Paramisgurnus dabryanus (large-scale loach): 135770837
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Entry
135770837 CDS
T10799
Symbol
col4a3
Name
(RefSeq) uncharacterized protein col4a3 isoform X1
KO
K06237
collagen type IV alpha
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04382
Cornified envelope formation
pdab04510
Focal adhesion
pdab04512
ECM-receptor interaction
pdab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135770837 (col4a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135770837 (col4a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
135770837 (col4a3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135770837 (col4a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdab04147
]
135770837 (col4a3)
00536 Glycosaminoglycan binding proteins [BR:
pdab00536
]
135770837 (col4a3)
Exosome [BR:
pdab04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
135770837 (col4a3)
Glycosaminoglycan binding proteins [BR:
pdab00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135770837 (col4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
135770837
NCBI-ProteinID:
XP_065136748
LinkDB
All DBs
Position
8:complement(16061659..16121455)
Genome browser
AA seq
1659 aa
AA seq
DB search
MKMASYLLGMMLVGLFLFGLPTQAKDDSDCVCSGKSQCDCHGIKGDAGEPGFPGLDGVLG
IQGHQGNEGPPGESGPKGSMGFPGYTGPKGSRGTPGIAGYFGPPGLPGHPGRQGPRGRSG
YPGCNGTKGDPGVPGYGGLMGAPGQRGIPGMQGPEGHTYYFPLPKQVNGRPGRPGKDGEK
GPRGSPGLPGPIGPEGPKGAYGLPGVPGPQGVKGTEGRSMGIPGPSGQKGNMGLPGIPGD
KGVKLFVRGPKEPKGDQGDPGDVGCPGLSGRQGLPGPKGMKGQRGEPGNPGKDGKDGLRG
EVGQPGERGDVGFQGITGINGEWGQKGDRGPPGLPGEVIITNGNVKGPKGFPGPPGPPGL
RGSEGFIGFPGSPGPPGPSIPGPKGRPGPPGFRGLKGDMGEPAAYISGPKGLDGPPGERG
PPGDPGPPGTPNVKGQLGPRGVKGEKGLIGLEGFRGDAGKPGEQGDMCRLCAVFNADPGP
PGKRGEPGQPGEPGGEGGQGSKGSQGFQGPQGGPGNQGSSGCPGVPGPQGSKGDPGSVTA
IGEKGQEGNPGAAGPAGIHGRDGRPGNPGLKGPPGAKGNPGPPGLKGNRGDPGLNGEPGR
TGPMGIQGAMGVGQPGPPGAKGSLGPVGRPGNPGEPGEKGSSGSVGMILGDPGPPGPPGP
PGQPGLPGIKGCIGVLGFPGPTGFKGDKGLSIPGAPGGPGPKGDKGLKGRPGQPAIGSVG
RPGPPGPPGNPGLKGDKTFGPPGSVGRQGMPGDEGDLGETGAFGPPGSRGCPGQGGRDGP
PGDPGQRGLDGPPGVDGVPGCCSPGAKGDQGPPGSNGVDGPPGLRGPKGPQGETGSPGQG
LPGPTGIAGIPGKNGETGSTGQQGPKGFRGRDGLAGFPGTRGNSGNPGSIGPPGATGNRG
QPGPPGSKGFMGSNGVPGNRGRSGELGDIGAIGLKGQPSSIVAQGDPGDPGPPGLTGVPG
SKGDKGIQGNYGNFGKNGLPGNPGPPGPPGDPGLKGSPGNPGFEGCIGDPGIVGFPGVKG
NKGSPGIRGESGTPGNPGQNGPKGLKGDPSEPGPGLPGPPGPKGEPGRPGDRGDKGDKGI
SGNQGPPGPGGRPGDRGEAGVPGGPGPPGPPGEKGLDGLSGPAGYPGPSGAPGGPGSAGN
PGLPGPRGEQGRDGIPGPAGTKGDRGPTVNGIPGPPGIKGEKGFKGNPGPQGPCGPPGPY
GPPGDIGPPGPPGVSGPRGCKGAPGICADGPKGERGPLGPSGLQGLPGPRGPPGNPGPGL
KGDKGVVGPRGLVGGPGNIGEQGVPGEPGRDGDPGRRGAKGDYGPMGLMGPVGQKGNFGP
NGAPGLKGRKGPLGRKGPKGCDVVAEVITTPGDPGLPGVVGEKGRQGEPGAPGGPGPQGT
QGRKGAMGPAGAPGSAGVPGPRGDMGPLGKQGNRGLSGEVGRKGAVGPPGTPRDAQTDSI
LFTKHSQKITVPTCPSGSRLLYEGFSLLFINGNNRGHGQDLGTLGSCMQRFSTMPFVVCN
PDDTCRYASRNDYSYWLSTDTPVSSETDLISGDVLEQYISRCAVCEAPANVIAVHSQTNQ
IPQCPRGWQSLWQGYSFVMQTAAGAEGSGQPLVSPGSCLEEFRRIPFIECHGRGTCNFFP
DSYSYWLASLDPDRMFSIPVRQRTIQPTLISRCRVCMKV
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggcttcttacttattgggaatgatgctggtcggactgttcttgttcggactt
