Paramisgurnus dabryanus (large-scale loach): 135768543
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Entry
135768543 CDS
T10799
Name
(RefSeq) protein CASC3-like isoform X1
KO
K14323
protein CASC3
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03013
Nucleocytoplasmic transport
pdab03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
135768543
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
135768543
NCBI-ProteinID:
XP_065133867
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Position
Unknown
AA seq
769 aa
AA seq
DB search
MADRRRRRRRASQDSEEEDESASGSEGGRPSSPGGKARGRDPEPVETPAERVVAKSDDES
ECESEDGVGEAVLSDYDSADLEENESHTEGGEEEEEGEHFGTEEASRPAAEPKPAVDAPV
EELEAEESDGGMKEGKADEKDNLAGERQSGDGQAETKLETGPKCLQESTEDPENKSDSKG
SQKLDDDEDRKNPAYIPRKGLFFEHDVRGQTQEEERPKGRHRKLWKDEGRWEHDKFHEDE
QAPKSREELISLYGYDIRNGTGPSEGRSYRSRKPRHGSPNREPRRQRDGERSVRTTWQGP
PPGHRNAPRSVPLQSGSSTAPPAASRTTGRTSTQPPLRSFHSNRAPSAPHRTEGRGYPKP
GLDGPPGRGVRTHPGEGERGPRLKGRGSYSTYADRSQDLLVEDIQSEEDEEGEIPLATTT
YTAHHYKTERDRVPSPRKQEPGAVAEGSSAAGQTRESSPPQERQVEKKSYSLARRATRTR
PSDLSKQASLDDSSSTVQQAATSAKGESWQEQTETGTQGGLTGLDQDLARLSLTGQNWAQ
SPPSYLQAEMRGIRGSMHMGGGPPQYGNMEEMGVGGGRAKRYSSQRQRPVPEPAPMHIGV
MEGHYYEPMSFQGPIYAHGDNPAALPPQGMLVQPEIHMPHPTHPGHPALHPHQSGGPMPN
PALYAAPPVSMSPGQPPPQQLLPPPFYPPPGVMTFGNTNYPYPAGATLPPMYPNPQAQSQ
VFGGVTYYDTVHQQAQPKRSPPRRSSHPVTVRPPPPEDQSRNPAEEIRS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcgacggagacggcgcgcctctcaggatagcgaggaggaggacgag
tctgcctcgggctccgagggcggcagaccctcatcgcccggcgggaaggctcgcggaaga
gatcccgagccggttgaaacgccagcggaacgcgtcgtggccaaaagcgacgatgagtcg
gagtgtgaaagtgaagatggcgtaggtgaagctgtgttatcagactatgacagcgccgat
ctggaggagaatgaatcgcataccgagggaggtgaggaagaggaggagggtgagcatttt
ggcacagaagaggcttcacggcctgctgcagaacccaaacctgctgtggacgcccctgtg
gaggagctggaggccgaagaaagcgatggagggatgaaggaaggtaaagcggacgagaag
gataatctagccggcgagaggcagagtggtgatggacaggccgaaactaagcttgagacc
ggccctaaatgtttacaggaaagcacagaggaccctgagaataaatcggacagtaaaggc
agccagaagctggacgatgatgaagacaggaagaatccagcatacatccctcgaaaaggg
ctcttttttgagcatgatgtcagaggtcagactcaagaagaagagaggcctaaaggcagg
cacaggaagttgtggaaggacgaaggtcgttgggaacacgacaagtttcatgaagatgag
caggcaccaaaatcccgcgaagagcttatttctctttacggttatgacatacgcaatggc
acgggaccaagtgaaggacgatcgtaccgttctcgaaaacccagacatggttcacccaat
cgagagcctaggcgccaacgtgacggcgaaaggtctgttcgtaccacgtggcagggcccc
cctcctggccatcgcaacgcccctcggtctgttcccctacagtcagggtcatccactgct
ccccccgcggcttccagaaccactggacgaacctcaactcagccccctctgcgtagtttc
cacagcaatcgagccccatcggccccgcacaggacagaaggtcgaggatacccgaaaccg
ggtctggacggcccgccgggtcggggtgtgcggactcatcctggggagggtgagaggggc
ccgaggcttaagggccggggcagttactccacctatgctgatcgtagccaggatctgctg
gtggaagacattcaaagtgaggaagatgaggagggtgaaattccactggcaacaactaca
tacaccgctcatcactacaagactgaaagagatagggtcccatcgccacggaaacaggag
ccaggagcggtggcggaaggaagcagtgcggcaggacaaacgcgagaatcgtctcctcct
caagagagacaagtggagaaaaaatcgtattcgcttgcacggagggcgacacgaactcgg
ccgtctgacctcagcaagcaggcgtccttggatgattcttcatcgacggtgcagcaagcg
gcaacatcggcgaagggcgagtcgtggcaggagcagaccgaaacaggaacgcaaggtgga
ctgacagggcttgaccaagacctggcccgtcttagcctgacgggacagaactgggcccag
agcccaccctcctacctacaggctgagatgaggggaatccgtggttcaatgcacatgggt
ggaggccctccacaatatggaaacatggaggaaatgggtgtcggtggtggccgggcaaag
cggtattcatcacagcgtcagaggccggttcccgaacctgcgcccatgcacataggagtc
atggagggtcattattatgaacccatgtctttccagggaccaatctacgcacatggggac
aacccagcagccctcccccctcaaggcatgcttgttcagcccgagatccacatgccgcac
cccactcaccctggacacccagccttacatccgcaccaatcaggaggacccatgcccaat
ccggctctttatgctgctccgcccgtatctatgtcacccgggcaaccgcctccacagcag
cttctacccccacccttctatccccctccaggtgtcatgaccttcgggaacaccaactac
ccatatcccgctggagcaacactacctccaatgtaccccaacccccaggcacagtcacag
gtctttggtggggtgacgtactatgacacggttcatcagcaagctcagcccaaacgctcc
ccaccccggcggtcttctcatcctgttactgtcagacctccacctcctgaggaccagagc
agaaatccagctgaggagattcgctcctag
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