Paramisgurnus dabryanus (large-scale loach): 135770005
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Entry
135770005 CDS
T10799
Symbol
chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdab03036
]
135770005 (chd6)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
135770005 (chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
CHDCT2
DEAD
HDA2-3
HTH_Hrp3
Chromo_MIT1
MUN
Motif
Other DBs
NCBI-GeneID:
135770005
NCBI-ProteinID:
XP_065135671
LinkDB
All DBs
Position
7:33045071..33100354
Genome browser
AA seq
2962 aa
AA seq
DB search
MFNMQQKKKFRRRHTVQEKMKIQKKDKQMSATHVLKHTPSAAASHASDQNAQTTFPIGHL
GKDQLRIIGGPPNHCMAHPKHSGLREAGSATASPGLCPSPSPINSEEDDGGGGSRVKKKR
RKKEKKAPEWPKDGRGDVKPKRKEQKEAKELLPRKSKAPKEQKVHKKKEVQAKKEIKKGK
KGQEVKVKTQAKNATTHPPSKRGRKPKDQGAMPPEKRKKGKRKSDALLEAVESDDTASLS
TLATGGEESIDPMDTKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGSGRIPALSSSTL
AWQAEEPPEDEANIIEKILSVRTVKKETSPDEPPEVLEEFYVKYRNFSYLHCKWATLEEL
EKDPRIHQKIKRFRNKQAQMKHIFTEPDEDLFNPDYIEVDRVLEIAITTDTETGEEVTHY
LVKWCSLSYEESTWELQEDVDPVKIKEFEDLKKIPEVKLLERPLPEQWQKLERSRDYRNG
NQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLYEIFFMGLRGPFLIIAPL
STITNWEREFRTWTDINVIVYHGSQISRQMILQYEMYNRDEQGNIVAGQFKFHGVITTFE
MIMADCPELKKINWRCVVIDEAHRLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELF
SLLNFLEPSQFPSETTFLEEFGDLKTEEQVKKLQAILKPMMLRRLKDDVEKNLAPKEETI
IEVELTNIQKKYYRAILEKNFAFLAKGANQHNMPNLINTMMELRKCCNHPYLITGAEEKI
LESFRKTYSPDALDFQLQAMIQAAGKLVLIDKLLPKLLAGGHKVLVFSQMVRCLDILEDY
LIQRRYTYERIDGRVRGNLRQAAIDRFSKVDSDRFVFLLCTRAGGLGINLTAADTCIIFD
SDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRK
GSTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKG
STFAKASFVSSGNRTDISLDDPNFWQKWAKIAELEIDSKAEKESLVIDTPRVRKQTKHYN
SFEDDELMEFSELDSDSEERPCRSRRLSDRNRRYLRAECFRVEKNLLIFGWGRWKDILNH
GRFKWHLAERDMEVLCRALLVYCVRHYKGDDKIKSFIWDLITPTKDGHNQALQNHSGLSA
PVPRGRKGKKLKNQLSPPELKNADWLAHCNPEVVLQDDSYKKHLKQHCNKVLLRVRMLYY
LKVEVLGEAAAQSLEGIPASKLEVTLPDIDYIEIPTIWWDAEADKSLLIGVHKHGYERYN
AMRADPALCFLERVGMPDVSALTVEQGGVEAAADTPESITKNDELKEEIDSKSEELEEKG
DIKEEPMSEEIGKNDSTVTGGFVASLHADLLAEVVEQGRIQWPAGSALTARLRRLITAYQ
RYTRREPLRHEFLLHEGLAPVTWQIGDFRHCTTEPDPLFLEWQRRWTRREQADFYRTVSS
FGVVFDPEKKTFDWGQFRALARLERKTDESLDRYFYSFVSMCRTACRLPPRKEEGAVDPS
LFVEPITEERAARTLYRIELLRKVREQVLRHPLLGARLQLCRPSLYLPVWWECGKHDRDL
LIGVAKHGLSRTDFFILNDPQLSFLEAHRNYVHKENHRYPVPGLPHHHCCLYDANLGHCH
SPQPPEYHPATSHHTQTHQLIHTPSHHQPSEVVASEPGSISMGTGPREGFLDCTPLDDSL
ELGSLQHDGLTPDPLHSKSGKEAFNGFPFNSATGGQNMLNSYGVQGELNGAQGDIADTIA
GKLRSDVLVGEQGSSEETGLMAPSVELDELQTPWESSDHTETSDMFNETDPILGAPALET
GFLDAPPPDDGREGDETLTDCLSMPSSDSQSNPVEPLAPSFMLFKDLHVGETSVDQTDLS
