Paramisgurnus dabryanus (large-scale loach): 135768163
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Entry
135768163 CDS
T10799
Symbol
spg11
Name
(RefSeq) spatacsin isoform X1
KO
K19026
spatacsin
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdab03400
]
135768163 (spg11)
DNA repair and recombination proteins [BR:
pdab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
135768163 (spg11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
135768163
NCBI-ProteinID:
XP_065133400
LinkDB
All DBs
Position
23:945018..969802
Genome browser
AA seq
2377 aa
AA seq
DB search
MLEVLNSSDQALEVDLLLCDHDVCDSVDIRLAKGSSFMCCLDSEGKLSLINICDSSSSVH
KLHEASYTDFCWEDLSDHNRHNVNPNLLAVDSQCNLRLYKVVSHGQVVLVSEVSSDSLLE
SVKDNQSEMAEMRTVRLLSFTDGRCLLLVNTCVVIQVRWIQESSHLESLSSCRLSLTPQI
QDMCVDYHLCRAILFVLLSTGVTYVFDSTDGKLLATVDFLSYCGLGQTDTDSSPPVTCCL
FQISHDLNTAVVVTCQNQALAIDLNDYFRMYPDHLCCRAAPNRPFLRPVESWDHDSLSSS
AHSLLVLDTQLQTDRSWESRLSSLYSGCKTLKRPGHSSPWYRDFPHVECHRAAATAKLSR
PSVKQGGAVMCFNVPKRATAAMLTVSEFSAVVTFVAPENSNTCVAYWDLESQNVTYHHTD
TPAVPVQRSAEEHLCLLMKRSGLSVVLFCVTQEELLNRLMVFGTAGTVDSLCHLNTWGRC
SIPIHALQAGLKNHQLDTVDFFLKSKENILSPASGFVLPDQTSSVSSQTQLRNIHALCPA
LDLLRSAIQDTHTEAQSRQFCEQLLSITLTFLNTQSRVLLTSTHELDVHLQECVQILDGY
ISDLRAYMKKYPFSDGGDTEMPIRPRAPASDAATEHEWLSLSDEEVVQRAVLSRQIPYAQ
AFLRRHGSVGCSLEDIRKTGLRCVFTCLTHRDLQRAETLLTNMGFNVKERLHSICVYTAD
RDLRAFMVKELQRQSYLSAVEVQQVEFIKTIETLCSTPATRCPDPLDPNRVLQMTRSDPE
SRRVLEKIVKEPEASSSSSRSLLDSVRLDWVRYWDTDTQSFVLLSRLQDSTVGSCDPVAL
WSYLTSLHDLGRVTSWVCSMTTADTETTAAPCWPLLTPHTINNYSRCGEYLRNQILDLLA
RQGLFVQSEMDDFEQLLWRLAQAGGVMQDGSGPPVPQYLSSQGQEFHQRFILHCLENSLQ
YLLYTYLQHYRLTPGNWPGLTDRNLLESFPWFEMMLKLQRITRDLKDPERVFRASLTGAQ
VLLPGSQASISSMLLEGHSLLALSTIMFRPGGIDQALREGETGQDPLSRVDPQLLRMALS
AYPKLKTALFPQISPRGVSVCDISLYQLMQSLQPLDSSRLFSWQAGNAVGSTETSGEPPH
FSSSHLVNRFAIIENLDYLYYLSRGRPAFAYGVFLTQHLINCSNAKLQLSQAVEQVFSLS
LLNFNTSSVTAACVCFCELLGVCSLKLRVDLKVLNLILKLWRQDCEDGDRASVKQTLVEK
AGKLISHEKQTAQELLVHLEAAVRDALEKKAISRSSYEAAHEWALPVRFCHLHALPLSSV
YLQDCACDGQWINFLLFVQLHNYPPEQVISLAAGFSPALQAHISLAFQDLQPMSSHQIRD
ENPEPSREVFQVLLSSQEKPNPWRYLLCEAVRQHAPVLSVLAACHQGADLLQCLCVWILT
SVEDEISEEAAAHINENPSHHAWNLHDLSILWKTLLNKNRVRPLIRGFQLFQRESPLINM
LSMYELCYDYKDYQKAKDKLLHFQKCLLNLRSSSVVLSCDVLPVQWVESQASVLLLVLLK
QCRTQYELRRLLQLLVDMERLLKSNGPDFKKLSQLSQVLSDTPVLLSPCLLEDYSTSGLQ
GECRKMLEQLQDMGLFTQARKVAQLAELPIDCLIITELLRDLSALKAKRQWDRQETRLVF
WRKCHQQLKVDHVDPEAACQFFLSQAEEPLQSDSEAIQLQERCLLLGLAGHWLSCRESPL
PVLRLAQLEKRQWEYRIQWLVLRTALEQESLFAPSALSEDSFENLLKEFSFSKMAALNDQ
MHLSVEGLPVTEEDCVLSERDRKALSALIGQLLNEGSVNEASRVCRYFGLYHRDVWLVLR
CRGLACGELQPGPQELHSPEGESKRSLPLSPSMSSLSSFVVVSSPEDPVLVQLKQLVDKC
CHGKSYCKQVLSLYELSKELQCPYAEISSLEPEAVLCKVLLSQQTDRCKRAQTFISVQGL
