Paramisgurnus dabryanus (large-scale loach): 135766874
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Entry
135766874 CDS
T10799
Symbol
u2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135766874 (u2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdab03041
]
135766874 (u2surp)
Spliceosome [BR:
pdab03041
]
Complex A
U2 snRNP components
U2 related factors
135766874 (u2surp)
Complex B
135766874 (u2surp)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
DUF2299
Motif
Other DBs
NCBI-GeneID:
135766874
NCBI-ProteinID:
XP_065132443
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All DBs
Position
6:complement(26105880..26118517)
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AA seq
967 aa
AA seq
DB search
MADKTPGGAQKASSKALLESKLKAFSIGKMAVAKRTLSKKEQNELKKKEDEKAAAEIYEE
FLAAFEGGEGKVKTFVRGGLANATKEEAVADDKKGKLYKPKSRVPEPKSFLPLETPPQFL
AFDKRNAAKKMAEKEKKKSNLELFKEELKQIQEERDERHKLKGRVSRFEPLPTTEGRRST
DGSSRRNRPSSVLDESAPGSHDVGDPTTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKI
MWPRTDEERARDRNCGFVAFMTRRDAERALKNLNGKMVMNFEMKLGWGKGVPIPPHPIYI
PPSMMEHSLPPPPSGLPFNAQPRERLKNPNASMPPPPKSKEEFEKTLSQAIVKVVIPTER
NLLSLIHRMIEFVVREGPMFEAMIMNREINNSLYRFLFENQSPAHVYYRWKLYTILQGES
PTKWKTEEFRMFKNGSIWRPPPLNPYLHGTPEDEEREDDVEDDTSKKGSLKDDERDKLEE
ILRGLSPRKSDVAEAMLFCLQHADAAEEIVECIAESLSILKTPLPKKIARLYLVSDVLYN
SSAKVANASYYRKFFEAKLCQIFSDLNATYKTIQGHLQSEHFKQRVMTCFRAWEDWAVYP
DPFLIKLQNIFLGLVSLDPDKEIVELIPEPPVTSLDIDGAPIVEEELDGAPLDDVDGTPI
VLAQIDGAPLDDLDGVPIKGVDDDLDGIPFDQKPGFKVAPSKWEAVDGAALEAQAVTTSK
WEVFDQPEESEKSKERTTRETESKDSLKSSSAAEQQSYINPAREEYDTKSAKFSEMSEEK
RAKLREIELKVMKFQDELESGKRPKKSGQSIQEQVELYRDKLLQREREKETEKDRDREKE
RKDKEKLDVSHKEKDKDDATPSRKEKKRRHSPSPSPTRSSSSRRGRSPSPRSERSDRSYT
KESLRSSYKDSPRESSRKSSKRSPSPPKTPKRSRRSRSRTPKKSSKKSRSRSRSPHRSHK
KSKKSKH
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaaacgccaggtggggcgcagaaagccagctcaaaggctttattggaaagt
aaattaaaggcctttagtatcggcaagatggcagttgctaagagaacactaagtaagaaa
gaacagaatgaactgaagaagaaggaggatgaaaaggccgctgcagagatctatgaggaa
tttcttgctgcctttgagggaggtgaaggaaaggttaagacttttgttcgtggtggcctt
gctaatgctactaaagaggaggcagtagccgatgacaagaaaggaaagctttacaaaccg
aagtcaagggtgccggagccaaaaagttttttgcctttggaaactccaccacagtttttg
gcatttgacaaacgcaatgcggcaaagaagatggcagagaaggagaagaaaaagagcaac
cttgaactctttaaagaagaattaaaacagatacaggaagagcgtgatgaacgtcacaag
ttgaagggcagagtcagtcgttttgagcctcttcccacaacggaaggacgacgatctacg
gatggttcttcaagaagaaaccgtccgtccagtgttttggatgaatcggctcctggctca
