Paramisgurnus dabryanus (large-scale loach): 135768534
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Entry
135768534 CDS
T10799
Symbol
hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
135768534 (hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdab03036
]
135768534 (hdac5)
Enzymes [BR:
pdab01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
135768534 (hdac5)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
135768534 (hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
135768534
NCBI-ProteinID:
XP_065133845
LinkDB
All DBs
Position
3:complement(20586858..20661538)
Genome browser
AA seq
1126 aa
AA seq
DB search
MLLKPTVPGLCAMLQTIYETESCFSSDTTSSREQPVELLPQSRSTSMPSTAVDVKTLLPS
GMQSPVGGGGGDQSGGSGGPVDLRTDPRLNALSTVDPTLREKQLQHELLLLKQQQELQKQ
LLFAEFQKQHEVLTRQHEVQLQEHLKQQQEILAAKRQQELEQKRKLEQQRHEEMEKQRLE
QQLIMLRNKEKGKESAIASTEVKLKLQEFLLNKKEPGPGGLNHSFSQKCWPHHTSLEQSS
PPQSNTPGTPPSYKLPPLLGTYEGKDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRR
KDGTVISTFKKRAIEISVSSMCSSAPGSGPSSPNSSNSAIAENGSSGSVPNIHAEQLRSL
HQSLTGDGTPSPLSLYTSPSLPNISLGLPANAHITAPQKLSAQQEAERQTIQSLRQGGTL
TGKFISTSSLPACLPTGAAHDTEPPNSHSSHSSLLQHVLLLEQARQQSALLAVPIYGQSP
LVTGERVSNSMRTVNKLPRHRPLSRTQSAPLPQTPQALQQLVMQQQHQHFLEKQKHYQLN
KIFSKGAELPRQPPTHPEETEEELTETTEMQEERGEGPNRIREGLQKDSSGETTPPSERI
ITLKGESTESDLEEDDDEDEAIELRECDEEGAPYGQYLDQHVQQLNVFQASLSITGMPHR
PLGRAQSSPVTSSLKGAPISEPPIKHLFTTGLVYDTFMLKHQCMCGNTNIHPEHAGRIQS
VWSRLQETGLLGRCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQ
KMYAVLPCGGIGVDSDTVWNEMHSSGAVRMAVGCVIELAFKVAAGELKNGFAVVRPPGHH
AEESTAMGFCFFNSVAITAKLLQQKLGVGKILIVDWDIHHGNGTQQAFYNDPNVLYISLH
RYDDGNFFPGSGAPEEVGVGPGVGFNVNIAWTGGVEPPMGDVEYLTAFRTVVMPIANEFS
PDVVLVSAGFDAVEGHQSPLGGYNVTAKCFGHLTKQLMKLAGGRVVLALEGGHDLTAICD
ASESCVAALLGDELDALPLTVLQQKPCPKATASLEKVIEIQSKHWTSLQRLAPTVGQSLL
EAQRREKDEADTLTAMASLTVDNDQIATTETSSRSADEPMEEEPVL
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgaagcccaccgtaccgggactgtgcgcaatgttgcagacgatctatgagact
gaatcctgcttctcttcagacactacgtccagccgagagcaacccgtcgagctgctacct
cagtccagaagcaccagcatgcctagtaccgctgtggatgtgaagactttgctaccctct
gggatgcagagcccagtgggaggtggtggaggggatcagagcggaggtagcggaggtccg
gtggacctgcgtacggaccctcgcctgaacgcactgagcacagtggatccgacactgaga
gaaaaacagcttcaacacgagcttctcttgctcaaacagcaacaggagctccagaaacaa
ctactgttcgccgagtttcaaaaacagcatgaggttttgacacgccaacacgaggtccag
ctacaggaacatctaaagcagcagcaggagatcctcgcagctaagcgtcaacaggagctg
gagcagaagaggaagttggagcagcagcgtcatgaagagatggagaagcaaagactggaa
cagcagctcatcatgctacgaaacaaagaaaagggcaaagagagtgccatagccagcact
gaggtcaaactaaaacttcaggagttcctgctgaataaaaaggaacccggtcccggtgga
ctcaaccattccttctcccagaagtgctggcctcaccatacatccctggagcagagctct
cctccacagagcaacacaccaggcacaccaccttcctacaaactccccccgctgttgggg