AGLPEYVPPTTPLEIPDVSLDQADPISEEQEDKLSDTNITHSVPSPGEGTESLGFHFEKE
ELSLDSDSLATAGLKTKDAQYDNNKMPSVESPRENCFEESSPNMDCKVSFEDSCDGPLEE
SYEKAIGEPEKVPLEEPYDLTCDETLQEPCEGYRQNSAGQQMVEEPCKEPTEECNLTNAT
LSADYPLVSSLPSSPAILPDTSVSPGLEALPNIKQEYLMDPAVSDVKPEPDSTTQTPQLE
QTEVLEVKDKIKDEDAKTPVLLGDVEAPRFSLPMCEMVDSVHEIREPTIAQLLQEKALFS
FSEWPKDRVIINRIDSICHTILKGKWPSSSQQYESPSSLSNTCLPSSTNQRTGYLSTRMP
LSQSLNFNLSHTVQHLPKERLVAPAFLSELKRPRHGFEFEAEVLAKPSHLGEKIQVGVPH
RANALLLNGWQDAAMDLSKQPELTVGGESGPIGHMSQSATHKITGIGSMQGSLGLDMAGI
LQAGLIHPVTGQIINGSLRRDDSMLRRRRGRRRNVETSDLNFSKGRGLGLSEQQSGSESI
SHPVVSSTSPQSECSSTGPTTLSAPPSAPPPPPPPTETLNASTERDVANKGLMEWLRQNP
NYNMELPTYASSQSANMLHSFLDRPKQRRHRCKDPTKLDVNSLTGEERVPVVHRSTGRRL
GGAMAPAIKELSRWLDANSEYFVAPDWADVVKHSGFLPEGKFTRILAGPVCRDTGPRRRG
RRPRSEMPKPPELPAGMGPLFMNGGIISSMDLVSLPNLRNVPGIPLTGIMGFPHGFATAV
PSGDDGKNGLGMLPMMLHGMATVQPSMYSAHMSGMMSQATSTVSTATASSSAASVTSTNS
ATITSTSSPADGSDTTPQRDNAGSPVSTESGNKEETKQGGEERKNISGTVSTGAATTSSS
SSITTTGSHLTFNPFLIPGMSHSLLYPHMFLPPGSIMALPAMPAADSTGSPKRKRKKIRE
EGLVERSFILHLDGVEVKGVKDEQTAEIKNQQGRTEDRSDLELAQVTGDPKNDPSEDTST
EMSENLKVEPDQDAQASCDGED
NT seq
8889 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatatgcaacagaaaaagaagtttagacgcagacacacagttcaagaaaaaatg
aaaatacaaaagaaagacaagcagatgtctgccacccacgtactaaagcacactccatcc
gccgctgcctcacatgcctctgaccaaaacgcacaaacgacatttcccatcgggcacttg
ggcaaagaccagttacgaatcatcggaggcccgcccaatcactgcatggctcacccaaag
cactctgggttacgggaggcggggtccgcgaccgccagcccgggtctctgcccgtcgccc
tcgccaatcaacagcgaagaggacgatggagggggcgggtccagagtgaagaagaaacgt
aggaaaaaagagaagaaagcgccggagtggccgaaagatggacgcggcgatgttaaacca
aagaggaaggagcaaaaagaagcaaaggagcttcttccgagaaagtcgaaggccccgaag
gaacaaaaggttcacaagaagaaggaggtgcaagctaaaaaggagatcaaaaagggcaag
aaaggtcaagaagtgaaggtgaaaacgcaggccaagaacgctacaacacatccaccctcg
aaaagagggaggaagccaaaagatcagggtgccatgccaccagagaagaggaagaagggc
aagaggaaaagtgatgcgctcttggaggcagtggagagcgatgacacggcgtctctcagc
acactggccactggaggagaggagagcattgaccccatggacactaagaggcgttcgggg
cgtcaggtaaagcgtcgaaagtataatgaagatcttgatttcaaggtcgtagatgatgat
ggggagaccatcgctgttttgggctcgggccgaattcccgccctctcttcctctaccctt
gcttggcaggctgaggaaccccctgaagatgaagccaatatcattgagaagatactctca
gtgcgaacggtcaagaaagagacgtctcctgatgaaccaccagaagtgttggaggagttt
tacgttaagtacagaaatttctcttatctacactgtaaatgggcgaccttggaagagctg
gaaaaagacccacgcattcaccaaaaaatcaagcgcttcagaaacaagcaggcacaaatg
aagcacattttcactgagccggatgaagacctctttaatccagactacattgaggttgat
cgggttttagagatcgctatcactacagacacagaaaccggagaggaagttacacactac
ctagtaaaatggtgctctctgtcatatgaggagagcacttgggagctacaggaagatgtt
gaccctgtgaaaatcaaggagtttgaagacctcaagaaaattccagaagtcaaacttctg
gagagacctcttccagaacaatggcagaaactggaaagatctcgagattacagaaatgga
