Paramisgurnus dabryanus (large-scale loach): 135770100
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Entry
135770100 CDS
T10799
Symbol
dhx58
Name
(RefSeq) ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
135770100 (dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pdab04054
]
135770100 (dhx58)
Enzymes [BR:
pdab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135770100 (dhx58)
Pattern recognition receptors [BR:
pdab04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
135770100 (dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
ARMH2
AAA_22
Motif
Other DBs
NCBI-GeneID:
135770100
NCBI-ProteinID:
XP_065135842
LinkDB
All DBs
Position
3:23733374..23741035
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AA seq
679 aa
AA seq
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MAIDLRPYQEEVVQAALRGENSIIWLPTGGGKTRAAVYVTKRHLETKANAKVAVLVNKVH
LVDQHYEKEFKPLLGKDYKIMPVSGDSDEKDFFGRVVKKSDVVICTAQILENALTNMDEE
KHVELTDFTLLVIDECHHTNKDAVYNKIMSRYVEKKVDKEGNLPQVLGLTASPGTGGNRS
LDKAVEHVLQICANLDSVIVSTKNHKPVLKKVVPRPIKRYDIVEKRHLDPFADHLKLMMS
MIHEFMPPTVTFGLREKGTQEYEADVVELRKTGVLQENRLIAQCALHLRQYNDALLINST
VRMVDAFRLLDDFYKSMENNLLDGTDFFLQGLFEENRVELKLLASNPCFENPKLAELEHV
LVEQFKDKSSRGIIFSKTRRGTHNLLEWVISNPELRRVNIQAGILTGAGTGAQHMTQSEQ
KETIKKFRDGGLNLLISTSVAEEGLDIKECNVVVRYGLLTNEIAQQQASGRARAENSIYS
VVAEEGGREIRRELTNEYLEDLTAKAIEQVQSMTPREFRLKISELQKTAVMIRIMAEKQK
EERSQRFIPAGVQFLCNGCFTPVCHGDDFRSIENSHRVNINPLFKRYYNVGGQVTLERRF
EDWEPGRIISCSKCGKNWGWEIKYKKVAILPCLKLENFSLNTPEGKCSPKKWKKVPFQVQ
DFDFTKYMEDRLDDLDLDD
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgatcttcgaccgtaccaggaagaggtagtgcaggctgctctcagaggagag
aacagcatcatttggctccccacaggtggaggaaaaacccgtgctgctgtctatgtcacc
aagagacacctagagacaaaagccaatgctaaagtggcagtgcttgtcaacaaggtgcac
ctggtagaccagcactatgagaaggaattcaaacctcttcttgggaaagactataagatc
atgcccgtcagcggtgacagcgatgaaaaagacttctttggacgcgtggtcaagaaatct
gacgttgtgatctgcactgctcagatcttggagaacgccctgaccaacatggatgaggag
aaacatgtggagctcacagacttcaccctgctggtcatagacgaatgccaccacacaaat
aaggatgccgtctataacaaaattatgagccgctatgtggaaaagaaagtggataaagaa
ggaaatttgcctcaggttttgggtcttacagcatcacctggtactggaggaaacaggtca
ttggataaagctgttgaacacgtcctgcagatctgtgccaatctggattctgtaattgtg
tccaccaagaaccacaaaccagtgctgaaaaaagtcgtccccaggcccataaagagatac
gacattgttgaaaaaagacatctggacccgtttgctgaccatctaaagttaatgatgtca
atgattcatgagttcatgccgccaacagtgacttttggtctgcgtgagaagggcacccag
gaatatgaagctgatgttgtggaactgcgcaaaacaggtgtactgcaggagaacagattg
atagctcagtgcgctctgcatctgcggcaatacaacgatgctctgctcattaatagcact
gttcgcatggtggacgcgtttcggcttctggatgatttctacaagtcaatggaaaacaac
ttgctggatggcactgacttttttctccagggactttttgaagagaaccgtgtggagcta
aagctgctggcgtcgaacccctgcttcgaaaaccccaaactggccgagttggaacacgtg
ctggttgaacagtttaaagacaaaagctctcgtggcatcatcttctcaaagacccgcaga
ggaacccacaatcttcttgagtgggttatatcaaaccctgagctgcggagggtcaacatc
caagctggaattctcactggagcgggcacgggtgcacaacacatgacccagagtgaacaa
aaggaaactattaaaaaatttcgagatggaggcctcaacctcctaatttccaccagcgta
gctgaggaaggacttgacataaaggaatgcaacgtggttgtacgttatggcctgttgacc
aatgaaatcgctcagcagcaggccagtgggcgggctcgagctgagaacagcatctactca
gtggttgccgaagaagggggacgtgaaatacgcagggaactcaccaatgagtatctggaa
gatctgactgcaaaagctattgaacaagtgcaaagcatgactcccagggagttcagacta
aagatttcagagcttcagaaaactgctgttatgattcggatcatggctgaaaagcagaag
gaagagagaagtcagcgcttcattcctgctggtgtacagtttctgtgcaacgggtgcttt
actcctgtttgccatggagacgatttcagaagtatagagaattcacaccgtgttaacatc
aatcctctgtttaagaggtattataatgttggtggtcaggtgactttggagagaaggttt
gaagactgggagcctggaaggattatcagctgcagtaaatgtggaaagaactggggatgg
gagattaaatacaagaaagtggcaatactcccctgtttgaaattagagaatttttcattg
aatactcctgaaggcaaatgttcacctaagaagtggaaaaaagttcctttccaagtgcag
gattttgactttactaaatacatggaagaccgtttagatgatctggacctagacgactaa
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