Paramisgurnus dabryanus (large-scale loach): 135770836
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Entry
135770836 CDS
T10799
Symbol
col4a4
Name
(RefSeq) uncharacterized protein col4a4
KO
K06237
collagen type IV alpha
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04382
Cornified envelope formation
pdab04510
Focal adhesion
pdab04512
ECM-receptor interaction
pdab04518
Integrin signaling
pdab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135770836 (col4a4)
04518 Integrin signaling
135770836 (col4a4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135770836 (col4a4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
135770836 (col4a4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135770836 (col4a4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdab04147
]
135770836 (col4a4)
00536 Glycosaminoglycan binding proteins [BR:
pdab00536
]
135770836 (col4a4)
Exosome [BR:
pdab04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
135770836 (col4a4)
Glycosaminoglycan binding proteins [BR:
pdab00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135770836 (col4a4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
135770836
NCBI-ProteinID:
XP_065136747
LinkDB
All DBs
Position
8:16108387..16166954
Genome browser
AA seq
1669 aa
AA seq
DB search
MTRILQITRLRLPFWWLLLAHMPIQTTLGGDKNELCSGRDCSVCQCFPSKGDRGPPGLLG
RPGPQGPSGFPGVQGQPGQKGQRGTIGFPGVAGPQGDRGVQGVRGHTGLDGVPGHPGPSG
PPGLPGKDGCNGTRGDPGLGGYTGQRGLPGPMGMPGIKGIKGSTAYRSEYAPGLPGPDGQ
PGPPGPQGFDGIVGPQGFPGPSGASGFMGTPGPIGPRGIPGDPGRSLAGPKGEEGEPGPK
GDPGQFEYVEPNPKDYVKGKKGDKGIKGMCGLPGVEGLIGPPAEKGEKGIIGLPGQRGIP
GYPGRIGFPGPKGQRGENGLPGLYGNPGLKGFPGDPGPKGYPEYVSNNKKGPFGDPGPPG
VAGPPGDRGMMGIPGPPGVFGPSGIGGMGEPGLMGLNGLKGEKGARGRVYSNTPDGTPGE
PGKQGPPGPKGNRGNAGPPGEFCIPGERGEVGGPGDRGPAGIKGVKGRKGPDGGCACKPS
GDQPGDRGPPGFPGLPGNPGRPGLQGPTGDPGPFGLRGVNGVAGPRGVQGPRGLKGEKGD
YVFINIKGEKGNIGPSGPPGNAGYSGKTGADGKMGNPGDPGPVGDNLFGLPGDRGFQGSF
GAKGARGQTGPAGPGIMGSVGRRGLQGDPGPEGQRGPPGPKGTSGSTLPCAPAPPGIRGN
KGPPGFPGSKGRPGDPGFKGQVGPNGPKGEKGDPGDYSSNGERGPPGYIGDPGDTGSDGD
SFDGSDGIPGNPGPQGLKGSLGDSLVGAPGPIGSRGLDGRPGPKGVPGPPGPVGLEGILG
IPGSPGKKGPRGFDGKMGSPGRPGIRPERCDGGDPGPPGQTGPPGYPGRQGSPGEKGSPG
ELGPAGVGTKGRPGCPGTPGSPGFPGLQGPPGPTGNDGIPGSNGVKGLPGYPGQNGCVGN
PGMTGPPGPPGPKGLKGLDGNPGYPGENGYKGQKGPRGPPGPPGETITVPVRGPVGPPGR
NGEIGFPGERGDKGTPGPPGQPGYPGLNGPPGFESGSRGPPGAPGEPGNPGRRGRPGPAG
IAGYSGQSGEPGDPGLTGIAGTPGFPGNDGLKGDKGESTGIPGRPGARGPSGEDGSKGQS
GQNGDPGDLGYEGPNGPRGLAGPPGSTGLAGYPGVVGPSGPCGKHGPEGPPGPPGAPGPN
GNIGNPGLRGPSGQPGLHGLNGLKGIKGEVGSRGLSLKGDAGPTGPTGDRGIRGDPGLQG
TSQPGIPGPRGQHGVQGEPGVTGPPGLPGEECKKYVPGQYGEPGYPGPDGPPGLIGEMGE
PGSVFTIRGDEGDPGPPGPPGYKGAKGYSGLSGAPGYQGPEGPKGEKGQSGPMGIPGPSG
PMGSCGPPGPCGVKGDRGDPGQKGDPGIVKTPTSPCAAPRGPTGPRGPPGPPGIQGLPGL
SGREGPKGLKGSAGAQGSSGPPGQPGLNGPPGGNGDTGPRGPIGFQGLQGPPGDPGPPVE