aaccagctaagagaatatcagttagagggaatgaactggctgctcttcaactggtacaac
aggaaaaactgtatcctggccgatgagatggggctcggaaagaccatccagtccatcacg
ttcctgtatgagatcttcttcatgggtttgagaggaccatttcttatcatcgcgcctcta
tccaccatcaccaactgggagagagagtttcgtacctggaccgatataaacgtcatcgtg
tatcatggcagtcagatcagccggcaaatgatcctgcagtatgagatgtacaacagagac
gaacagggaaacatagtggccgggcagtttaagtttcatggagttatcactacatttgaa
atgatcatggcggactgtccagagctgaagaagattaactggcgctgtgtggtgatcgac
gaggcccaccgtcttaaaaaccgaaattgcaaacttctggagggtctaaaactcatgaac
ctggaacataaggttcttctaacaggaacccctttgcagaactcggttgaggaacttttc
agtctcctcaacttcctcgaaccttcgcagttcccgtctgagaccactttcctggaggag
tttggagacctgaaaacagaggagcaggtaaagaaacttcaggccattctgaagcccatg
atgttgaggagactaaaggatgacgtggagaagaatctggcccccaaagaggagacaatc
atcgaggtggagctcactaacattcagaagaaatactacagagccatcctggagaaaaac
tttgcctttcttgccaagggagccaaccagcacaacatgcccaacctcataaacacaatg
atggagcttcgcaagtgttgcaatcacccgtaccttataacaggtgccgaagaaaagatt
ctggagagcttcagaaagacctacagtcctgatgccttggatttccagctccaggccatg
atccaggccgctggtaaattagtgcttatagacaagctgctgcccaaacttctggctgga
ggacataaagtgctggtgttttcacagatggtcagatgtctggatatactggaagactac
ctcatccagagaaggtacacgtacgagcgcatcgacgggagggttcgagggaatctacgg
caggccgccatcgatcgcttcagtaaggtggactccgaccgcttcgtgttcctcctctgt
acccgggcgggagggctgggtatcaacctcaccgccgcagacacctgcatcatattcgac
tcggactggaacccgcagaatgacttgcaggctcaagctcgctgccaccggattggtcaa
agcaaagcggtaaaggtgtatcgccttatcacgagaaactcatacgagagggagatgttt
gacaaagccagtttgaaacttggattggacaaggctgttctgcaggacataaaccgcaag
ggaagtacaaacggggttcaacaactttccaaaatggaggtagaagatcttctcaggaag
ggagcgtacggagcgctcatggacgaggaagatgagggctctaaattttgtgaggaggac
atcgatcaaatccttcagagacgcacgcagaccattacaatccagtccgagggaaaggga
tcaacttttgccaaggcaagctttgtatcgtcagggaaccgtacggacatctctctggat
gatccaaacttctggcagaagtgggccaaaatcgcagagctggaaattgactccaaagct
gaaaaggagagtttagtcatcgacacgcctcgtgttcggaagcagacaaagcactataat
tcgttcgaggacgatgaactgatggaattctcagaactcgacagcgactcggaagaacgt
ccctgtcgctcgagacggcttagcgatcgcaatagacgctacctccgcgccgagtgcttc
agagtggagaagaacctgctcatttttgggtggggtagatggaaggatattctcaatcac
gggcgttttaaatggcatctggcggagagagacatggaggtcctgtgcagagctttactg
gtctactgcgttcggcattataaaggtgacgataaaatcaagagcttcatatgggatttg
atcacaccaaccaaagacggacacaaccaagccttacagaaccattccggtctgtcagct
cctgtcccacgtggtcgcaaaggcaaaaagctgaaaaaccagttgagtccacctgagctg
aagaacgcagactggctggcccactgtaatccagaggtggtccttcaggacgacagctac
aagaaacacctcaagcaacattgcaacaaggttttgctgagggtacgaatgctttactat
ctgaaggtggaagttctgggggaagctgctgctcagtctcttgaaggaatcccagccagc
aaactggaggtcaccttgcctgatattgactacattgagatcccaaccatatggtgggat
gctgaggctgataaatctctgcttattggagtccataaacatgggtatgaacgctataat
