Paramisgurnus dabryanus (large-scale loach): 135767036
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Entry
135767036 CDS
T10799
Symbol
tnn
Name
(RefSeq) tenascin-N
KO
K06252
tenascin
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04510
Focal adhesion
pdab04512
ECM-receptor interaction
pdab04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135767036 (tnn)
04518 Integrin signaling
135767036 (tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135767036 (tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pdab00536
]
135767036 (tnn)
Glycosaminoglycan binding proteins [BR:
pdab00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135767036 (tnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
EGF_TEN
EGF_Teneurin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
EGF_2
EGF_Tenascin
Pur_ac_phosph_N
DUF4998
Fn3_Dep-1_2nd
Fn3_VIN3
Interfer-bind
DUF7949
SdrD_B
EGF_PEAR1L
YPEB_PepSY1-2
EGF
Motif
Other DBs
NCBI-GeneID:
135767036
NCBI-ProteinID:
XP_065132689
LinkDB
All DBs
Position
6:complement(32364655..32406062)
Genome browser
AA seq
932 aa
AA seq
DB search
MIIRFNRPKRCLFLLGMLFMLSRLAFSEDEVGAEKGVTFSHVYRIDSGCKQGSQEGQLSQ
DQASEGQSFTVNGENDIVFKHNIRLKSSSCGCADSEDFKSLLYRVNGLEEEVAYLKTQCA
QGCCKGGSGVDTSCSGHGTYEPDLCSCKCYPGWEGPDCSISSCPDECNDNGRCVDGRCVC
HEGYTGHDCSLLTCPGDCSDKGHCVDGKCVCFSGFSGDDCSVASCLNNCVGNGRCVDGQC
ICDEGFFGDDCSMVLGPKGLRLIKVTDVSLLVEWESVRGAEYYILSYYPKGDQGAIKEVQ
VENTENSYLITGLKPGVTYIVQVHAVIRGIKSESDQIVATTDVSGVDGIQVLGQTEDSIQ
VDWENPAVGVDHFKLIHASPDGQEGLEKVAMSQEARTMHTIVGLNPGTEYQISVQAIKGE
MEGKPSNATGVTDIDAPTNLATKEVTENSATVTWYAVRADIDGYILTYSSAEGTSNEIKV
RADATSHQLTSLKPGVVYTVFLWAYKGYRSSRKSTTEAETEIDAPTNLLTKEVTEDSALV
MWKKVQADIDGYMLSYSSADGSSQEVRVGADTTSYGFTGLKPGVVYTVYVWAVKGSRSSR
KATTQAETEIDAPKDLKAIDVKTETSTITWNAPQARIDGYILTYRAEDGTTQTVERKLTA
GDTRFALSGLAMGKKYSVTIIAYRGSKGSKIVETVFSTVGLSYPFPMDCTQIMKNGNLES
GVYTIYVNNNRSKTMQVYCDMTTDGGGWIVFQRRNTGKLEFMRRWREYMKGFGELTEEFW
LGLEKIHELTNTTTQYEARFDVGYGSDRVYAVYDNFKVASSKQKFKLTIGKYRGNAGDAM
TYHQGGLFSTVDSDNDIALGNCALTHQGAWWYKNCHLANLNGKFGDNRHSMGVNWEPWKG
HLQSLDFSEIKIRPVGAGSRNKRSLKRRVSVY
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcagatttaaccggccaaagagatgtctcttccttttggggatgctcttcatg
ctgtcccgcctcgcattctctgaggatgaggtcggggcagagaaaggagtcacgttcagc
catgtctacaggattgactctggttgtaagcagggttcccaggagggccagctgtctcag
gaccaagcttcagaaggacagtcatttacagtaaatggggagaatgacatcgtcttcaaa
cacaacatacgcctgaagtcaagcagttgtgggtgtgcagactcagaggacttcaaatct
ctgttgtatcgcgtgaatggcctggaagaggaggtcgcctatctgaagacccagtgcgct
cagggctgctgcaaaggaggctcgggtgtggacaccagctgcagtggtcatggcacctac
