Paramisgurnus dabryanus (large-scale loach): 135768208
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Entry
135768208 CDS
T10799
Symbol
neo1b
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04350
TGF-beta signaling pathway
pdab04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
135768208 (neo1b)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
135768208 (neo1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pdab04515
]
135768208 (neo1b)
Cell adhesion molecules [BR:
pdab04515
]
Immunoglobulin superfamily
DCC/UNC5 family
135768208 (neo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
fn3_2
NDNF
Sp38
GH101_dom-5
SusE
EphA2_TM
FAM176
Motif
Other DBs
NCBI-GeneID:
135768208
NCBI-ProteinID:
XP_065133466
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All DBs
Position
23:2386467..2507546
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AA seq
1431 aa
AA seq
DB search
MAERGARLLVLFTGLTVFQFGGANKGVGIRGFTSFRFSVEPMDTLAVRGLPAILNCSAIS
DAPVRVEWKKDGTFLNLAADDRRRQLEDGSLLISTVVHSKHNKPDEGIYQCVATIDNLGT
ISSRTARLTVAGLPRFLSQPEGVSVHEGGTEMLNCEVTEELAPFIRWEKGGRAVELDSRV
IQLPSGALVISNASQSDAGLYRCTIEGLGPPKSSEEAELQVSADSGVEEKVETLQGPVAV
AKVVGESVLLPCVMKGYPVPVIRWTFNGRPVDEGSERFAVIGGGSLQIVNLTEEDAGIYS
CQADGNNMTSEIQAELAVRVPPRFLTRPSNTYAQESMDIIFECDVTGSPPPTVKWMKDGD
TVIPSDYFRIVKQHNLQVLGLVKSDEGFYQCLTENDAGNIQASAQLIILDLDVALPSALP
SLTDATTDHVASSLAERSGPTPSAPRDVVASLVSTRFIKLTWRLPAEPNGENITYSVFYG
LDGTNRERVENTSAPGEMQVTIQNLVPDTKYSFRVVASNSNGHGESSTLLTVATQPEVQL
PGPAPNLQVLSVGTTTITLSWERPVTGNGEIQTYKIFYSEKGQDSEQDTDVTGLSYTMTG
LKKFTEYSFRVVAFNKHGPGVSTEDVTVRTLSDVPSAPPQNLTLEVLNSTCIMVRWQPPP
LGTMNGELTGYKLRYRKGLKRADSVEITTTQLFQPIDGLEKGKIYTFRVLATNVNGSGPA
TEWIAAETFENDLDESQVPGVPSSLHVRPLVNRIVVSWTPPNTQEILVRGYKIGYGIGSP
HAHTVTLDYKQRFYSIDNLDPGSHYVITLKAFNNMGEGIPIYNSATTRPQSDPIDPDIDF
YELFNNPYTPAPDPSPMLPPVGVQASVLSQDTIKVSWADNSLSKNQKITDSRYYTIRWKT
NIPANTKYKMANTTSLFHTVTGLKPNTLYEFSVMVTKSRRSSTWSMTAHGTTLESIPSSA
PKDVTVVSKEGNPRIININWQPPTEANGKITGYIIYYSTDVNAEVHDWVVEPVVGNRLTH
QIQGLTLDTAYYFKIQARNSKGMGPMSDALQFRTPKAEPSDKMSNDQGLQVKPGHPNLPE
HGTGSNIDKPGITGSHENHILVIVVIVSVGVFTIIAVVVGAILCTRRSHSHQKKKRAACK
SSGGSHKYKSSSKDLKPPDLWIHHERLELKPMDKSPEPNPVMTETPIPRTAQDPPADPSH
QRRGHEVEESVSTVVGRRGVRPKIMMPFDSQPPQPVISAHPIHSLDHLHHHHHHYHLPPR
GYLHHQISLRAPATPNPYIDRYPSTESVPEPLVAPSQPTSTAEPQKAESVIKEEDPPSIN
PSTAHVRPTHPLKSFAVPTVTVSAHNPPTYETTLPSTPLLAQSVPGVKTASIGTLNRARA
PMAVTVPSAPDQSETSKMLTQADLTYETDELSEEMAHLEGLMKDLNAITTA
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggggcacggctgctcgtgttgttcacgggtctcaccgttttccagttc
ggcggtgcgaataaaggtgttggcattcggggcttcacgtcgttcaggttctccgtggaa
cccatggacacgttagctgttcgtggcctcccggccattctgaactgctcagccatcagc
gacgctccggtcagggtggaatggaagaaggacggaacgttcctcaacctggcagcggat
gaccggagacggcagctggaggacggctctctgctcatcagtacggtggtccactccaaa
cacaacaaacccgatgagggcatttatcagtgcgtggccaccatcgacaatctgggtacc
atcagcagccgaacggcgagacttacggtggcaggacttccgcggttcctcagtcaaccg
gagggcgtgtctgttcatgaaggcgggaccgagatgctaaactgtgaggtgacggaagag
ctcgccccgtttatccgctgggagaaaggcggccgggccgtagagctggatagcagggtc
atacagttacccagtggagctctggtcatcagcaatgcctctcaaagtgatgccggactc
taccgatgcacaatcgagggtctaggaccgcctaaatccagcgaggaggcggagctacag
gtgtcagcagactctggtgttgaggaaaaagtggagactctccaaggcccggttgcagtg
gcaaaggttgtcggggagagcgtgttgttgccatgcgtcatgaagggttatcccgtgcca
gttattcgttggacgttcaacgggaggccggttgatgagggcagtgaacgcttcgctgtg
attggtgggggcagcctgcagatcgtcaacctgacagaggaggatgctgggatatatagc
tgccaggcagatggcaacaacatgaccagtgagatacaggcagagctcgctgtgcgggtt
cctccacggttcctgacgagaccttccaacacgtacgcccaggagtccatggacatcatc