gccatgcgtgcggaccctgcgctttgttttctggagcgggtgggcatgcctgacgtcagt
gcattgacagtagaacaaggtggagtagaagcagctgcagacacacctgaaagtattacc
aagaatgatgaactgaaagaggagattgattcaaagtctgaagaattagaagagaaagga
gatattaaggaggagcccatgtcagaagaaattgggaaaaatgacagtacagtgacaggc
ggctttgtagcgtcgctccatgcagatcttcttgcagaggtagttgagcaggggcgcata
cagtggcctgcggggtcggctcttacagcacgattacgacgactcattaccgcctatcag
cgttacactcgacgtgagccgcttcgtcacgagtttctcttgcatgagggactcgcacct
gtgacctggcaaattggagattttaggcactgcacaactgagcctgacccgctgtttctg
gagtggcaacggagatggacacgccgtgagcaggctgacttctatcgcaccgtgtcgtcg
tttggggtcgtttttgacccagagaaaaaaactttcgactggggccaattccgtgctctt
gctcgtttggagaggaaaacagatgaaagtttggatagatatttctatagctttgtttcc
atgtgtcgcactgcctgtagactgccacctagaaaagaagaaggtgctgttgacccttcg
ctgtttgtggaacccattacagaagagcgagctgcccgaaccttataccgtattgagctt
ttgaggaaggtccgtgagcaagtattacgccacccgctcctgggcgcacggctgcagctt
tgtcgtccaagtctttatttgcccgtttggtgggagtgtggcaaacacgaccgtgatctt
cttattggcgttgctaagcatggtttaagccgaactgactttttcattttaaatgacccc
cagctatcctttctggaagcccaccgaaactatgtccacaaagaaaaccatagataccct
gttccaggtttgccccatcaccactgctgcttgtacgatgccaaccttgggcattgtcac
tccccacaacctcccgagtaccatcccgcaacctcacaccatacacaaacccatcaactc
atccatactcctagtcatcaccagccatcagaagtagtggcgtcagagcccggaagcatc
agcatgggtacgggaccaagggagggatttttggactgtactccattagatgactccctt
gagctggggtctttgcaacacgatggcttgacgccagatcccctacatagtaagtctggt
aaggaggcctttaatgggttcccctttaattctgcaactggtgggcagaatatgctaaac
tcatatggtgtccaaggagagcttaatggagctcaaggagatatagcagacaccatagct
gggaagcttcgtagcgatgttctggtgggagagcaagggtcctcagaggagactggctta
atggcaccttctgtggaactagacgaacttcaaacaccatgggagagctcggatcatact
gaaacctcagacatgttcaatgagaccgatcctattctgggtgcaccagcattggaaaca
ggatttctggatgctcctccaccagacgacggacgggaaggtgacgaaacgctcaccgac
tgtttgagcatgcccagttcagactctcaaagtaaccctgttgagccacttgcaccaagt
ttcatgctctttaaagatcttcatgtaggagagacttctgtagatcagacagatctgtca
gctggtcttccagaatatgttccaccaacaacacccctcgaaataccggatgtaagtctt
gatcaagcagaccccattagtgaggagcaagaggacaagcttagtgataccaacatcaca
cacagtgttcccagtccaggagaaggaacggaaagtttagggtttcattttgagaaagaa
gaactttctctggatagtgacagtctggcaacagcaggtctaaagacgaaggacgctcaa
tatgacaacaacaagatgccttcagtagagtccccaagagaaaactgctttgaggaatca
tcaccgaacatggactgcaaggtatcatttgaggattcttgtgatgggcccttggaagaa
tcgtatgaaaaggccataggagagccagaaaaagtgcctttggaggagccatatgatttg
acctgtgacgagaccctgcaggaaccttgtgaagggtaccggcagaactcagcggggcaa
caaatggttgaagaaccctgcaaagaaccaacagaggagtgcaatctaacaaacgctact
ctctcagcagattaccctttggtgtcttcacttccatcatctccagctattttacctgac
acctctgtatctccgggccttgaggcactccccaacattaaacaagagtacctcatggat
ccagcggtgtcagatgtgaagccagagccggacagcactacacagactcctcagcttgag
