| Entry |
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| Symbol |
tnrc6bb.1
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| Name |
(RefSeq) trinucleotide repeat-containing gene 6B protein
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| KO |
| K18412 | trinucleotide repeat-containing gene 6 protein |
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| Organism |
pdab Paramisgurnus dabryanus (large-scale loach)
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| Brite |
KEGG Orthology (KO) [BR:pdab00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pdab03019]
135769095 (tnrc6bb.1)
03036 Chromosome and associated proteins [BR:pdab03036]
135769095 (tnrc6bb.1)
Messenger RNA biogenesis [BR:pdab03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135769095 (tnrc6bb.1)
Chromosome and associated proteins [BR:pdab03036]
Eukaryotic type
Gene silencing
piRNA pathway
135769095 (tnrc6bb.1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
3:16581325..16598421
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| AA seq |
1580 aa
MEDRQSKTQDSGRHQEDTKDSIKESSSSVPSLTTLTCTSSRPDFTQTTSPCPVVGGSTNP
PEGGNNAKWTTVANGQPPSAVSQRYMPREVPPRFRNQQEPKVLLKRGQPPLSCMLLGGGQ
GGDVTPSTNASTSDPSDATVSLHSSSDASATPTYANYSWGLGPEGQSSAQGMDNIDSSDT
EKWPSLSKSGRLESSWSSDQRASSPICEYSQASAVVGASSRSENKESIKGADQSFNSKVP
SSAGDQEGSRGLNPNYSPPSWAGPVQDDPEGGLLTNTASEESPPTPLSPAGALSQTLSNN
KECIMGDWAEIKAGPNVVDSKDDGVNLDAWDTGEEQVKRGSDTAGDNRTVRDESSVSTTG
ISRGEMGVTNEQASTGWTSDSVGTSREDPSVFAASSVTSRDDNQKSVWDGLEKESARGES
SRDGMHIQSPLTSQTSNPEEALQTMINRTNLDPKVLCNTGWGKTQIKQSVAWNVENVVCN
VEEDTSRHKEGWKGTGDAPFSSSKMQKQEGMEVSHDQRWGAEGQKWDERTVVKRDGWGMH
GEVGTGHKGGGWGEAQDNDSTCRREGAEWDQGSRSEWRQTTPLPEAGGWKETRSSDSNNQ
GEGLWGSSEKEGHQSGGWGGVSVKQHQGWGEKHLPSQIPNKQTALKTQTQNQPQQQSQTQ
KQMPGHPKALQDRGQPGGPEGQSKGSGWTCGPIPEISSVVESSGWEEPSPQSISRNMEID
DGTSAWGDPSRYKNKNVNLWDKKSSQTQQQSCQSSVTQSSGRQTGAPPKNPVSATWGHGG
SGSPDQSVDNGAAAWGKSVDAPASWGESEEPGKAGVWGISHSRPTKSGSKSMQEGWADES
STASRHSSWEEEDGGTGVWGSRGSQSSMSTYNSGSWNQNHGGRRHSTRSPVKGNSGDSWA
TPMTRQFSNMGIMDEDSSMSQERHDKRGINDGEMRRGGRAGGAFRSQNSKEITPGDSGPY
LDKAGGHAMFGSGGIAQQRGVHQAGVHPLNRSPVMRAQVPQFLPPQVAGPMLKPMAPPSG
GMFPPQLSPQHIAMLGGVHPHMQQFQLACQLLLQQQQQQQQFLNQRKFPAPPRPQHDQQQ
LARIMAILQQQQGLGGGKLPSSPMGGPISKHPDTPPLHHQNKQPDASLHAAMGGSELHNK
PSTAFTGFAGASDLDSLIGSSGGLKDGGSVQSRFKWMMDGSSLTPSPPEPTLHNGPVKLG
GGSSYSQYDVLGGSWHRSSGVKVDTSPVNPTWPPEFQPGVPWKGVPSPEPDPYMTPAGLL
GSSVLTDTEHHLLQDNTGSNSLNTRLPSPGAWPYSTSDPTHTVHASAKYSELKSSWPPEP
IGHGKSWRTNRNSSHLPRPPPGLTSQKQAWSGEGPRMPRVWGGGANSHELPFKPEWSDGG
AGKSWLLLRNLTPQIDGSTLKTICLQHGPLLTFHLGLTQGSALIRYCSPHEAAKAQSALH
