgcacttcctggagccaacccgttttccc
gctgaaaacaccttcatgcaggaatttggagacctcaagactgaggagcaggtccagaaa
ctccaggccatcctgaagccaatgatgctgcgtcgtcttaaggaggacgtggagaagaag
ctggccccgaaagaggagaccattatagaagtggagctcaccaacatccagaagaaatat
taccgtgcaatactggagaagaacttctcattcctggctaaaggcgccggccaagccaac
gtccccaacctgctcaacaccatgatggaactacgaaaatgctgcaaccatccctacctc
atcaaaggggctgaagaaaaaatcatggaagactttagggaagtttacagccccgcagcg
gtagatttccacctgcaggccatgattcagtcggcaggtaaactcgttcttattgacaag
ctgctgcccaagatgaaggcaggtggacacaaagttctcatcttctcccagatggtgcgc
tgccttgacatcctggaagactacctcatccagagaagatacctctacgagcggatagac
gggcgggtacgtggaaaccttcgtcaagcagcaatagaccgcttcagtaaacccgactct
gatcgattcgtcttcctgctgtgcacacgagcaggtgggcttggaataaacctcacagct
gccgacacctgtatcatctttgactcagactggaacccacagaacgacctgcaggctcag
gctcgctgccaccgaattggtcaggataaagcggtaaaggtgtatcgactaatcacacgt
aactcatacgagcgtgagatgttcgatagagccagtctcaagctgggattggataaggcc
gtgctacagagtatgagtgggcgggaaaacagtgtaggaggaggagggcaggtacaacag
cagctctccaaaaaagagatcgaggaccttttgcggcgtggagcttacggtgccatcatg
gatgaagaagatgaaggagctaaattttgtgaagaggacattgaccaaatcttgcaacgc
agaaccaagaccatcaccattgaatctgagggccggggctccacctttgccaaggccagt
tttgtagcttcagggaacagaacagacatctctctggatgaccccaacttctgggacaag
tgggcaaaggaagcagagattgatgtggacacggtcaatggcagaaacagtctggtgatc
gacacccctcgagtcaggaaacagacccggccgttcagcgccactaaggatgagctggcc
gagctgtctgaaggggagagcagtggagaggacaagcccaaactccggaggccacatgac
cgccttaacagctatgggcgcactgagtgcttcagggtggagaaaaatctgctggtgtac
gggtggggccggtggaaggatattttggcccacggacgctttaaacgacagctgaccgag
cgcgatgtggagtctatatgcagagcgctcttagcatactgcctcgttcattaccgtgga
gacgataaaatcaagggcttcatgtgggatctgattgctcccacggaggacggcaggacc
aaggaacttcagaaccatttaggtttgtcgacaccagtaccgcgtggcaggaaaggaaag
aagatgaagactcagtccagctcgtttgatattcagaaggcggagtggatccgaaaacac
aatccagagcacatgctgtctgatgacgggtacaagaaacatttgaaacatcactgcaac
aaggtgctgttgagggtcagaatgctgtactatctcaaacaggaggtgataggagcacag
tgccaaaaagtgctggatggagcagatgccagcgaggtggatatctgggttcctgagccg
gatcattcagagatgcctgctctgtggtgggacaccctcgcggacaaatgtctgctgtta
ggagtctataagcacggttatgagaaatacaacaccattcgcgcggatccagcactgtgt
ttcttggaaagggtcgggcggccggacgaaaaggccatagcagctgaacagagaggaaac
gactttatggatggggatgtggacgaccctgagtacaagcccgctccggccttgctaaag
gatgatatggaggatgatgcttcctctcctggagaactggtcatcactgatacagttgga
gaaggagggtctgtattagatggcggaggtggaaatctgagtgctagcacggggatatac
tggccctcaccctccactcttactgcacgactccggcgtctgatcaccgcatctcagcgc
tttaccaagagcagacagatacttcagatccaccagacacagacgcagaccacgaccccg
gccatctacactctgccccctatgctcaatgacgcacttaatcccaaaatggtggctaag
attgaaagacaacagcggtggacgcgaagggaggaggcagatttctaccgtgtggtttca
acatttggagtagtatatgatccggatttgggctgtttcgactggaccaagtttagagcc
atggctcgactgcacaagaaaactgacgagagtctacagaagtacctgtgtgcctttatt
gccatgtgcaggagggtctgccacctccctccaagagaaggagatatggtggacacctct
cttgctattcagccaatcacagaggagcgcgcgtcccgaactttataccgtgtggaattg
ttgcggaaaataagagaacaggtgctgcgtcaccctcagctgtatgagcgtctatccctc
