KEGG   Paramisgurnus dabryanus (large-scale loach): 135766729
Entry
135766729         CDS       T10799                                 
Symbol
rnf2
Name
(RefSeq) E3 ubiquitin-protein ligase RING2 isoform X1
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
pdab  Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pdab00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    135766729 (rnf2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pdab04121]
    135766729 (rnf2)
   03036 Chromosome and associated proteins [BR:pdab03036]
    135766729 (rnf2)
Enzymes [BR:pdab01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     135766729 (rnf2)
Ubiquitin system [BR:pdab04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    135766729 (rnf2)
Chromosome and associated proteins [BR:pdab03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     135766729 (rnf2)
    Noncanonical PRC1 (PRC1.1)
     135766729 (rnf2)
    Noncanonical PRC1 (PRC1.3/1.5)
     135766729 (rnf2)
    Noncanonical PRC1 (PRC1.6)
     135766729 (rnf2)
SSDB
Motif
Pfam: RAWUL zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 RING_XB3-XBAT31 zf-Nse zf-RING_5 zf-RING_4 zf-RING_6 zf-rbx1 zf-UDP TRAF3_RING DUF6674 zf-C3HC4_5 zf-ANAPC11
Other DBs
NCBI-GeneID: 135766729
NCBI-ProteinID: XP_065132209
LinkDB
Position
6:complement(23136345..23144124)
AA seq 347 aa
MKLSEGSTRINMTQTVQTNGVQPLSKTWELSLYELQRTPQEAITDGLEIAVSPRSLHSEL
MCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDAL
ISKIYPSRDEYEAHQERVLARISKHNNQQALSHSIEEGLKIQALNRQPRGKKHQIENGSG
AEDNGDSSHCSNASVHSNQEAGPSIKRTKTSDDSGLDMDNATENGGGDLALDGASEIELV
FRPHPTLMEKEDAAQTRYIKTSGNATVDHLSKYLAVRLALEEMRKNAEASPINVEAASEK
QYTIYIPTANNQFTVLNGSFSLELVSEKYWKVNKPMELYFAPTKEHK
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgaaactaagtgaaggatccacgcgtataaacatgacacagacagtacagacgaatggg
gtccaacccctaagcaagacctgggaactcagtctttatgaactacagagaactccacag
gaggccatcacggacggtctggagatcgccgtgtccccacgcagcttgcacagtgaactc
atgtgtcccatctgcttggacatgctgaaaaacaccatgaccaccaaggagtgcctacac
cgcttctgtgctgactgcattatcaccgctctcagatcaggaaataaggaatgtccaacg
tgcagaaagaagctggtgtctaagcgctcgctccgtcccgaccctaacttcgatgccctg
atcagtaagatttacccgagcagagacgagtacgaggcccatcaggagagagtgctggcc
cgcattagcaagcacaacaaccagcaggcactcagccacagtattgaagaaggccttaaa
atccaggccttgaacagacagccgcggggtaagaagcaccagattgaaaacggcagtggg
gcagaggacaatggggacagctcacactgcagtaacgcatcagtgcacagtaaccaggag
gctgggcccagtatcaaacgaaccaaaacttcagacgactcggggcttgacatggacaat
gccacagaaaacggtggaggtgacttggcactcgatggggccagtgagattgaactggtg
tttcgtcctcacccaacgttgatggagaaagaagatgctgcacagacacggtacatcaag
acgtcagggaatgcgacggtggatcacctctccaaatacctggccgtcagactagctctc
gaggaaatgcgcaagaatgcagaggcaagccccatcaatgtagaagcggccagtgaaaaa
cagtataccatctacattcccacagccaacaaccagttcacagtcctgaacggttccttt
tccttggagctggtgagcgagaagtactggaaggtcaacaagcccatggagttgtacttc
gccccaacaaaggagcacaaatga

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