Paramisgurnus dabryanus (large-scale loach): 135767348
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Entry
135767348 CDS
T10799
Symbol
acin1a
Name
(RefSeq) uncharacterized protein acin1a isoform X2
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03013
Nucleocytoplasmic transport
pdab03015
mRNA surveillance pathway
pdab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135767348 (acin1a)
09122 Translation
03013 Nucleocytoplasmic transport
135767348 (acin1a)
03015 mRNA surveillance pathway
135767348 (acin1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135767348 (acin1a)
03041 Spliceosome [BR:
pdab03041
]
135767348 (acin1a)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
135767348 (acin1a)
Spliceosome [BR:
pdab03041
]
Complex C
Other components
EJC/TREX
135767348 (acin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
135767348
NCBI-ProteinID:
XP_065133063
LinkDB
All DBs
Position
6:35818696..35839729
Genome browser
AA seq
1868 aa
AA seq
DB search
MADLEDVTLDGRPLQSLRVADLKAALEERGLPKSGQKNALVKRLKGALMLENLQKTSSHH
IGLQPNSRIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAAENDGTDQEDHTEANDSTV
CPAPNQDVAPTLVDQHKPTASEGNEQRDKEMPGQPSPSTPAQPGAIASLSVRVVGERGPT
SSHVPADSDDDSGDDDEEEWKTNAQRSRQAELPKKQPVRERSSGSQQQQPPPQHIPLLSQ
QLRQPTPPPSPPPELSFPLPDTPKQSPPSPGEPPSRQRMSSSSSSGSSSSDSRSSSPEPA
GDSTERRPGPLTLLARKMASEGAFSGTGKHGREGVDRQSAITHTANAASVLSYPSSVISN
QGVSVVRTAVIDGSNALEQDGESRHSLEQENEKRQRQKEKERMKALEKEREERALEQERR
EREEALKREREERERALELQRIERERLEREQALERERQEKERLEKEKALERERLEQERIE
REQARERERLERERIKREKALEKERIEREQALERERIEREQALERERIEREQALERERIE
QERIEKEQALERERIEREQALERERIERERIEREQALERERIEQERIEREQALERERIER
EQALEKERLEREKIEREKALERERLEREQALEKERLEREKIEREQALERERLEREKIEKE
QALEKERQEREKIEREQALERERLERERVEREQALEKERLEREKIEREQALERERIERVQ
ALEKERLEREKIEREQALERERIEREQALEKERLEREKIEREQALERERLKQERIEREQA
LERERVEREQALERERIEREQALEKERLEREKLEREQALEKERLEREQALEKEKLEKEKA
LEKERLEKEKIEREQALEKERLEREATLEQQKQEKKAKEQERLERKKSLEREQLEKEKAL
EQERLQKEQALEREKEAQRKAEQEREQALEKEREEKALKEEKERTLAEKEQKRIQDEKEK
ALKHEKDEEREKERESRLPPWKRGRDISGFSRSVAKTPESHSGKPGGSEDGDSQSVSNDS
RSTESVPQKSPTPVTPSSPQSSSKKSRILRDAPLTTPLPSSPASVLKRPRTFSDRPMPQV
PIIPLATKPEEEVQEDAAQDPQTSLQTVSQGVLVSAPHELETKSPDAAVQKHASQQKEKE
ETSKAGREIQDNEEDTKHETVRKVRDEEQPPSSPPEKKRERENVKKDVEKRERKSSSSSS
DSSSSDSDSGSSSSSRSSSSSSSSQEKTHSIPDVRKSKDIQKDISSRNTEKDSPPVAVIE
KPPTAQRKKRVFTEQEEKDVSNVDVIQTKRPCIELQEEKTTGLKKEDNGEDETMDNTTSS
EVKEAVMAEPEKLPEGSEESTTPKTFSARRISLGSSKPSPGVGSSEGEVESASVSASGRK
RRWGSSTAVTAKKPSISITTDSLKSLIPDIKPSLGQEAVLDLHPEEMHLSGEEEGGERGD
QDLKIRRTVTQVVPSDTQENGQKESKRSDREDEEERNDRQHRLSQEEKTENSVQISVDAE
MSPPGRDVDTKTVTPSDTLIRRSISQQKSGVSITIDDPVRTAKHTSPPRGKLSNIVHICN
LVRPFTLGQLKELLNRTGAVVEEAFWIDKIKSHCYVTYSSAEEAMATRAALHGVKWPQSN
PKFLSVDFCLQEELDFHRGLGPAGEKPPEEARGASATGPGRTVPQPLLPDRDQWAEREKE
MERRERARAEREWDRDKVRDFTKPGEEREAGARRSRSRERERRRKERGKSKERKTEKKEK
APEEPPAKLLDDLFRKTKAAPCIYWLPLNEEQAAQRVEARAERMREREKRRKEMEEEEDK
KREEERRERTKTGGATGGENERERDRGREREREADKRREGYRRPAGNSASGSRRSRSRSD
PPPRDRRR
