Paramisgurnus dabryanus (large-scale loach): 135770754
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Entry
135770754 CDS
T10799
Symbol
robo1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135770754 (robo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pdab04515
]
135770754 (robo1)
Cell adhesion molecules [BR:
pdab04515
]
Immunoglobulin superfamily
ROBO family
135770754 (robo1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_VEGFR-1-like_5th
Pur_ac_phosph_N
Ig_5
FN3_DSCAM-DSCAML_C
Unc5_NetrinR_N
Ig_4
Ig_PDGFR_d4
DUF7908
Motif
Other DBs
NCBI-GeneID:
135770754
NCBI-ProteinID:
XP_065136600
LinkDB
All DBs
Position
8:11991034..12346587
Genome browser
AA seq
1678 aa
AA seq
DB search
MQITWSASLPIIFTLLQFVQSEQLEGALVPDTETQEGGSNRATEAPTAEHGDDNSLGYTG
SRLRQEDYAPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDGERVETDRDNPRSH
RMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSHNASLEVAILRDDFRQNPVD
VMVAAGEPAVMECMPPRGHPEPTISWKKDGVTIDDRDERITIRGGKLMITNTRKTDAGKY
VCVGTNMMGERESEIAELTVLERPSFLRKPSSQSVLVDQSVEFRCEAQGDPVPTIRWRKD
DGELPKGRHEIWEDHTLKLKRLTSGDAGTYTCQAENMMGKTEASASLTIHVPPVFVVRPR
NQVVGMGRTVTFQCEATGSPQPAIFWQKEGSQNLLFSSQPPPPSSRFSVSQTGDLTITMV
ERSDGGYYSCQALNIAGSVITKALLEVTDVISDRPPPIVRQGPTNQTVSVDGTVILGCQA
TGTPTPTILWRKDGVLVSTHDSRLKQLDTGALQIRYAKLGDTGVYTCTASTPSGEASWKA
YLEVQEFGAPVQPGRPTDPNLIPSAPSKPDVTEVSRTSVSLSWKPNLNAGATPTSYVIEA
FSHAAGSSWQTLADHVKTESFVLKGLRPSAVYLFLVRAANAYGLSDPSPISDAVKTQDVP
PTSQGVEHGQIQRELGDVVIHLHNPTVLSSSSVRVQWTVEQQSQYIQGYKVMYRPSPDGA
LQRVEWAVFEVRTLGEHSTVVTQLRKGVTYEFKVRPFFNEFQGTDSDVKVAKTLEEAPSA
APRGVTVTGSGDNGTAILVSWQPPPEEEQNGVVQEYKIWCLGNESRYHINRTVDGTTFSV
LIPGLVVGVPYRLEVAAGTGAGPGVKSETTFFQLDSSGRMVSSPLDVENTISQQISDVVR
QPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSYAGIRKVPSFTFTPTVAYQRGGEA
VTSAGRPGLLNMGEPATQPWLADTWPNSCSNHNDCTINCCTGSNGNSDSNLATYSRPADC
IANYANQMDNKATNLLAPDTGLYSDVDLSNKINEMKTFNSPNLKDGRFVGPGGQPTPYAT
TQLIQSSLANNNMNSSGGSGGGSGDLNEKQSWKSSQGTPQKQADINAPLQFNVMEQNKLN
KDHYRGEGPISVTIPYNQTQESHTGGTYSSSDRGSSTSGSQGQKKGGRTTKQAKQNTMNW
ADLLPPPPVNPPLCQEYTLPIDDSYDTDLQCPMPPSRMYLQPDELEEEEAELERGPTPPV
RGAASSPAAVSYSHQSTATLTPSPQEEMHPMLQDNADLHERRRLLVSPPPPPRPLSPPHT
YGYISSPLGLDTDGLEEEEEEEEGDETDAEVAMVHQHHTHTHQQHLAQQRALLRGLEQTP
ASSTCDLESSVTGSMINGWGSASEEDNASSGRSSAVSSSDGSFFTDADFAQAVAAAAEYA
GLRVAKHSGKGHHQLPASGAARKYQNLPPGHRPGSPLSSDSNISSAPGQRRPLKRQKQHP
PAQTGYQRREAFSEDLPPPPIPPPAMLKSPTHPAKTIPDGPRGVVSPRSSSADGKDRRTG
PGGPRPRDGSDTRTSSSERREAQDLQRGPRTAKSSKQDAAKSRQHQGSEDILPYSRPSFP
AVHSPRGERDPSSSSSLSSRGSGGRRRGEVAPGARRNPSDFGLNAFQIEGDELEMVES
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacatggtcagcctcactcccaataattttcaccctgctgcagttcgttcaa
