Paramisgurnus dabryanus (large-scale loach): 135768269
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Entry
135768269 CDS
T10799
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
135768269 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135768269 (myo5c)
04131 Membrane trafficking [BR:
pdab04131
]
135768269 (myo5c)
03029 Mitochondrial biogenesis [BR:
pdab03029
]
135768269 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pdab04812
]
135768269 (myo5c)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
135768269 (myo5c)
mRNA cycle factors
P-body specific factors
135768269 (myo5c)
Membrane trafficking [BR:
pdab04131
]
Others
Actin-binding proteins
Myosins
135768269 (myo5c)
Mitochondrial biogenesis [BR:
pdab03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
135768269 (myo5c)
Cytoskeleton proteins [BR:
pdab04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
135768269 (myo5c)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
ATG16
nSTAND3
AAA_16
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
135768269
NCBI-ProteinID:
XP_065133579
LinkDB
All DBs
Position
23:complement(3698357..3725711)
Genome browser
AA seq
1750 aa
AA seq
DB search
MALSELYTKFNRVWIPDTEHVWKSAEILKDFQPGDKELEIQLEDGTELQYPLEGGEKLPP
LRNPDILVGENDLTALSYLHEPAVLHNLKIRFVESKIIYTYCGIILVAVNPYKQLPIYGD
AVIHAYSGQNMGDLDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFA
MVSKSSSNTRVEDRVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRKYQIIGANMRT
YLLEKSRVVFQSENERNYHIFYQMCACANQPEFKSLKLLSADEFNYTCMGGEMEIEGVDD
RVDMAETRRTFNLLGLNENFQMDVFKVLAGILHLGNTVIKAQNTEKSTINSSDPHLEVFC
DLMGVNMDDMCRWLCHRRIVLSAETVVKPQPKERAVNARDALAKHIYALLFDWVIHKINK
ALKVPGKQHSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKED
IPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDKNWLQKLYNFLGSKALFEKPR
MSTDSFLIQHFADKVEYQCKGFLEKNRDTLYEELVSLMRSSQFALVAEFFQEEEEPNSGR
KNIKVTPAQPRAKGVNKQLRSTVGEKFRSSLYLLMETLNATTPHYVRCIKPNEEKLPFEY
DSKRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSQSELKSEEKKQTCRMVL
QRLIPDSNQYKFGRTKIFFRAGQVAYLEKLRLDHLRAACVTIQKHARGWRQRRRFLHMRE
AAITIQQYIRGKKKIRQTVTALALKQGWAALVIQRHCRGYLVRRVYQLVRIATITIQAFT
RGWRARKHYKKMVAEHKALVLQKYARAWLVRRRFQTMRRLVINVQLSYRVQQLRKKVEEQ
NKENRSLMERVTSLSNARAQGMEKVQALEAELNKLTNERTALEEKERKNTEEAKQAVALL
QNEKKKLIQANKALEQSLKDTTQQMRDNFENMKTKLMEDLEREERLRKVAEHNSELQKED
SEKEIEALQEENRRLREERVRLQAQLQEDQRINAEMQKQLQQLTKHVKVIPDLRKEINSL
QMQRDEADKTVKAQSQQARAKISVITRQLLGEAKEEELIRRLHEEVSNNNDEVDLLSAFD
EMEKAANFSLRVMENQLREQKDAYESRVETLVYKNEHLNKENKQLQAFFQEKSDINNSIA
QEVTRLTSENMVIPELKQQVSELTRNKHELETQLQDQNIEMTEKINKLSIDLQLAFEKEG
LQRRNLEKRILEMERSRDEMERQMVDLREENQQLQKVQQSESEAKNKLRQETTHLTAENM
DFEEQLDMKDRLIKRLQDQIKALQTTETANQRAPPAVPKEYLGMLEYKKEDEGRLIQTLI
LGLRPRSVGVCLIPGLAAHLLFMCVRHADYLNDENKLKSLMHNVIFSIKEVVMENQENFE
VLSFWLSNTHRFLNCLKQYSGEEEFKKQNTPRQNKNCLKNFDLSQHRQILSDLAINIYHQ
FINLMEDGLYPMIIPGMLEHESLQGISSMKPTGFRKRSSSVYEEGEDHTRGQSYTMTSIL