GPKSTSGFLLVMHSQLETVPSCPNGLTQLWEGYSLLYLEGQERAHTQDLGQAGSCVRIFS
TMPFSCCNMQSCDYASRNDKSYWLSTTASIPTMPLEGPEIRPHISRCVVCEASSPAIAIH
SQDASAPQCPPSWRSLWMGYSFLMHTGSGDQGGGQSLTSPGSCLRDFRSQPFVECQGPLG
TCHYFATIYSFWLTKVGTDRFNPIRRSTILNNEAEQRSSVSQCNVCMRI
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcatcctccagatcaccaggctccgcctacctttctggtggcttttattggcg
cacatgccgatacaaacaactttggggggtgacaagaacgaattgtgcagtggtcgtgac
tgcagtgtctgtcagtgctttccctctaaaggagatagggggcctcctggtttgttaggt
cgaccgggtcctcagggcccttcggggtttcctggcgtccaaggacagcctggtcagaag
ggtcagcggggaacaattggatttccaggggttgctggccctcaaggagacaggggcgtt
caaggagttagaggccatactggtttagatggtgtaccaggtcatcccgggccttctggt
cctcctgggcttccaggaaaggatggttgtaacggaactagaggagatcctgggcttggc
ggttacacgggacaacgcggcctaccgggaccgatggggatgcctggaataaaaggaatc
aaaggaagcaccgcttatagatctgaatacgcgcctggactacccggtcctgatggacaa
ccaggacctcctggacctcaaggattcgatggaattgttggtccgcaagggtttccagga
ccgtcgggagcttcagggttcatgggtacaccgggtccaattggtccaagaggtataccg
ggagacccaggaagatcactcgctggacctaaaggagaagagggggagcctgggccaaag
ggtgatcctggtcaatttgagtatgttgagcctaatccaaaagactacgtaaaagggaaa
aagggggataaagggattaaaggaatgtgtggattacctggggttgaaggactgattggg
cctccagcagagaaaggagagaaaggcattattggtttgcctggacaaagaggcattcct
ggttatcctggtcgaataggctttccaggacctaagggccagcgtggagaaaacggtctt
cctggtctttatggcaacccaggactaaagggattcccaggtgatcccggacctaaagga
tatccggagtatgtttccaacaataaaaaaggaccgtttggagatccaggccctcctggt
gttgccggaccacctggtgacagaggaatgatgggtatacccggcccacctggtgttttt
gggccgtctggaataggtgggatgggtgaaccgggtcttatgggtctcaatgggctcaaa
ggagaaaaaggggcaagaggaagagtatactccaacaccccagatggcactccaggggaa
cctgggaaacagggtcctccagggcctaaaggaaatcgaggaaatgctggccctcctgga
gaattctgcattcctggtgagcgaggagaagtgggtgggcctggtgacagaggacctgcg
gggataaaaggtgtcaagggacgaaaaggtccagatgggggttgtgcttgtaaacccagt
ggtgatcaacctggcgatcgtggccctccaggattcccaggtctccctggtaatcccggg
agaccgggcctccaaggtcctactggtgatccgggtccttttggcttgaggggcgtaaat
ggtgtagcaggtcccagaggtgtccaaggtcccagaggattaaaaggagagaaaggggat
tatgtgtttataaacataaagggggagaagggtaacattggtcccagtggaccgcctggg
aacgcaggatatagcggaaagacaggggctgatgggaaaatgggcaatcctggagatcct
ggacctgtgggagataatctttttggtttgccgggtgatagaggatttcaaggttcattt
ggagcaaaaggtgccagaggtcaaactggtcctgctggccctggcattatggggtcagtt
gggcgtcggggcctacagggagacccggggcccgaaggccaaagggggccccctggtcct
aaaggaacaagtggcagcacactaccctgtgctcctgccccacctggaatccgtggtaac
aaaggaccgcctggttttccaggtagtaaaggaaggcctggagatccgggatttaaaggg
caagtgggaccaaatggtcccaagggcgagaaaggggaccctggagattatagcagtaac
ggtgaaagaggtccaccgggatacattggagatccaggtgacactggctctgacggtgac
agttttgacggctcagatggtatacctggtaatcctggaccccagggtcttaaagggtct
ttaggagactcacttgttggggctcccggaccaatagggtcccgtgggcttgatggaaga
ccgggccccaaaggtgtccctggaccaccaggaccagttggattggagggtatattgggt
attcctggatctcctggtaaaaaagggccaaggggattcgatggtaaaatgggatcacct
