Paramisgurnus dabryanus (large-scale loach): 135768239
Help
Entry
135768239 CDS
T10799
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03013
Nucleocytoplasmic transport
pdab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135768239 (thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
135768239 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135768239 (thoc5)
03041 Spliceosome [BR:
pdab03041
]
135768239 (thoc5)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
135768239 (thoc5)
Spliceosome [BR:
pdab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
135768239 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
135768239
NCBI-ProteinID:
XP_065133526
LinkDB
All DBs
Position
23:3123046..3136129
Genome browser
AA seq
724 aa
AA seq
DB search
MSSDAVKKRKPKVIRNEGGTPETKRSREGDQLSAVSKHVRLRKVSLREVQVTCSAGLLPI
GQRKLSAGKNQDVRVYNEEVELEGRDAQQDYILYKDTCAALAKLMAEIQELKASGAKDGS
VEIEERRRQSSVHFITLKKLNRLAHMRLKKGRDQTHETKQRVDVLHLQLQNLLYEVMHLQ
KEIGKCLEFKSQHEEIELVSEQEFFQEAPEEISRPHITRDDQHQLTLARLDWELEQRKRL
AEQYKTSLTSKEKIQKAIEQKKEYLSSLQPGLQNIMQASIPVQEYLSMPYERMQKQAEVA
RHLPPPLYVLLVQASAYGQACDKNLSVNISGDVDEAKALSRRPEESQDDESDSDAEEEQQ
NTKRRRGTVGVQMEDKRKEMLRRHPLSLCVDLKCKDNSVLHLYFYYLMNLNILTVKIKVS
TSVDLSGAISSGELMNSDSLLNCLYASDHGRETPNPANRYQFDKVGINTFEDYVSELGHP
YVWVQKLGGLQFSQAEMTGNALSASHMEKTMKLLKGRLQARLALHKQFSSLEHSIIPVSS
ECQHLFPAKVVSGLTRWTMMSYQEFTELSYVQHLLKVGLVSETDLFFMAVVERGTGENCA
PRLMAAVVLNPRYPEVAPLFSLTLHWKGERSGRTDDNLRAIESEVNIFRGELQGPRPGFQ
LLTNQIQRLCVCLDVYLETENQVCDGSEGPKEFPREKMCLRTARGPSRLKPFKYNHPQGF
FSHR
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagacgcagtgaagaagagaaaacctaaggtgatccgaaacgaaggtggcact
ccagaaaccaaacggagtcgagagggagatcagctcagtgcagtcagtaaacatgtcaga
ttgaggaaggtcagtttaagggaggttcaggtcacgtgttctgcaggacttcttcctatt
ggacagaggaagctgtctgcaggaaagaatcaggatgtgcgtgtgtataatgaggaagtg
gagctggaaggccgagatgcacagcaggattatatcctgtataaagacacgtgtgccgct
ctggctaaactgatggcagaaatccaggagctgaaagccagcggcgctaaagacgggagt
gtggagatcgaggagagacgcagacaaagcagtgttcattttattactctaaagaaactt
aaccgtctggcgcacatgagactgaagaaaggccgagatcagacgcatgagacgaagcag
cgtgttgatgttcttcacctgcagcttcagaatcttctctatgaggtcatgcacctgcaa
aaagagatcggcaaatgtctcgaattcaagtctcagcatgaggagatcgagctggtcagc
gagcaggagttcttccaggaggctccagaggagatctcacgacctcacatcactcgagat
gaccaacaccagctcacccttgcccggctggactgggaattggagcagaggaagaggttg
gcggagcagtataagacgtctctgaccagtaaggagaagatccagaaagccatcgagcag
aagaaagaatatctgagcagccttcagcctggactgcagaacatcatgcaggcatctata
ccggtgcaggagtatctctcgatgccgtacgagcgcatgcagaaacaggccgaggtggcg
cgtcacctgccccctccgctttacgtgttgttggtgcaggcgagcgcttacggacaggct
tgcgacaaaaatctgtccgtgaacatcagtggagacgtggacgaggccaaagctctctcc
agacgcccagaagaatcacaagatgatgaaagtgattcagatgctgaagaggagcagcag
aacacaaagcgtcgcagaggaacagttggcgttcagatggaggacaagcgtaaagagatg
ttaagacgtcaccctctttcgctttgtgtggaccttaagtgtaaagacaacagtgttttg
catctgtacttttattacctcatgaacctcaacatactcactgtgaagatcaaagtttcc
acctctgtggatttgtcaggagccatcagctcgggggagctgatgaactcggacagtttg
ctgaactgtctttatgcgtccgatcacggccgggagacgcccaaccctgccaaccgttac
cagtttgataaagtcggaatcaatacgtttgaggattacgtctcagaattgggacatccg
tacgtttgggtgcagaaactgggcggcctgcagttctcacaggctgagatgacgggtaac
gctcttagtgccagtcacatggagaaaaccatgaaactgctcaaaggacgtctgcaggcc
agactggctctacataaacagttcagctcactcgagcacagcattattccagtctccagc
gaatgccagcatctctttcctgccaaagtggtttccggcctcacacgctggaccatgatg
agctaccaggaattcactgagttgagctacgtgcagcacctgctgaaggtcggtctggta
agcgagactgatctgttcttcatggctgtggtggagagaggcacgggtgagaactgtgct
cctcgtctgatggccgctgtggtattgaaccctcgatatcccgaagtcgcacccctcttc
tcgctcacactacactggaaaggagaacgaagcggccgcacggacgataacctgcgggcg
atagagagcgaggtaaacatcttccggggtgagctgcaggggccacgcccaggcttccag
cttctgaccaatcagatccagcgtctgtgtgtgtgtctggatgtgtacctggagacggag
aaccaagtgtgtgatggttcggagggacctaaagaattccccagagagaagatgtgcttg
cgtactgccaggggtcccagtcgcctgaagccctttaagtacaatcatccccagggcttc
ttcagtcatcgctga
DBGET
integrated database retrieval system