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgaagatgtaacgctggacgggaggccgctccaatcgctccgggtggcg
gatttgaaagccgcgctggaggagagagggcttccgaaaagcggacagaagaatgccctc
gtcaagaggctcaagggggctctcatgttggagaaccttcagaaaacctcctctcatcac
atcggcctgcagcccaactcccggattggggaggaaatgagccagaacagttttattaaa
cagtacctggcaaaacagcaagagctgctcagacagcgtttggagagagaggcacgagaa
gctgcagaaaatgatgggacagaccaggaagaccacacagaggccaatgacagcacagtc
tgtcctgcccctaatcaggatgttgctccaaccttagttgaccaacataagcctacagca
agtgagggcaatgagcaaagagataaagaaatgcccggacagccatcaccctccacacct
gcccaacctggggcgatagcctctttgtcagtgcgggttgttggtgaaagagggccgact
tcaagccacgtaccagctgacagtgatgacgacagcggagacgatgacgaggaagagtgg
aaaacgaatgctcagcggagtcgtcaagcagagctgccaaaaaaacaaccagtgagggaa
agatccagtggttcacagcagcagcagccacccccccaacacatacctttgctatcacag
cagctcagacagcccactccaccaccgtctcctccacctgaactttctttcccactccca
gacacccctaaacagagccctcctagtccaggagagcccccgtctaggcaacgcatgtct
agctcttccagctctggtagttcaagtagtgacagccgtagcagtagccctgaaccagca
ggcgactccacagaacgcagacccggacctctgaccttactggcacgtaaaatggcatct
gaaggagctttttctgggacgggcaagcatggtagggagggggttgataggcagtctgca
atcacccacacagcaaatgcagcatcagttctgtcataccctagttcagtgatctccaac
cagggagttagtgttgtcaggacggcagtgatagatgggagcaatgccttggagcaggat
ggggaaagccgtcattcattagagcaagagaatgaaaagcggcaaagacaaaaagaaaaa
gagaggatgaaagctcttgaaaaggagagagaggaaagggcactggaacaggaaagacgt
gagcgcgaagaagctctcaaacgggagagggaagagagagagagggctttggaactacag
agaatagagagagaaagactggagcgagaacaggctctagaacgagaaaggcaagaaaaa
gagagactggaaaaagagaaagctttagaaagggagagactggaacaagagaggatagaa
agagagcaagctagggagagggagaggctagagcgagagaggataaaaagagagaaagct
ttggagaaagagaggatagaaagagagcaagctttggagagggagaggattgaaagagag
caagctttggagagggagaggattgaaagagagcaagctttggagagggagaggatagag
caagagaggatagaaaaagagcaagctttggagagggagaggatagaaagagagcaagct
ttggagagggagaggatagagcgagagaggatagaaagagagcaagctttggagagggag
aggatagagcaagagaggatagaaagagagcaagctttggagagggagaggatagaaaga
gagcaagctttggagaaagaaagactggagagagagaagatagaaagagagaaagctctg
gagcgagagaggctagaaagagagcaagctttggagaaagaaagactggaaagagagaag
atagaaagggagcaagctctggagagggagagactggagcgagagaagatcgaaaaagag
caagctttggagaaagaaagacaggagagagaaaagatagaaagagagcaagctctggag
agggagagactggagcgagagagggtcgaaagagagcaagctttagagaaagaaagactg
gagagagagaagatagaaagagaacaagctctggagcgagagaggatagaaagagtgcaa
gctttggagaaagaaagacttgagagagagaagatagaaagagagcaagctctggagcga
gagaggatagaaagagagcaagctttggagaaagaaagacttgagagagagaagatagaa
agagagcaagctctggagagggaaagactgaagcaagagaggatagaaagagagcaagct
ctggagcgagagagggtagaaagagagcaagctctggagcgagagaggatagaaagagag
caagctttggagaaagagagactggagagagagaagctagaaagagagcaagctttggag
aaggaaagactagagagagagcaagctttggagaaagagaagctagaaaaagagaaagct
ttggagaaggaaagactggaaaaagagaagatagaaagagagcaagctttggagaaggag
agactggagagagaagctacattggagcaacaaaaacaagaaaaaaaggccaaggaacag
gaaagattggaaagaaagaagtctttggagagagaacaacttgaaaaggagaaagctttg
gaacaagaaaggttgcaaaaagaacaagctcttgagcgtgagaaagaggcacaaaggaaa
gcagaacaggagagagagcaagcattggaaaaagaacgagaggagaaggctctaaaggaa