acctacgagggcaaggatgactttcctctccgcaagaccgcctctgagcccaatctgaag
gtacgttcccggttaaaacaaaaggtggcagagagaagaagtagcccattgctcaggcgg
aaagatggaactgtgatcagcaccttcaaaaaacgagccatcgagatctcagtgtcctct
atgtgcagcagtgctcctggctcagggcccagttctccaaacagctctaacagtgccatt
gctgaaaacggttcgagtggctctgtcccaaacatccacgctgagcagttacgttctctg
catcagtctttgactggagatgggacgccaagccctctgagcctctatacctctccatct
ctgcccaacatctctctgggacttcctgccaacgcacacatcacagctccacagaaactc
agtgcccagcaggaggcagagcgacagaccatccagagcttgcgtcaaggtgggacactg
accgggaagttcatcagcacatcatccctgccggcgtgccttcccacaggggcggcccac
gataccgagccccctaatagccacagtagccattcctcgctgctccagcatgtcttgctg
ttggagcaggcacgtcaacagagtgcgcttctcgcagttcccatatatggacagtctccg
ctggtaaccggcgagcgggtgtccaacagcatgcgcacagtgaataagctgcctaggcac
cggccgctaagccgcacgcagtcggcacctctgccgcaaactccgcaggccctgcagcag
cttgtaatgcaacaacaacaccagcacttcctagagaaacagaagcactaccagctaaat
aagatcttctccaaaggggcggagcttccaagacagcctcccacccacccggaagagacg
gaggaggagctcacggaaactacggagatgcaggaggagcgaggggagggccccaatcgt
attagagaggggctgcaaaaggacagctctggtgagaccacacccccttctgaacgcata
atcacgttaaagggagagagcacagaaagtgacttggaggaagacgatgacgaagacgaa
gcaattgaactgagggaatgcgacgaagagggcgccccttatggccagtatttggaccag
cacgtgcagcaactgaatgtgttccaggcatctttgtccatcacaggaatgccccacaga
cccctgggaagggcgcagtcatcccctgtcacgtctagtcttaaaggagcacccattagt
gagccgccaatcaaacatctctttacgacagggcttgtatacgacaccttcatgcttaag
catcagtgcatgtgcgggaacacaaacatccaccccgaacacgccggccgcattcagagc
gtttggtccaggctacaggaaacgggcctgctgggtcgctgtgagaggatcagaggaaga
aaggccacgttagacgaaatccaaacagtgcactctgagtaccacacgcttctctacggc
actagccccctgaacagacaaaaactggatagcaagaagcttttaggtccaataagtcag
aaaatgtacgctgttttgccctgtggaggcattggggtggatagtgacaccgtgtggaat
gagatgcattcatcaggtgccgtgcgaatggcagtgggctgcgtcatcgagctggctttt
aaagtagctgccggggaactaaagaatggttttgcagtggtccgtcctccaggtcaccat
gctgaagaatctactgccatgggtttctgttttttcaactccgtggccatcactgccaaa
ctccttcagcagaaactcggagtgggcaagatcttgatcgtggactgggatattcatcat
ggaaacggaacccagcaggcattttataatgacccaaatgtcctgtacatttccctgcac
cgttatgacgatggcaactttttcccaggaagcggcgctcctgaagaggtgggtgtgggc
ccaggagttggctttaatgtcaacatcgcctggacaggtggagtggagccacctatgggt
gatgtggagtatttaacagcattcaggactgttgtgatgccaatagctaatgagttctcc
ccagatgtggtgctggtgtctgcaggatttgatgctgtggagggccaccagtctcctttg
ggtggatacaacgtcaccgccaaatgtttcggccatctcactaagcagttgatgaagctg
gccggcggccgtgtggttttggcactggagggaggtcatgaccttactgccatctgtgac
gcatccgaatcctgtgttgctgcactgctgggagatgagttggatgctttaccactgaca
gtgcttcaacagaaaccgtgtccaaaagccacagcctctctggagaaagtcattgagata
caaagtaagcactggacatctctgcagaggttagctcctactgtgggccagtctctactg
gaggctcagaggagagaaaaggacgaggcggacactttgactgccatggcttctcttact
gtggacaatgatcagatcgccactacagaaacaagcagcaggtcagcagacgagccaatg
gaggaggagcctgtgttgtag
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