QPEAVARLISSAVVEGLLGSSQEGETGDHLMYGPVDSREEFIQLAKLCGDPNLVGIRLLE
IISTVPLSELSCIVEILILAHDCFSLTCNMEGIVRVLQAARHLSHTHLAHGEGYGLLVRL
LTGIGRYNDMTYIFDLLHQNHRFEMLLRKKVESNVRLKTALLDYIKRCLPGDSEKHNMVA
LCFSMCREIGENHEAAARTQLKIIESQPWAITGDLKNALVKVMTLLKDAAESYSKDSCVR
QAVKCVKLAKLVTLQLYFMNHGQEQRVINLRPAELHSTIVALPRCYQAFVLAEAYDYSPD
WAEVLFHKIILNGEFSYLEEFKRHRSLPTSLFEEISKKMLHHNPPASSSQNLKKLLCHCE
DVYVHYKLAYEHKFLDVANMLLQDSKTNSFLNDRLGT
NT seq
7134 nt
NT seq
+upstream
nt +downstream
nt
atgttagaggtgttaaacagctcagatcaggcgctggaggtggatttactgctgtgtgat
catgatgtttgtgacagtgttgacatcagattggctaaaggttcatcgtttatgtgttgt
ttggatagtgaaggtaaattgagtttgataaacatctgtgacagcagctcatcagtacat
aaactgcacgaggcttcatacacagatttttgttgggaagatctgtcggaccacaacaga
cacaatgtcaacccaaatctgctggctgtggactctcagtgcaatctcagactttataag
gtggtctcacatggtcaagtggtcctggtgtctgaggtctcatcagattctctactggag
tctgtcaaagacaatcagtcagagatggcagagatgaggactgtgagactgctgtctttc
accgatggccgctgtttgttgctagtgaacacttgtgttgtgatccaggtcaggtggatt
caagagtcctcacatctggagtcattgtccagctgtcggctcagtttaacccctcagatc
caggacatgtgtgtcgactatcatctgtgtcgtgcgattctgtttgttctgctcagtact
ggcgtgacatatgtgtttgacagcaccgatggtaaactcctggctactgtggattttctg
tcgtactgcggtttaggacagacagacacagactcttctccacccgtaacctgctgtctt
ttccagatctcacatgacctcaacacagctgtagttgtcacctgccaaaaccaagcactc
gccattgacctgaacgactacttccggatgtatccagatcacctatgttgtcgtgcggcc
cctaatcgtccatttctgaggcccgtggaatcatgggatcatgacagcctttcaagctcc
gcccacagccttttagtactggatacacagctccaaacagacaggtcgtgggagtctcgt
ctgtcttcactgtatagcggctgtaaaaccctgaagcgtccgggtcacagttcaccctgg
tacagagatttcccacacgttgagtgtcatcgggcagcagccactgctaaactctcccgg
ccatccgtgaagcaagggggcgctgtgatgtgttttaatgttcctaaaagagctacagca
gcaatgctgaccgtgtccgagttctccgcggtggtaacatttgttgctcctgagaacagt
aacacatgtgtggcttactgggacctggagagtcaaaatgtcacatatcaccacacagat
acacctgctgtacctgtccagcggtcagcggaggaacacctgtgtctcttaatgaagagg
tcgggtctgtctgtggttctgttctgtgtgacccaggaggaactcttaaacagactgatg
gtttttggcacagccgggacggtcgactcgctgtgccatctaaacacctggggacgttgt
tcaattcccatacatgctctgcaggccggactaaagaaccaccagctggacacggttgat
ttcttcttgaagagtaaagagaacatcttgagtccagcatctgggtttgttctgcccgat
caaacgtcatcggtctccagccaaacccagctgaggaatattcatgctctgtgtccggct
ctggatttactacggtctgccattcaagacacacacacagaagcacagagtcgacagttc
tgtgagcagttactgagcatcacgctgaccttcctcaacacacagagcagagtcctcctc
accagcacacacgagctggatgtccacctgcaggagtgtgtgcagattttagatggctac
atctcagacctgagggcttacatgaagaaatatccgttttcagatgggggcgacactgag
atgcccatccgtcctcgagcccctgcatctgatgctgctactgaacacgagtggctgtct
ctgtctgatgaggaagttgttcagcgtgctgtattgagcagacagattccgtatgcgcag
gcttttctgcgcaggcatggctctgttggatgcagtcttgaggacatcaggaagaccgga
ttgcgatgcgtcttcacctgtctcactcacagagacctgcagcgggctgagacgctcctc