gaaaaggagagaacattggcggagaaggaacaaaaaagaatacaggatgaaaaagagaag
gctttgaaacatgaaaaagatgaggaacgagagaaagaaagagaaagccgtcttcctcca
tggaaacgtggtcgtgatattagtggtttctcccgttcagtggctaaaactcctgagagt
cattcagggaagcctggtggtagtgaggatggggattctcaaagtgtcagcaatgattct
cgatctacagaatctgtcccacaaaagtcacccacacccgtaacaccatcatcccctcag
tcctcctctaagaagtctcgtatcctcagagatgctcctttgactactcctctcccatca
tctccagcttctgtgttgaagagacctcggaccttctcagacagacctatgccacaagtt
cccataattccgttagcaactaaacctgaagaagaagtgcaagaagatgctgctcaggac
cctcaaacatcactgcagactgtcagccagggagtccttgtttcagctccccatgagcta
gagaccaaatccccagatgcggctgtccaaaaacatgcatcacaacagaaagagaaagag
gagacatcaaaagcaggcagagagatccaggacaatgaagaagacactaagcatgaaacc
gttaggaaagttagggatgaggaacaacctccttcatcgccaccagagaagaaaagagaa
agggagaatgtaaagaaagatgtggagaaaagagaaagaaaatcatcatcctcatccagt
gatagttcctcatctgactcagattctgggtcttcttcctcttcacgttcctctagttcg
tcatcatcctcgcaggagaaaacccactctattcccgatgttaggaagtctaaagacatc
cagaaagatatttcatctcggaacacagaaaaagatagcccacctgtggctgtgattgaa
aagcctcctacagcccagcgtaaaaaacgtgttttcacagagcaggaggagaaagatgtg
agcaatgtagacgtcattcagactaagaggccctgcattgagctgcaggaggagaagaca
acaggattgaaaaaggaagataatggggaagatgagactatggacaacactacaagtagt
gaggtgaaggaagcagtcatggctgagcccgagaagcttccagagggcagtgaggagagc
accacgccaaagaccttctccgcccggagaatctcgcttggcagtagcaaaccatctcct
ggagtgggaagttcggaaggggaagtggagagcgcgagcgtgtctgcttctggtaggaag
aggagatggggctcaagtacagccgtcactgccaagaaaccttcaatcagcatcaccaca
gactctcttaaatctttaattcctgacatcaagcctagcttgggccaggaggctgtttta
gacctgcatccagaggagatgcatctttcaggcgaggaggaaggcggagagagaggcgac
caagacttgaaaatcaggcgaactgtaacacaggttgtgccctctgacacacaagagaat
ggacagaaggagtccaaaagaagcgatcgtgaagatgaggaggaaagaaacgaccggcag
cacagacttagccaggaggagaaaacggaaaactccgttcagatttctgtggatgcggag
atgtccccccctggccgtgatgtagatacgaagaccgtgactcccagtgacacactgatt
cggcgatccattagccagcagaagtcaggagtgagcatcaccatcgatgacccagtccgc
acagccaagcacacctctcctcctcgtggcaagctttctaacatcgtccatatttgcaat
ctggtgaggccgttcacgctggggcagttgaaggaactgctaaaccgcacgggcgctgta
gtcgaggaggctttctggatcgacaagattaaatctcactgttacgtcacatactccagc
gcagaagaggcgatggccacacgggcggcactacatggggttaaatggccccagagtaac
ccaaagttccttagtgttgacttctgcctgcaggaggagttggacttccacaggggtctg
ggtccagccggagaaaaaccaccagaggaggcacgcggggcgtcggctaccgggccaggc
cgtacggttccccaacctctccttccagaccgtgaccagtgggcagaacgagagaaggaa
atggaaaggcgtgaaagagcgcgtgcggaaagggaatgggaccgggataaggtgagagac
ttcaccaaacccggagaagaacgggaggctggggccaggcggtcgcggtctagagaacgt
gagaggcggcgcaaggagagagggaagagcaaagagagaaagacagagaagaaggaaaaa
gctccagaagagccaccggcgaaactgctggatgacctgtttcgcaaaaccaaagcggca
ccctgcatatactggctcccgcttaatgaagaacaagcagcacagagggtagaggctcgt
gccgagcgcatgagagagagagaaaagcggagaaaggagatggaagaggaggaggataaa
aagcgcgaagaggagcgcagagagagaacgaagaccggcggagcgaccggaggagagaac
gagagagagcgcgacaggggtcgagagagggaacgcgaggcggataaacgacgagaagga
tatcgcaggcctgccggaaacagtgcgagcgggagcagaaggtcaaggagccggagtgac
cctccgcccagagaccgacggcgctaa
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integrated database retrieval system