MCVLGNTTILAEFMSDDEVMRYFTHSQTTGVTGSPEGSSGSDPTSREGVGSDEGAAVRMA
SAGWQGLDVSGGSGPEGPGLALLSQWSNSTEEGAGKGFWGGVAPGYHSSNSSSLWGTSQL
EDGPAGLLPGNLLGGGTDSL |
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| NT seq |
4743 nt +upstreamnt +downstreamnt
atggaagaccgtcagagtaaaacacaagacagtggacggcatcaggaggatactaaagac
agtattaaagaatcaagttcatctgtcccgtctctcaccacccttacctgtacttcatca
cgtcctgattttacccaaacaacctccccctgtcctgtcgtcgggggttcaactaacccc
cctgagggagggaacaatgcaaagtggaccactgtggccaacggacagcccccctccgct
gtgtctcagcgctatatgccccgtgaggtgccaccacgcttccgaaaccagcaggaaccc
aaagtgctattgaagagaggccagccgccactgtcctgcatgctgctgggaggtggacag
ggaggggacgtcacgccctccactaatgcaagcacatctgatccctcagatgctactgtt
tctctgcactcatcatctgatgcctctgccactccaacttatgcaaattactcatggggt
cttggcccagaaggccaatcttccgctcagggaatggacaatatagacagttctgataca
gagaaatggccgagtctcagcaagagtggaagactggaaagttcttggagcagtgatcag
agagcgtcttctcccatttgtgaatattcacaagccagtgcagtggtgggtgcatcctca
cggtctgagaataaagaatctattaaaggagcggatcagtcattcaattccaaggtgcca
tcttctgctggagatcaagagggctctcgaggcctaaacccaaactacagccctccatcc
tgggctggtcctgtacaagatgaccctgaaggaggactcttaaccaacactgcctctgag
gaatctcctcccacacccttgagtccagctggtgcgctgtcccagacgctcagcaacaac
aaagagtgtattatgggtgattgggcggagattaaagctggaccaaatgttgttgatagc
aaagatgatggggtcaacttagatgcatgggatacaggtgaagagcaggtgaagaggggg
agtgatacagcaggagataatagaacagttcgggatgaaagttcagttagtaccactggc
atctctaggggagagatgggtgttacaaatgagcaggcatctacaggatggacctcagac
tctgttgggacatcaagagaggacccttctgtgtttgcagcaagttcagtgacatcaaga
gatgacaatcagaaaagcgtttgggatggcttagagaaagaatcagctcgaggggaaagt
agtagggatgggatgcacatccagagtcccttaacaagtcagacctccaaccctgaagag
gccttgcagaccatgatcaatcgcactaacctggaccctaaggtgctgtgcaacacagga
tggggcaagacccagatcaaacagagtgttgcctggaatgtagagaatgttgtctgtaat
gtagaggaagacactagccgccataaggagggctggaaaggtacaggtgatgcccctttt
tctagctccaaaatgcaaaagcaggagggaatggaggttagccatgatcaacgatgggga
gctgaagggcagaagtgggatgagaggacggtggtgaaaagggatggctggggcatgcat
ggagaagttggtactggtcacaaagggggtggatggggggaagcccaagacaatgacagt
acatgcaggagggaaggggcagagtgggaccaaggtagcagaagtgagtggagacagacg
acacctttacccgaggctggaggctggaaggagacaagaagtagtgactccaataatcag
ggtgaggggttatggggcagctctgaaaaggaggggcatcagagtggtggctggggaggt
gtcagcgtcaagcaacaccagggatggggtgagaagcatcttccatcacaaataccaaac
aaacaaacagcacttaaaacccaaacccaaaaccaaccgcagcagcaatcacaaacccag
aagcaaatgccgggacatccaaaggccttgcaggacaggggtcaaccaggaggaccagag
ggtcaaagtaaagggtctggatggacatgcggccccatccctgagatttcttcagttgta
gagtcgagtgggtgggaggaaccctcgcctcagtccattagccgaaatatggagattgat
gatggcacatctgcatggggcgacccatcacgttacaaaaacaagaatgtcaatctgtgg
gataagaaaagctcacagacccaacaacaaagttgtcagtcaagtgttacacagtcttct