ggtcgcccaggcatcagaccagagcgatgtgatggaggagaccctggtccacctggccag
actggaccacctgggtaccctggcaggcaaggctctcctggagaaaaagggtcacctggt
gaattaggacctgcaggtgttggaaccaaaggacgcccaggttgccctggtaccccaggc
tctccaggattccctggacttcaggggcctccaggaccaacagggaacgatggaattcca
gggagtaatggagtaaagggtttgcctggatatcccggacaaaatggctgtgttggcaac
ccaggaatgactggccctccggggccccctggaccaaaaggattaaaggggcttgatggg
aatccaggttacccgggggaaaacggatacaagggccagaaaggacccagaggacctcca
ggacctccgggagaaaccatcacagttccagtgaggggcccggttgggccaccaggacgt
aatggagagattggtttccctggggaaagaggtgataagggtacaccaggtccccccgga
cagccaggctatccaggacttaatggacctcctgggtttgaaagtggcagtcggggacca
ccaggtgcccctggagagccaggtaatcctggaagacgcggacgtcctgggccagcgggc
attgcgggatattctggccaaagcggagaaccaggtgaccctggattgactggtatagct
ggaactcccggtttccctggaaacgatggacttaaaggtgataaaggtgaatccaccggt
ataccaggacggcccggtgcgagaggcccatctggagaagacggatcgaaaggacaatct
ggacagaacggagatccgggtgaccttggctatgaggggccaaatggaccccgtggtctg
gcaggaccacctggtagtacaggtctggctggatatccaggtgtagttggaccctcaggt
ccatgtggaaagcatggtccggaaggtcctccggggcctcctggtgcaccaggccctaat
ggaaacataggaaaccctggcctcagaggaccttcagggcaaccggggctacatgggcta
aatggcctgaaggggatcaagggtgaagtggggtccagggggttaagtttaaagggtgac
gcaggacctacaggaccaacaggagataggggtattcgaggggatccagggttgcaaggc
acatcacaaccaggtatccccggtcctagaggacagcatggggttcaaggagaacctggt
gtaacaggtcctccaggtttacctggcgaggaatgtaaaaagtatgtacctggacaatat
ggagaaccgggttaccctggaccagatggaccaccagggctcatcggagagatgggagag
ccaggcagcgtgttcacaattcgtggtgatgaaggtgacccaggcccccccgggccaccg
ggttataagggagccaaagggtacagtggactcagtggagccccaggatatcagggccca
gaaggtccaaaaggtgaaaaaggacaatctggacctatgggcattccaggaccctctggc
cctatgggtagctgtggtcccccaggaccctgtggtgtaaaaggagacaggggagatcca
ggtcagaaaggagaccctgggattgttaaaactcctacatctccttgtgctgctccacgc
ggacctactggtccccgtgggcctcctggcccgcctggaattcagggtctgcccggacta
agtggcagagagggcccaaaaggtttgaagggatcagcaggggctcagggatcctctgga
ccacctggtcaaccaggattgaatggaccacctggaggcaatggagatacaggcccaaga
ggaccgataggctttcagggactccaaggaccccctggtgatccgggtcctcctgttgaa
ggtccgaagtctacttctggattccttctggtgatgcacagccagttagaaaccgtgcct
tcttgtcccaacggcctgacccagttgtgggagggatacagcctgctttatctggagggt
caagagagggcgcacacacaagacctgggccaggcaggttcatgtgtgcgcattttcagc
acaatgccgttctcctgttgcaatatgcaatcgtgcgactacgcgagccgcaacgacaaa
tcctattggctgtccaccacggcttccattcccacgatgcctctggaggggccagaaatt
cggccgcacattagcagatgtgtcgtatgcgaagcctcatcgccagccattgcaatacac
agtcaagacgcatctgcaccacagtgtccacccagctggagaagtctctggatgggatat
tcattccttatgcataccggatcaggggaccagggtggcggacaatctctgacatcacca
gggagctgtttgcgggactttcgcagccagccgtttgtggagtgtcaaggtccgcttggc
acatgccattattttgcaacaatctacagtttctggctgactaaagtgggcacggaccgt
ttcaaccctatccgacgcagtactatactaaacaatgaagccgaacagcgcagtagcgtc
agccaatgcaacgtctgcatgagaatctga
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integrated database retrieval system