catgatgttggtgatccaacaactacgaatctttatttagggaatataaatcctcagatg
aatgaggaaatgctatgtcaggaatttggtcgctacggtccattagcaagtgtgaaaatt
atgtggcccaggactgatgaggagagggccagggacagaaactgtggctttgtagccttc
atgacaaggagagatgctgaacgtgcacttaagaatttaaatgggaaaatggtaatgaat
tttgaaatgaaactgggatggggcaaaggtgtaccaattcctcctcaccccatatacatt
ccaccttcaatgatggagcacagcctcccgcctccaccctctggactgcccttcaatgcc
cagcccagagagaggctcaagaaccccaacgcttctatgcctccccctccgaagagcaaa
gaggagtttgagaagactctgtcgcaagccatagtcaaagtggttatcccaacagaaagg
aatttgctctctctcatccatcgaatgatcgagtttgtggtgcgtgagggacccatgttt
gaggccatgatcatgaaccgagagatcaacaattcactctatagatttttatttgaaaat
caaagtcctgctcatgtctattatcggtggaaattgtacacgatattacagggtgaatct
ccaacaaaatggaaaactgaggagttcaggatgtttaagaatggatccatctggcgacca
ccccctctcaacccgtacttgcatggcactcctgaagatgaagagcgtgaagatgacgta
gaagacgacaccagcaagaaggggtccttaaaagacgacgaaagggataaactggaggag
attcttcgaggtctctcgccgaggaagagtgacgtagctgaagccatgctgttctgcctt
caacacgctgatgcagctgaggagattgttgaatgcattgctgagtctctgtccatactt
aaaacgcctttgccaaagaagattgcaaggttatatttggtgtcagatgtgctgtataac
tcatctgcaaaagttgctaatgcctcttattacagaaaattctttgaagcaaaactttgt
cagatattttctgacctcaatgccacttacaagacaatacaaggccacttacaatcagaa
cattttaagcaaagagtaatgacctgtttccgtgcatgggaggactgggcagtttatcct
gatcctttcctgattaaacttcagaacattttcctgggacttgttagtcttgatccggac
aaggaaattgtagagctgattccagagccaccagtaaccagcctcgacattgatggtgct
cctattgtggaggaggagctggatggtgctcctctggatgatgttgatggcacacctatt
gttctggcgcaaattgatggtgcacctctagatgacctggatggagtgcctatcaaggga
gtagatgacgatctggatggcattccttttgatcaaaaaccaggttttaaggtagcccca
tcaaaatgggaagcagtggatggtgctgctttagaagcgcaagctgtaaccacatcaaaa
tgggaggtctttgatcagcctgaagaatctgagaagagtaaagaaaggacaacacgtgaa
actgagagcaaagactctctgaagagctccagtgctgcagagcaacagtcctacattaat
cctgctagagaagaatatgatacgaaatctgcaaagttctctgagatgagtgaggagaaa
cgtgccaaacttagagaaattgagcttaaagtcatgaagtttcaagatgagcttgaatct
ggaaaaaggcccaaaaaatctggacaaagtattcaagaacaagtagagctttatcgggac
aagttactacagagggagagggagaaggagacagaaaaagacagagaccgtgagaaagag
agaaaagacaaagagaaattggatgtatcgcataaggaaaaggacaaagatgacgctaca
ccaagcagaaaagaaaaaaaacggaggcacagtccttcacccagtcccactcgaagtagc
agcagtagacgtggcagatcgccatccccacgatcagagcgctctgatagatcctataca
aaagaaagccttcgatcttcctataaagattctcctagagaaagcagccggaagtcatct
aaaaggtctccttccccaccaaaaacgcctaaaaggtcacgcaggtccagatcaagaaca
cccaaaaaatcttcaaagaaatccagatctcggtcacgatcgccgcaccgttctcacaaa
aaatccaagaaaagcaaacactga
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