ggaagacagactggagctccgcctaagaaccctgtttctgcaacatggggacatgggggc
agtggttcaccagatcagtctgtggacaatggggcagctgcatggggaaaatcagttgat
gccccagctagctggggggagtcagaggaaccagggaaagctggagtatggggaatctca
cattctcgtcctaccaagtctggttcaaagtctatgcaagaggggtgggctgacgaaagc
tcaactgcatcccgtcactctagctgggaggaggaagatggtggcactggcgtctggggc
agcagaggatctcaaagcagcatgtccacatacaactctggaagctggaatcagaaccat
gggggcaggcgacatagtactcggagcccagttaaaggtaacagtggggactcatgggca
actcctatgactcgacagttctcaaacatgggcataatggatgaagactccagcatgagt
caggaaagacatgacaagagaggaataaatgatggagaaatgcgccgaggtggcagggct
ggaggagcgttccgttcacagaattccaaagagatcacacctggggatagtgggccatac
ctggacaaggctggtggtcatgctatgtttggcagtggtgggatagctcagcagaggggg
gtgcatcaggctggtgtgcaccctttaaatcgttcccctgtgatgcgggcacaagtgcct
cagttcctccctcctcaggttgctgggccaatgctaaagccaatggcgcctcctagtggg
ggaatgttccctcctcagctctccccccagcacatcgctatgctaggaggtgttcatcct
cacatgcagcagttccaactggcttgtcaactcctccttcaacaacaacaacagcaacaa
cagttcctgaatcagagaaagttccctgctcctccaagaccgcagcatgaccaacagcag
ttggcgcgtataatggctattctgcagcagcagcagggtttgggaggaggtaaactcccc
tcgtcccccatgggaggacctatctccaaacacccggacacacctcctctccatcatcag
aacaaacagccggatgcgtctcttcatgctgccatgggaggatctgagctgcacaacaaa
ccatctactgcgttcacaggttttgctggcgcctctgatctggattctctgatcggttct
tctggtggactgaaggatggaggaagtgttcagtctcgctttaaatggatgatggatgga
agcagtttaacaccttcaccaccagagcccacactgcacaacggtccagtgaaactgggt
ggtggctcctcgtactctcagtatgatgtgttgggtggaagctggcacagatcatcaggt
gttaaagtcgacacatcacctgtcaatccgacctggcctccagagtttcagccgggtgtc
ccatggaaaggcgtaccgagtcctgaaccggacccttacatgactcctgcaggactgctg
ggatcatctgttctcacagatacagaacatcatctcctgcaagataacacagggtcaaac
tcactcaacacacgtttgccttcacctggtgcctggccatacagtacctcagacccaaca
cacactgtacacgcttcagctaagtattcagaactgaagtccagttggccccctgagccc
attggacacggcaaatcatggaggaccaatcggaacagttctcatctgccccgccctcct
ccaggcctcaccagtcagaaacaggcgtggtcaggggaggggccacggatgcccagggtg
tgggggggaggagcaaacagtcacgagttgccctttaaacccgagtggagtgatggcgga
gcaggaaaatcttggctgttactacgcaacctcacaccacagattgacggctcaacactg
aagacgatctgtttacagcacggtccgctgctgacctttcacctcggtctgacacagggc
agtgctctgattcgctactgcagtcctcatgaagccgccaaagcccagagtgccctgcat
atgtgtgtcctgggaaacaccaccatcctagctgagttcatgagcgatgatgaggtcatg
cgctacttcacacattcccagaccactggggtcacggggtcacccgagggctcgtccggc
tctgaccccacgtcacgagagggcgtaggttcagacgagggcgcggcggtcaggatggcg
agcgcgggctggcaggggttggacgtgtcgggcggttctgggccggaaggacccggactc
gctctcctcagccagtggagcaacagcacagaggagggggcggggaaaggattctggggg
ggcgtggctcccggttaccacagcagcaacagcagcagcctgtggggcacttctcagtta
gaggacggcccagctggattgttgccaggcaacctgctcggaggcgggacagatagtttg
tga |
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