tgccagtcaggaccagatcttccggtgtggtgggaagcaggatcccacgatcgggatctc
ctcctaggagcggccaagcacggggtcagccggacagactaccacatcctccgtgacccg
gagctgtgctttattgcagcccaaaggaactacagccagaaaaagggaagtctaccacca
gtccaagcccagaatcaggcactgtcactggggcagtctcacgtcccaagcccccttcag
cacgtcctggctaaagacgctactgcttcaccgctctcttatccgagagaggattcaagc
gaactgaaggacgagccgctgtcagagggagaggaggaaataggcaagagggagatcaaa
atggaaacgtcctctgtcagaccacccacgccatcaggagtggaggtgaaagacgaagac
ctcaaagaagtagagagtgagagacgaatggtggcggctagaacaaaacctctcacgcca
aactcagtggttcgaaagcagaaaaagctgagtaaacgcagccgcagggaggccaggagg
gcgtcgggatcagactccgactcggatggctcctcatccagttcttcgtcaagttcttca
tcgagatcttcttcctcatcctcgtcttcatcacggtcgggatctagttcctcttcctca
tcttcctcctgttcctcaggttcgtcgtcttcgtcgtcatcatcgtcatcgtcctcagac
aacagtgacagtgaggaggtaccaaagaatgtgtcagcagtgtctggtgttaaaggcttt
gatgaagacagtgtggcctcagtcagcgctacacaagatgacatgcaagatagtcatgtg
accaacggtatctcaaaccctccccaccctttccagggaggatatatgctcgctgcctcc
tactggccgaaggaccgtgtcatgataaaccggttggacagtatatgtcaggcggtgttg
aagggcaagtggccaggagttcggcgagcatacgaaggcaacgcagtgacttctttctac
accactaaactcctggacaacgcgggcactctggtggaggacccatcggcctcccctcag
ggttcaaaggtgaagaagcatgatgcagacagagaaaaggagttctcagtcaaaatcaat
aacgaaggcagccttaaactgactttccagaagcagggtttgcctctgaagcgccccctg
gagggtgaggagggacctcttgctcagcagcagtacctagccaggctacaagaactacag
aatgcatccgataccagcctagtagactacaccaaaacacagaacaactatccacagggg
atgtccgggcatatgcgactgaatggaatgatggatggacagcctgccataaaaaagaaa
agagggaggcgaaagaatgtggaggggatggatctgctattcatgaacaaaaacaggcct
ccaatgatggcagagcaggttcctgctggctggagtgctgtcgtcgcaggcacgtctgct
actgccggctcaagcacacctcagggacctgggtctctagacatagagagccgcgttccg
gtcatcagcctcaaagacggaacacgattggctggagaggacgctcctaaacggaaagat
ctcgaccagtggctgaaggagcatccaggctttgtggcagatgtgggcgcctttatccct
agtacaaataagctgcagtttcaagatggcagaccaaaacaaaagagacatcgctgcaga
aaccccaacaaaattgacatcaacagccttacaggagaagagagagtgcagattatcaac
aggcgcaatgctcgcaagattggtggagcatttgctcctccattaaaagatttatgtcgg
ttcctacaagagaatccagagtatggggtcccacctgagtgggctgatgttgtcaaacag
tcgggttatcttcctgaaagtatgttcgatcgcatcctgaccggcccaatcgttccagaa
gaggtgagccgacgaggtcgacgtcccaaaaacgctcttgcaaaaccagccacagcggcc
ggcgcaagtgccaatgcagctctggcactcaaccctgtcctgaccaatggcctcctcgga
gggttggatctgcctagtcttcaagcccttcagcacaaccttcagagcctccagtctctt
caactcatgggtctttctcaagacccagccaacatggccgccatgtttccaatgatgctg
tctggaatgcctgggctaccaaaccttcttgggatgagcggtctcctcggtggaaaaact
tctgaggaagcggcaggtgttgctttaccgggcgatgaggacgggagaaagaagagcagc
gtagactcaaccgctcccaaaggttcggcccagacttcaagtcccgaccgtaaagcggaa
aggacagagggtcaaagttccaaagccaccacctcgacggcaaccatttctaatcaaaca
agtgcttctgcttcgggccaccaactggccttcaacccccttctcctctctagtatgctc
tacccagggatgcttctttctccaggccttaacctgcctgtggccaatcagccgcaagct
gcaaacactcagccaaccccacaacctgctgcctctgaagccacgcccctacagcctggc
tgttcagaggagaaagacagtgacgaaggggaggagcctgacgacaagaaagataacagt
ggtccagagggctcggcgaaggcggattcgtcctcctccgagtccgacagctcctccgag
tcatccgaggattccgattccagcgatgaagactga
DBGET
integrated database retrieval system