cagactgaagttctggaagtaaaggataagataaaggatgaagatgcaaagacaccagtc
ttattgggagatgttgaagccccacgcttttcattgcccatgtgtgagatggtggacagt
gtccatgaaataagggaaccaaccattgctcagcttctccaggagaaagccctcttctcc
ttttctgagtggccgaaggacagagtgatcatcaaccgtattgacagtatctgccacact
atcctcaaaggaaagtggccttcatctagtcagcagtacgagtctcccagctcgctatcc
aacacctgcctgcccagcagtaccaatcagaggacaggatatttgtcaaccagaatgcct
ttgtctcaaagcctgaactttaatctgtcgcacactgtacaacacttacccaaggagcgt
ttagtagcccctgcttttctctcagaactgaaacgtcccagacacgggttcgaattcgaa
gcagaggttcttgccaaaccaagccaccttggagaaaagatccaggttggcgtacctcac
cgtgccaatgctctgcttctgaacggctggcaggatgctgccatggacctctccaagcaa
ccagagctaacggttggtggagaaagtgggccgatcggtcacatgagccaatcggcaact
cataaaataactgggattggctccatgcaaggctctctgggattggatatggcgggtatt
ttgcaggctgggttgattcacccagttacagggcagattatcaacggcagccttcgccgc
gatgattcgatgttgaggaggagaagaggacgaagaagaaacgtggagacctctgacctg
aacttctcgaaggggcgaggacttggcttatcagaacaacagagcggatcagaaagtatt
agccatcctgttgtgtcgtctacatccccccagtcagaatgttcctcaaccggcccaact
acactttctgcccctccttcggccccccctccacctcctcctccaacagaaaccctcaac
gccagcacggaaagagatgtagcaaacaaaggtctcatggaatggcttcggcagaatccc
aattacaacatggagcttcccacgtatgcctcgtctcagagcgcaaacatgttgcacagt
ttcttggatcgaccaaagcagagaagacatcgttgcaaagaccccaccaaacttgatgtc
aactccctaaccggagaggagagggtcccagtggtgcaccgaagcacaggccgaaggctt
ggtggcgctatggctccagcaattaaggagctgtcccgatggctggatgcaaactctgag
tactttgtggctccagattgggcagatgtggtaaagcattctggctttctcccagagggc
aaatttactcgcatcctcgctggacccgtgtgccgggatactggtccacgtaggagaggc
aggcgaccccgcagcgagatgcccaaaccgcccgagctcccagctggtatgggtccactc
ttcatgaacggtggcatcataagcagcatggacctggtgagcttacccaatctccgtaat
gtcccaggcatcccgctaacaggcatcatgggttttcctcacggttttgccactgcggta
ccgtcaggagatgatggcaagaacggacttgggatgctgcccatgatgctccacggcatg
gcgaccgtgcagccttccatgtacagtgctcacatgagtggcatgatgagtcaggcgacc
tcaacggtttccacagcaaccgcatcctcctccgcggcaagcgtgacttccacgaactcc
gcgaccataacttcaacctccagcccggcggatggttcggataccacaccgcagcgggac
aatgccggatctccggtgagcacggagagtgggaataaggaagagacaaagcaaggaggg
gaagagaggaaaaatatatccggcacggtgtctacaggtgcggccaccaccagcagtagt
agtagtatcacaacaaccggcagccatttgacctttaacccctttcttatcccgggaatg
tcccatagtctgctgtacccgcatatgttcttaccccccggcagtataatggcgctgcct
gctatgcctgccgcagacagtacgggcagccccaagaggaagaggaagaaaattagggag
gaaggactggtggagcgaagttttatcttgcacctggacggcgttgaagtcaagggggtt
aaagacgaacagacagccgaaataaagaatcaacagggcagaacagaagaccgatctgat
ttagaattagctcaggtcacaggtgatcctaaaaacgatccctctgaggatacaagtact
gaaatgtcggaaaatttaaaagtggaacctgatcaagatgcccaagcttcatgtgatggt
gaagactaa
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integrated database retrieval system