tttgagtgtgatgtcacggggtcaccgccgcccactgtgaaatggatgaaggacggagac
acggtcataccgagcgattatttcagaatagtgaagcagcacaacctacaggttttgggt
ttagtgaaatcggacgagggtttttatcagtgtttaacggagaacgacgctggaaacatt
caggccagcgcacagctaataatactggatttagacgttgcccttccttctgctctgcct
tcactgactgatgccactactgaccatgtagcgtccagcctcgccgagcgttccggtccc
accccgtccgcaccgcgagatgtcgtggcgtctttggtgtccacccgattcatcaagctg
acgtggcgacttcctgccgagccaaatggggagaacatcacttactcggtcttctacggt
ctggacggcaccaacagggagcgtgtggagaacaccagcgcgccaggagaaatgcaggtc
accattcagaacctcgttcccgacaccaagtactcctttcgggtggtcgcatccaactcc
aatggccatggcgagagctccaccctgcttacagtggccacccagccggaggttcagcta
cccggaccggctccgaatctgcaggtgctgtctgttggaaccacaacgatcacactgagc
tgggagagaccggtcacaggaaacggcgagatccagacctataaaatcttctacagcgag
aaaggccaagactctgaacaggacacagatgtgacgggtctgtcttacactatgacagga
ctcaagaagttcacggagtacagtttcagagtggtggcgtttaacaagcacggtcctgga
gtttctacagaagacgttacagtccgaaccttgtctgacgtaccgagtgccccgccgcag
aatctcacactggaggtcttgaactcaacgtgcatcatggtccgatggcagccgcctcca
cttggcactatgaatggagaactgacggggtataaattacgctatcgtaaaggtctgaag
cgggcagattcggtggagatcaccaccacacaactctttcagccaattgacggtttggag
aaagggaagatttacacattcagagttttggccactaatgtaaacgggtctgggccggcg
acagagtggatcgcagccgaaaccttcgagaatgacctggacgaatcacaggtgccaggt
gtcccgagttcgttacacgttcgtccgctggtgaacagaatcgtggtgagttggactccg
ccaaatacccaggagattttagttcgaggttataagatcggctatggtatcggaagccct
catgcccacacggtcactctggactacaagcagcgtttctacagtatcgataaccttgat
cccggttcacattacgtcatcacgctaaaggcgttcaacaacatgggtgaagggattccc
atctacaacagtgccacgaccaggccacagtctgaccccattgaccctgacattgatttt
tatgaactcttcaataacccatacaccccagctcccgacccttcacccatgctgcccccg
gtgggcgttcaggcctccgtcctcagccaggacaccatcaaagtcagctgggccgacaac
tcgctctcgaagaaccagaagatcacagattccagatattacaccatcagatggaagact
aacatcccagcaaacactaaatataagatggcaaacacaacgtctctgtttcacacggtc
actggtcttaaacccaacacattgtatgagttctctgtcatggtgaccaagagccgcagg
agcagcacatggagcatgacggctcatgggacgacacttgagtccattcccagctcagca
cctaaagatgtgaccgtggtgagtaaagaaggaaacccacgaatcatcaacatcaactgg
cagccgcccactgaggccaatggcaaaatcacagggtacatcatctactacagcactgat
gtaaatgcagaggttcatgattgggttgtggagcctgtggtgggaaaccggctgacccat
cagattcagggtctgacgctggacaccgcttactactttaagattcaggcgaggaactct
aaaggcatgggtcccatgtctgacgccttacagtttcgcactcctaaagctgaaccctct
gacaagatgtcaaacgatcaagggctgcaggtcaaacccggacaccccaacctgcctgag
cacgggaccggatccaacatcgataagccgggcatcacaggcagtcatgagaatcatatt
ctagtgatcgtggtgattgtttcagtaggagttttcaccatcatcgctgtggtcgtggga
gccatcttgtgcacgcgccgatcacactcacatcagaaaaagaaacgtgcggcctgtaaa
tccagcggcggatcacacaagtacaagagttcctctaaagatctaaagcctcctgatctc
tggatccatcacgagcgtctggagcttaaacccatggacaaatcacctgagcccaaccca
gtgatgaccgagacgcccatccctcgtactgctcaggacccgcccgctgatccttcacac
cagagacgaggtcatgaggtagaggagagtgtgtccactgtggtcggccggaggggagtg
agacccaaaataatgatgccatttgactctcagccaccccagcctgttattagcgctcac
cccattcattccctcgaccatcttcatcatcatcatcatcactatcatcttccaccacgt
gggtatcttcatcaccagatcagtctgagagctcctgccaccccgaacccttacatagac
agatatccctctacagaatctgtaccggaacctctggttgcccccagtcagcccaccagc
acagctgaaccccaaaaggcagagtctgtgatcaaagaggaagacccacccagcatcaac
ccatcgacggctcacgttcggccgacacacccgctcaagagcttcgccgtaccgacagtg
accgtctctgctcacaacccccccacatatgagacgaccctgcccagcacccctctactg
gcccaatcggttcctggtgttaaaactgcatctatcgggacactgaatcgagcacgtgca
ccaatggcagtaacggtacccagtgctcctgaccaatcagaaacaagcaagatgttgaca
caggccgatttgacgtatgagacggatgagctgtcagaagaaatggctcacctggagggt
ttgatgaaggatctgaacgccatcaccacagcctga
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