QQLSVFHACMEKQVMEPQLQGQVIRQLFYLIGSTSVNSILLRKDLCSCRKGMQIRCNISY
LEEWLREKGLPAACTMEMLGPLSQVAWLLQVNKTTDEDAAEIKQRCSELSPVQIVKILNS
YTPIDDFEKRVTPSFVRKVQALLHERDGSSQLMMDAQYRFQVTFPFCFSPQALELLQVPS
SLHLDFVTRI
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtcggagttgtacacaaagtttaacagggtatggatccctgacactgaacat
gtgtggaagtctgcggaaattctcaaagatttccaacctggagacaaagaactggaaata
cagctggaggatgggacggagttgcagtatcctttggaagggggtgagaagttgccaccc
ctccgtaacccagacattttggttggggagaatgacctcacggctctcagctatctccac
gaaccggccgtgctacacaacctcaaaatccgatttgtcgagtccaaaatcatctataca
tattgtggaattattctggtggcagtcaatccatacaaacagctccccatctatggagat
gcagtcatccatgcatactcaggccaaaatatgggcgacctggaccctcatatatttgca
gtggcagaggaggcttataaacaaatggccaggaataataagaatcagtccatcattgtg
agtggcgagtcaggggctggaaagaccgtatctgctcggtatgcaatgcgatattttgcg
atggtgagcaaatctagcagcaatactcgagtggaggacagagttttggcatccaacccg
attactgaggccattggtaatgcaaaaaccaccagaaatgataacagcagccggtttgga
aaatacacagagatcagcttcgacagaaaataccaaatcattggtgctaatatgaggaca
tatctgctggaaaagtcaagagtcgtgtttcagtcagagaacgagaggaattatcacatc
ttctatcaaatgtgtgcctgcgcaaatcaaccagagtttaaaagcttgaaactattgagt
gcagacgagtttaactacacttgcatgggtggtgagatggagattgagggtgtggacgac
cgagtcgacatggcagaaacacgcagaaccttcaacttgttgggtcttaatgagaatttt
cagatggatgtctttaaggttcttgctggaattctgcatttaggaaacacggtcatcaaa
gctcaaaacacggaaaaatcaaccatcaattcaagtgaccctcacctggaggtgttctgt
gacctgatgggcgtcaacatggatgacatgtgtcgctggttatgtcatcggcgtatcgtc
ctatcggcagagactgtggttaaaccacaacccaaggagcgggccgtcaatgcacgtgat
gccctggcgaaacacatctacgctctccttttcgactgggtcatccacaaaatcaacaag
gcactgaaggtccctgggaaacaacattcatttattggggtgttggatatttatggattt
gagacatttgacgttaacagtttcgagcagttctgcatcaactacgccaatgagaagcta
caacagcagtttaacttgcatgtgtttaaactggagcaggaggaatacatgaaagaggac
attccctggacgcttatcgatttctatgacaaccagcctgtcattgatctcatcgaggct
aagatgggaattctggaccttctggatgaggagtgtttgttccctcaaggaaccgataag
aattggctgcaaaaattatataattttctaggctcaaaagcgctcttcgagaaaccacgt
atgtctactgactcttttttgatccagcattttgcagacaaggttgaatatcagtgtaaa
ggttttttggagaagaacagagacactctttatgaagagctggtcagcctcatgcgctct
agtcagtttgctctcgtagctgaattctttcaagaggaagaagaaccaaactctggccgc
aaaaacataaaagtaacaccggcacaacccagagccaaaggtgtaaacaaacagctgagg
tccacagtaggagaaaagtttcgaagttccttgtacctcttaatggagacgctgaacgca
accacaccccattatgtgcgctgcataaaaccaaatgaagagaaactcccatttgagtat
gattcgaagcgtgtggtacaacagctgagggcctgtggagttttggagaccattcgcatc
agcgcccaaagttacccatcgaggtggacatacatcgagttttacagccgttacagtatt
ttgatgagtcagtcggagctgaagtcagaagagaaaaaacagacgtgcaggatggtccta
cagagactcattcctgattcaaaccagtacaagtttggtcggaccaagatcttcttccgg
gcgggacaggtggcgtatctggagaagctgcgtttggatcatcttcgtgcggcatgcgtg
accatccaaaagcacgcgaggggctggaggcaaagacgacggttcctgcacatgagagaa
gcagccattaccatccaacagtacatcaggggcaagaagaagatcaggcaaaccgtgacg
gctttagcactgaagcagggctgggccgctttggtaattcagaggcactgtcgcgggtat
ctggtaaggagggtttaccagcttgtccggatcgctacaatcaccatacaggcctttacc