gagcccgatttgtgcagctgtaaatgttatccaggttgggaaggtccagactgctccatc
tcatcctgtccagatgaatgcaacgataacggccgctgtgtggacggacgctgcgtctgc
cacgaaggctacaccggccatgactgcagcctgctcacgtgccctggagactgcagcgat
aaaggccactgtgtggatggcaaatgcgtgtgcttcagtggattctccggagatgattgc
agtgttgctagctgtctgaataactgcgtaggaaacggacgctgcgtggacggccagtgc
atctgcgatgagggattttttggagacgactgctccatggttctaggtccaaaaggtctc
cgtctgatcaaagtcacagatgtgtctctgttggtggagtgggagtctgtcagaggagct
gagtactacatcctctcctattatcctaaaggagaccagggagccattaaagaggtccag
gtggaaaacacggaaaactcctacttaatcacaggcctcaagcccggagtcacatatata
gtgcaggtgcatgctgtcatcaggggcattaagagtgaatccgaccagatagtggccacg
actgatgtctctggtgttgatgggatccaagtgttgggtcagactgaagactcaatccag
gtggactgggagaaccctgcagtcggagtggaccacttcaaactgatccatgcaagccca
gatggccaggagggactggagaaagtggcaatgagccaggaggccaggaccatgcacacc
attgtaggtctaaacccaggaacagaatatcagatatcagtgcaagcaatcaaaggtgaa
atggaaggcaaaccatccaatgccacaggagtcacagacattgatgctccaaccaatctg
gcaaccaaggaagtgacagagaattcggcaactgtgacatggtatgccgttcgtgcagat
attgatggctacattctgacctattcttctgctgagggcaccagcaatgaaattaaagtg
agagcggatgctacctctcaccagctgacatctctgaagcctggagtcgtgtatacggtt
ttcctctgggcatataagggctatcgctcaagcaggaagagtacgactgaggctgagacg
gaaatagacgctcctaccaacctcttaaccaaagaggtgaccgaggactcagcgttggtg
atgtggaaaaaggtccaggctgacatcgacggctacatgttaagctacagctctgcagat
ggatccagtcaggaagttcgagtcggcgctgacaccacctcttacgggttcactggtctg
aagccgggagttgtctacacagtctacgtctgggctgtgaaaggctctcgatccagcaga
aaagccacaacccaagccgaaacagagatcgatgcacccaaggacctcaaagccattgat
gttaagacggagacgtccactataacatggaacgctccccaagccagaatcgacggctac
atactgacatacagggctgaggatggcaccacacagactgtggagagaaagttgaccgca
ggggatactaggtttgctctctctggccttgcaatgggcaaaaagtacagcgttaccatt
attgcctataggggctcaaaggggagcaaaatagtggagacagtatttagcacagttggt
ctgtcctacccgttccccatggactgcactcagattatgaagaatggaaacctggagagt
ggagtgtatacgatctacgttaataacaaccgtagtaaaaccatgcaggtgtactgtgac
atgacgaccgatggtggcggctggattgtgtttcagagaagaaacacgggcaaattagaa
ttcatgagacgttggagagagtatatgaaaggcttcggagaactgacagaggaattctgg
ctcggcctggaaaagattcacgagctgaccaacactaccacgcagtacgaggcgcgtttc
gacgtcggctatggatccgatcgggtttatgcagtctacgataacttcaaagtggcatcg
tccaaacaaaaatttaagctaaccattggcaaatacagaggaaatgctggtgatgctatg
acttatcaccaaggaggacttttctccacggttgattcagacaatgacatcgcacttgga
aactgtgctttgactcaccaaggagcctggtggtataaaaactgccatctagccaacctg
aacggcaaatttggggacaacagacacagcatgggagtaaactgggaaccatggaagggt
cacctgcagtctcttgacttctccgaaataaagatccggcccgtgggagcaggaagcaga
aataagagatctctgaagaggagggtatctgtgtattaa
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