acaaacatgggctttaatgtaaaggagcgacttcacagtatctgtgtttacactgctgac
cgggatctaagggctttcatggttaaagagctccaaaggcagagttacctgtcagctgtg
gaggttcagcaggtggagtttattaaaaccattgagactttatgttcaacgcctgcgacg
agatgcccagaccctttggaccccaacagggttctgcagatgacccggtctgatccagag
agcagaagagtgctggagaagatcgtaaaggaaccagaagcctcctcctcctcctccagg
tctttactggattctgtgcgtctggactgggtcagatactgggacacagacacacagagt
tttgttcttctctccagactacaagactcaactgtgggttcgtgtgaccccgtcgcgctg
tggtcgtatctcacctctcttcacgatttgggccgtgtcacctcatgggtctgcagtatg
acaacagcagatacagagaccaccgctgccccctgctggcctctactgacaccacacacc
atcaacaactacagccggtgtggggaatacctgcgaaatcaaatcctggacctgcttgct
cgccaggggttgtttgtccaatcagagatggatgattttgagcagttgctatggcgattg
gctcaagctggaggagtgatgcaggatggaagcggcccacctgtcccacaatacctttct
tcacagggtcaagagtttcaccagcggtttattctgcactgtctggagaacagtctgcag
tatttgctctacacgtacctgcaacactacaggttaactcctgggaattggccgggtctg
actgacaggaacctgttggaaagttttccctggtttgaaatgatgctgaaattacagcga
atcaccagagatctcaaagacccagagcgagtgttcagagcgagtctgactggagctcag
gtcttgttgccgggcagtcaggcgagcattagcagtatgttactggagggtcacagtcta
ctcgccctatctacaatcatgttcagaccgggcggcattgatcaggcattgcgagaagga
gagacgggtcaggaccctttgagtcgagtggatcctcagctgttgagaatggctctgagt
gcgtatcccaaacttaaaacggcccttttccctcagatcagccctcgtggggtctccgtc
tgtgatatatctctctatcaactcatgcagtctttgcagccattggattcctccagactg
ttcagctggcaagcagggaacgcagtgggcagcaccgaaacgtctggcgagccgccccat
ttctccagctctcacctggtcaacagatttgctatcattgagaatctggactatctctat
tatctgagccgcggtcgcccggcgtttgcctatggggtttttctgacacaacatctcatc
aactgcagtaatgcaaagttacagttaagtcaagctgtggagcaggtcttctctttatct
ctgttaaacttcaacacttcatctgtgacggcggcttgcgtgtgtttctgtgagctgttg
ggcgtctgtagcctcaagctgagggtggatcttaaagtcctcaacctcatcctcaaactg
tggagacaggactgtgaggatggagacagggcttctgtcaaacaaacactcgtggaaaag
gccggtaaactgatctcccatgagaaacagacggctcaggagctgctggtccatctggag
gcggcagtcagagatgctctggagaagaaagccatcagtcggtcgtcatatgaggcggca
cacgaatgggctttacctgtgcggttctgtcaccttcacgctctgcctcttagctccgtc
tacctgcaggactgcgcatgtgacggacagtggattaacttcctgttgtttgtacagctg
cacaattatcctcctgaacaggtaatctctctggctgccggtttcagtccggctctgcag
gctcatatctctttggcatttcaagaccttcagccgatgagctctcatcagatcagagat
gagaacccagaaccttctcgagaagtgtttcaggttctgctcagcagccaagagaaaccc
aatccctggagatacctgctgtgtgaggccgtccgtcagcacgctcctgttctctctgta
ctggccgcctgccatcagggtgcagatctgcttcagtgtctctgtgtttggatactgacg
tctgtagaggatgagatctctgaggaggcagcagcacacatcaacgagaaccccagccat
cacgcctggaaccttcatgatctgtccatcttatggaagaccctcctcaacaagaacagg
gtcaggcctctgattcgtggctttcagctctttcagagggagtctccactgattaacatg
ttaagcatgtatgaactctgttatgactacaaagattatcagaaagccaaagacaaactt
ctgcacttccagaaatgtctgctcaatctgaggagcagcagtgttgtgttgagttgtgat
gttttgccggttcagtgggtggagtctcaagcgtcggttcttctgttggttctcctgaag