tcggagcagttggagggggctttggttccagacacggagactcaggagggaggtagcaat
agggccacagaagcccctactgcagaacatggggacgacaactcgctgggctacacagga
tcccgtctgcgacaggaagactacgcgccccgcatcgtagaacacccctccgatctgatc
gtatccaagggcgaacccgccaccctaaactgcaaggcagaagggcggcccacccccacc
gtggagtggtacaaggatggagaacgagtggaaacggaccgggacaatcctcgatcgcat
cgcatgcttctgcccagcggctctctcttcttcctacgtatcgtacatggccgtcgcagc
aaacccgatgaaggctcctacgtctgtgtggcccgtaactacctgggagaagcggttagc
cacaacgcctctctggaagtagctattcttcgggatgatttcagacagaaccctgtggac
gtgatggtagcagcgggcgaaccagcggtcatggagtgcatgccaccccgcgggcaccca
gaaccaactatttcatggaagaaagacggagtcactatagacgacagggatgagaggatc
acgatacgtggaggaaaactgatgatcaccaacaccaggaagacggatgctggaaagtac
gtatgcgtgggaaccaatatgatgggggagcgagagagcgaaatcgcagagctgactgtt
ctcgagaggccaagttttttacgaaagccgagcagtcagtcggttctggtggaccagagc
gtcgagttcaggtgtgaagctcaaggtgatccggtgcccaccatccgctggaggaaagac
gacggagagcttcctaaaggacgacatgagatctgggaggaccacactctcaaactgaag
aggttgacctcgggagacgccggtacttacacctgtcaggcggagaacatgatggggaag
acggaagccagcgcctcgctcaccatccacgttcctccggtgtttgtggtccgacccagg
aatcaggtggtcgggatggggcgcacggtgacctttcagtgtgaagctacaggaagtcct
caacctgctatcttctggcagaaggaaggcagtcagaacctcttgttctcctctcagcct
cctcctccctccagtcggttctctgtttctcagacgggcgacctgaccatcaccatggtg
gagcgttcggatgggggttattacagctgtcaggccctgaacatcgccggcagtgtgatc
accaaagctctgctggaggtcacagatgtaatatcagatagacctccacccatcgttcgc
cagggtcccaccaaccagaccgtgtcagtggatgggacggtgatcctgggatgccaagcc
acaggtaccccgactcccaccatcctgtggaggaaggatggggtcctggtgtccacccat
gactctcgcctcaaacagctggacacgggagcgctgcagatccgttacgctaagctggga
gataccggcgtgtacacctgcaccgcgtccaccccaagcggagaggcatcgtggaaggcc
tacctggaggtgcaagagtttggtgctccggttcagcccggcagacccacggatccaaac
ctcattcccagcgccccctctaaaccggatgtcaccgaagtcagtcgcacctctgtgtct
ctgtcctggaagcccaaccttaacgccggagccacgcccacctcatacgtcatagaggcc
ttcagccacgcggcagggagcagctggcagaccctcgccgatcatgtgaaaaccgagagt
ttcgtcctgaagggtctgaggccgagcgccgtctacctgttcctggtgagagcagccaat
gcgtacggcctgagcgacccaagccctatcagcgatgctgtcaaaacgcaagatgttcca
ccaacaagtcaaggagtcgagcatgggcagatccagagagagttaggagatgttgtcatt
caccttcacaatcccacggtcctctcttcttcttctgtgagagtccagtggacggttgag
cagcagtcgcagtatattcagggatacaaggtgatgtaccgtccctccccagacggtgct
ctacagcgtgtggaatgggccgtgtttgaggttcgaaccctcggggaacacagcacagtc
gtcacccagctcaggaagggcgtgacctatgagtttaaagtacgacctttcttcaatgag
ttccaagggactgacagcgatgtcaaagtggccaagaccctggaggaagcgcccagcgcc
gctcccaggggagtcactgtaacaggaagtggagacaacggcacagctatcctggtatcc
tggcaaccgcctccagaggaggagcagaacggtgtggtgcaggaatataagatctggtgc
cttggaaatgaaagccgctatcacattaaccgaacagtggacggtactacattttcagtt
ttaattcccggcctggtcgtcggggtgccgtacaggttggaagtggcggccggcacaggg