agaggatggagggctcgcaagcattacaaaaagatggtggcagaacacaaggctttggtt
ctgcagaaatacgctcgggcctggctggtccgccggaggtttcagaccatgcgcaggctg
gtgatcaacgttcagctttcgtatagagtccaacagcttcgcaagaaagttgaagaacag
aataaagagaatcggagcctcatggaaagagtcacaagtttgtctaatgcacgtgctcag
ggaatggaaaaggttcaagctttggaggcggagctaaacaaactaaccaatgagaggacg
gctttagaggaaaaggagaggaaaaacacagaagaggccaaacaggcagtcgctctgctt
cagaatgaaaaaaagaaacttatccaggcgaataaagctttggagcagagcctaaaggac
acaacccagcagatgagagataactttgagaacatgaaaacaaaactgatggaagatttg
gagagggaagagagacttagaaaggtggcagagcacaacagtgaactccagaaagaagat
tcagagaaagagattgaggctcttcaggaggagaaccgcagactgagagaggaaagagtc
cgactacaggcgcagctgcaagaagatcaacgcatcaatgcagaaatgcagaaacaacta
cagcagctcacaaaacacgtcaaggtcataccagatttacggaaggaaattaacagcctg
cagatgcagagagatgaagctgacaaaaccgtgaaagctcaaagtcaacaagcccgagct
aagataagtgtgattacgaggcagctgctgggtgaagctaaagaggaagagctcattcgc
aggctgcatgaggaagtctcaaataataacgatgaagttgatcttctctctgctttcgat
gaaatggagaaagctgctaatttttctctcagagtgatggagaaccagctgcgggagcag
aaggacgcttacgagagtcgagtggaaacgctggtgtataaaaacgaacatttaaacaaa
gaaaacaaacaacttcaagctttctttcaggagaagagcgacattaacaacagcatcgca
caagaagtgacccgtcttacttcagagaacatggtgattcctgaactaaagcagcaggtg
tcagaactgacccgtaacaaacacgagctggagactcagttacaagatcagaatattgag
atgaccgagaaaataaacaagttatcaatagatcttcagctggcgtttgaaaaggaggga
ttacagagacggaacttggagaagaggattctggagatggagagaagtagagatgagatg
gaaaggcagatggttgatcttcgggaggagaatcagcagctacagaaagttcagcagtca
gagagcgaagccaagaacaaactcaggcaggagacaacacatctcacagctgaaaacatg
gactttgaggagcaactagacatgaaggacaggctgataaagagactgcaagaccaaatc
aaagctcttcagacaactgagacagccaatcagagagcaccgccagcagtgcccaaggaa
tacctgggaatgttggaatacaagaaagaagacgaaggcaggctgatccagacgctcata
ctgggtctgagaccacgtagtgttggcgtgtgtttgatccctggtctggctgctcatctt
ctcttcatgtgtgtgagacacgctgactatctgaacgacgaaaacaaactcaaatctctc
atgcacaacgtcatcttctcgatcaaagaggttgttatggagaatcaagagaattttgaa
gttttgtccttctggctgtctaacacgcatcgcttcctcaactgcctcaaacagtacagt
ggagaagaggagtttaagaagcaaaacaccccccgtcagaataaaaactgcctgaagaac
tttgacctttcacagcacagacagatccttagtgacctcgccatcaacatttaccatcag
ttcatcaatttaatggaggatgggctttatcccatgattatccctgggatgttggagcac
gagagtcttcaaggcatctccagcatgaagcccaccggcttccgcaagcgctccagcagc
gtgtacgaggaaggggaggaccacacccgtggccagtcctacaccatgacgtctattctc
cagcagctgtccgtgtttcacgcgtgcatggagaagcaggtcatggagccgcagctgcag
ggtcaggtgatcagacagctcttctacctgatcggatccacatcagtcaacagcatcctg
cttaggaaagacctgtgctcctgccgcaagggcatgcagatcaggtgtaacatcagttac
ctggaggagtggctgcgagagaagggtctgccggccgcctgcaccatggaaatgttgggg
ccgctgtctcaggtggcttggcttcttcaggttaacaaaaccacagatgaagatgctgct
gagattaaacagagatgctctgagctctcacctgtgcagattgtaaaaatcctgaactcg
tacacacctattgatgatttcgaaaagcgagtcactccatcttttgtccgcaaggtgcag
gcattactgcacgagcgtgatgggtcgtcccagctgatgatggacgcacagtatcgtttc
caggtcacgtttcccttctgcttctccccacaagccctggaactccttcaggtgcccagc
agcctccatttggactttgtcactcgcatatga
DBGET
integrated database retrieval system