cagtgcagaactcaatatgaactccggcgtctcctgcagctgctggtggacatggagcgt
ctcctcaaatccaacggtccagactttaagaaactcagtcagttgagtcaggtgctgtcg
gacacacccgtgctgctctctccgtgtcttctggaagattattccacctccggcctgcag
ggggagtgcaggaagatgcttgaacagctgcaggatatggggctcttcacacaggcgagg
aaagttgcgcagttagctgagctgcccatcgattgcctgattataacggagctcctgcga
gatctgtctgctctgaaagccaagcgtcagtgggaccgacaggagactcgtctggtgttt
tggaggaagtgtcaccagcagctgaaggtggatcatgtggatccagaggcggcctgtcag
ttctttctgtctcaggctgaggagccgttacaatcggattcagaggcgattcagcttcag
gaacgctgtctcctgttgggtctggcgggtcattggttgtcctgccgtgagtctccgctg
cccgtcctgcgtctggcacagctggagaaacgacagtgggaatatcgaatccaatggctg
gtgcttcgtaccgctttggaacaagagagtttgtttgcaccctccgctctctctgaagat
tcgttcgagaacctcctgaaagagttttctttttccaaaatggccgccctgaatgaccag
atgcatttgagcgtagagggtctcccggtgaccgaagaagactgtgtgctatctgaacgt
gaccgtaaagcattgagtgctctcattggccagctgctgaacgaggggagcgtgaacgaa
gccagtcgcgtgtgtcggtactttggcttgtatcacagagatgtgtggctggttttgaga
tgtcgtggtttggcgtgtggagagcttcagcctggaccgcaggaacttcacagcccggaa
ggagagtcgaaacgcagtttaccattatcccccagtatgagcagtctgtcatcttttgtg
gtggtctcatctcctgaagatccagtcctggttcagctcaaacagctggtggataagtgc
tgtcatggcaagagttactgcaaacaagtcctcagcctctatgagctttcaaaggagctt
cagtgcccatacgcagagatctcatctctagaacccgaggcggttctgtgtaaggttctg
ctctcgcagcagactgatcgctgtaagagagctcagacgtttatcagcgttcagggtctg
cagcccgaggccgtcgctcggctcatttcttcagctgtggtcgagggtctgctcggttct
tctcaagaaggtgaaacaggagaccatctcatgtacggtccggtggacagcagagaggag
ttcattcagctggccaaactgtgtggagacccaaacctggtgggaatcagactgctggag
atcatctctacggttcctctgtcagagctcagctgcattgtggagatcttgattttagct
cacgattgcttcagtctgacctgtaacatggagggtattgtgagggtcctgcaggcggcc
agacacctcagtcacacacatctggctcatggtgaaggctatggactgctggtgcgtttg
ctcacgggtatcggccgctataatgacatgacttacatcttcgacctgctccatcagaac
catcgctttgagatgctactaagaaagaaagttgaatcgaatgtaagactgaagacggct
ctgttggattatatcaagcgttgtctgccgggtgacagcgagaagcacaatatggtggct
ctgtgtttcagcatgtgtcgggagatcggagaaaatcacgaggccgctgcacgaacacag
cttaagatcatcgaatctcagccgtgggcgatcactggggatctgaagaacgctttagtg
aaagttatgactttactgaaagatgcagctgagagttactcaaaggactcgtgtgtgcgt
caggctgttaaatgtgttaaactggctaaactggtcactcttcagttatattttatgaat
catggacaagagcagcgcgtcatcaatctacggccggctgaacttcacagtaccattgtg
gctttaccgcgctgttaccaggcgtttgtgttagctgaagcgtacgactacagtccagac
tgggccgaggtgctgtttcacaagattatactgaatggagaattcagctacctggaggag
tttaaacgccacagatcgctgcccaccagtctgtttgaggagatctccaaaaaaatgttg
catcacaatccgccagcgagttccagtcagaatctgaagaagctgttatgtcattgtgag
gacgtttacgtgcattataaactggcctatgagcacaagtttctggatgtggcaaacatg
ctgcttcaagactccaaaaccaacagctttctgaatgacagactgggcacataa
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integrated database retrieval system