gccggccctggggtaaagagtgagaccaccttctttcagctggattcatcgggccgaatg
gtttcttcgcctctggatgttgaaaacaccatttctcagcagatctcagacgttgtgcgt
cagcctgcgttcatcgcgggcatcggcgcggcgtgctggatcattctcatggtctttagc
atctggttgtaccgtcaccgcaagaagaggaacggactcagcagcagctacgctggaatc
cgcaaagtgccctccttcaccttcacccccacagtggcctatcagagaggaggagaggct
gtcaccagtgcaggaaggccaggtctgttgaatatgggcgaaccggcgactcagccctgg
ctggcggacacctggcccaacagctgctccaatcacaacgactgtaccatcaactgctgc
acaggaagcaatggaaacagtgatagtaacctggccacctacagccgcccagccgactgt
atcgccaactatgccaaccagatggacaacaaggccaccaaccttctggctccagacacg
ggcctctacagcgatgtggacctttccaataagatcaacgagatgaagaccttcaacagc
cccaatctgaaagacggacgtttcgtgggacccggaggtcaaccgacgccctacgccacc
actcaactcatccaatccagcctggccaacaacaacatgaacagcagcggaggaagtgga
ggaggaagtggagatctcaacgagaagcagagctggaagagcagccagggaactcctcag
aaacaagccgacatcaacgcgccgctccagtttaacgtcatggagcaaaacaaactgaac
aaggaccactacagaggtgaaggccccatctcggttaccatcccctataaccagacccag
gagagccatacaggaggaacctacagcagctcggacagagggagcagcacatctggaagc
caagggcagaagaaagggggacgcacaactaaacaggctaaacagaacacaatgaattgg
gctgatctgctgccccctcctccagtcaatccacccctttgccaggaatataccctcccc
attgatgacagttacgacacagatctgcagtgccccatgccgccctctcgcatgtacctg
cagcctgatgagctggaggaggaagaggcggagctagagcgaggacccacccctcccgtg
aggggtgccgcctcctctcctgccgcagtctcctacagccaccagtccactgcgaccctc
accccgtcccctcaggaggagatgcatcccatgctgcaggacaacgctgacctacatgaa
cgcaggcggctcttggtaagtcctccccctccgccacgccctctctcccctccgcacaca
tacggctacatctccagcccgctaggcctcgacaccgacggactggaggaagaagaagaa
gaagaggaaggtgacgagacggatgcagaagtggcaatggtccaccagcaccacacccac
actcaccagcagcacttagcccagcagcgggctctcctgcggggcctggagcagactccc
gcctcaagcacctgcgatctggagagttccgtcaccggttccatgatcaacggctggggg
tcggcatcggaggaggacaacgcgtcgtcgggccgctccagtgccgtcagctcatcggat
gggtctttctttaccgatgcggatttcgctcaggccgtggcggctgcggccgagtatgcc
ggtttacgagtcgcaaagcattctgggaaaggccatcatcagctgccagcatctggagcc
gcacggaaataccaaaacctcccaccgggacatcgtccaggcagcccattgtcctcagac
agtaacattagctcagccccgggtcagaggagacccttaaagagacagaaacaacatccg
cctgctcagaccggctaccagcgcagagaggccttctcagaggatctcccacctcctccg
attcctcccccggccatgctgaagtctccaacgcacccggccaaaaccatcccagatggg
ccgcggggagtcgtgtcccccaggtctagttctgctgatggcaaggataggcgaacaggc
ccgggaggacccaggccccgggatggctcagacacccggaccagctcttcagaacggcgc
gaggcccaggacctacagaggggtccgagaacagcgaagagcagtaaacaagatgccgct
aagagccgccagcaccaaggttcagaggacatcctaccgtacagccgtccgtctttccca
gccgtccacagccctcgtggagagagagaccccagctcctccagttcactgtcgtctcga
gggtccggaggacgacggagaggggaggtggctccaggggcccgcagaaacccttcagat
tttggcctgaacgccttccagatagaaggggatgaacttgagatggtggaaagctga
DBGET
integrated database retrieval system
