Paramisgurnus dabryanus (large-scale loach): 135767792
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Entry
135767792 CDS
T10799
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03013
Nucleocytoplasmic transport
pdab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135767792 (thoc6)
09122 Translation
03013 Nucleocytoplasmic transport
135767792 (thoc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135767792 (thoc6)
03041 Spliceosome [BR:
pdab03041
]
135767792 (thoc6)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
135767792 (thoc6)
Spliceosome [BR:
pdab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
135767792 (thoc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
WD40_Gbeta
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
EIF3I
Beta-prop_CAF1B_HIR1
WDR54
Beta-prop_WDR36-Utp21_1st
Beta-prop_SCAP
Beta-prop_IP5PC_F
Beta-prop_ACSF4
WD40_like
Beta-prop_WDR90_POC16_2nd
Beta-prop_NOL10_N
Beta-prop_HPS5
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
135767792
NCBI-ProteinID:
XP_065133309
LinkDB
All DBs
Position
3:28045852..28049804
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AA seq
323 aa
AA seq
DB search
MGPVELLHMSVFSQSFSPCGRYLAAGNNYGEIAVFSLSAALSPDTSKGSQKPILNFTAHD
GPVFSLLSTDTHLLSAGNGEISAWSWTELIKKNTKAAWTRKPSYETSLEIPEINATIINP
KDNSLIVGGGDNNLHVMDMETGIFKSVLKGHTDYIHCLCFREREGEILSGGEDGAVRIWD
ARTNRPVHCIEVFKYEECARPQFGKWISCLATDSDWMLCGGGPSLSLWHLRSMSPTSVFP
LPGCQREAVFYQDLIFAVGEGPNVSHCLHGGTVKAQIPCTPSSLNTLALNLKNTEHRVMT
VGGSSNQIDVFTNFSYRAFSLSF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgggtccagttgagctcctgcacatgtccgtgttctcgcagagtttctctccctgcggt
cgttaccttgcagcgggtaataactatggagagatcgcagtgttcagcttatcggctgca
ctgagtccagatacatcaaaggggagtcagaagcccatccttaacttcactgcccatgat
ggtccagtgttttctcttctctccacggacactcatctcttaagcgctgggaatggagaa
ataagtgcctggagttggactgagctcattaaaaaaaataccaaagctgcctggacaaga
aaacccagttatgagacgagtcttgaaattccagagattaatgcaaccatcattaatcca
aaggacaacagtttaatagttgggggtggtgacaataatcttcacgtcatggacatggag
actggaatctttaagtcagtattaaagggtcacactgactacatccactgcctatgcttt
cgtgagagggaaggagaaattctctctggaggtgaagatggtgctgtcaggatatgggat
gctcgtacaaatcggccagttcactgtattgaagtttttaaatatgaggaatgtgcacgc
ccacagtttgggaagtggatcagctgtcttgctacagactccgattggatgctatgtggt
ggagggccttctctttctttatggcacctccgttctatgtctcctacctcagtcttccca
ttgcctggctgtcaaagagaagctgtattttaccaggatctgatctttgcagtaggtgag
gggccaaatgtatctcactgcttacatggggggaccgtcaaagctcagattccctgcact
ccctcttcgctcaacacactggctctcaatctcaaaaacactgaacacagggttatgact
gtagggggcagcagtaaccaaattgacgttttcaccaacttcagttacagagcattttct
ctgtcattctga
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