cctacacaagcaaaggatgacagcgattgtgtttgcagtggaaaatcccagtgtgactgt
catggaatcaaaggcgatgcgggtgagcctgggtttcctggactagatggtgtactagga
atccaaggacatcaaggaaatgaaggccctcctggggaatccggtccaaaaggaagtatg
ggatttccaggttacaccggacctaaaggctctaggggaactccagggatcgcaggatac
tttggtccaccaggacttcctggtcatcctgggagacaggggcctaggggtcgttctggt
taccctggatgcaatggcacaaagggtgatcctggtgtcccagggtatggaggattaatg
ggggctcctgggcagcggggaattcctgggatgcaaggacctgagggacatacctattac
tttccacttcctaagcaagtgaatggacgtcctggacgtccaggcaaggatggagagaaa
ggtccgcgcggatcaccggggttaccaggaccaattggaccagaaggcccaaaaggcgca
tatggattacctggagttcccgggccacaaggagtcaagggtactgagggtcgaagcatg
ggaatacctgggcccagtggccagaaggggaacatgggtctgcctggtataccaggagat
aaaggtgtaaagttatttgtaagaggaccaaaagagcctaagggtgaccagggagatcct
ggagacgttggctgccctggattatctggtcgtcagggccttcctggtcctaagggaatg
aaggggcaaagaggggagcccgggaatccgggtaaagatggtaaggatgggctgcggggc
gaggtcggtcaaccgggtgagcgtggagatgttgggtttcaaggaattactggaataaat
ggagaatggggtcagaaaggtgatcgcggcccccctggtctcccaggagaggtaattata
acaaatgggaacgttaaaggtccaaaaggttttccaggcccaccgggaccccctggtctc
cgaggtagtgaaggtttcatcggctttccaggaagtccaggtccaccagggccttctata
ccgggacctaaaggaagaccaggacctccagggtttaggggtttaaaaggggacatgggg
gaacctgcagcttacatcagtggtcctaaaggattagatggaccaccaggagaacgggga
cccccgggtgaccccggacctccaggaactccaaatgtcaaaggccagttgggaccaaga
ggggtaaagggtgagaaaggcctaataggtcttgagggtttccgtggagatgctggaaaa
ccaggagagcaaggagatatgtgcaggttgtgtgctgtctttaatgctgaccctggacct
ccaggaaaacgtggagagcctggccagcctggggagccaggtggtgaaggtggtcaaggt
tccaaaggatcccaaggctttcaaggtccacagggtggtcctggtaatcagggttcgtca
ggttgccctggcgttcctgggccccaaggttccaaaggagacccaggttcagtaactgca
attggggagaagggccaggaaggaaaccccggtgcagctggaccagcagggatacatggg
agggatggcagacctggcaaccctggcctcaaaggaccaccaggagctaaaggaaaccca
ggtcctccaggccttaaaggaaaccgtggagacccaggacttaatggagagcctggtcgc
acaggtccaatgggcatccagggggcaatgggtgttggccaaccagggccacccggagca
aaagggagtttgggaccagtcggccgacctggaaatccaggagaaccaggtgagaaagga
tcttctggatcagtaggaatgatccttggagacccaggccctcctggtcctcctggtcca
cctggtcaaccagggcttccaggcattaaaggctgcattggggttcttggattccctgga
ccaactgggtttaaaggggataaaggactgtcaataccaggagctcctggaggtcctggt
cctaaaggtgataaaggtttgaaagggaggcctggtcaacctgctattggaagtgtaggg
cgtcctggccccccaggaccaccaggaaatccaggcctaaagggggataaaacattcggc
cctccagggtccgtgggtcggcaggggatgccaggagatgaaggagaccttggggaaacg
ggggcctttggtccacctggatcacgtggatgtccaggtcaaggaggaagggacgggcca
ccaggagaccctggtcagcggggtttggatggtccacctggagtcgatggtgttccagga
tgctgctctccaggggccaaaggtgaccaagggcctccaggatcaaacggagtagatgga
cccccagggctgaggggcccgaaggggccacagggtgaaactggttcacctgggcaaggt
ttacccggtcccacgggtatcgctggcatacctgggaaaaatggagagacaggttccacc
ggtcaacagggaccaaaaggtttcagaggtcgagatggcttagcaggtttcccaggtaca
cggggaaattctggaaatcctggaagcattggtccacctggagcaactggaaaccgtgga
caacctgggccccctggatctaaaggtttcatgggtagcaatggagtgccaggtaataga
ggaagatccggagaattaggagacataggagccattggtctcaaaggacaaccatcaagc
attgtcgctcaaggggatcctggtgaccctggcccaccaggtcttactggtgttcctggt
tctaaaggagacaagggaattcagggcaattatggtaattttgggaagaatggacttccg
ggaaatcctggcccaccaggtcctccgggtgaccctggtttgaaaggcagtcctggaaat
ccaggttttgagggctgcattggggatccagggattgtgggatttccaggcgtaaagggc
aacaaaggatcacctggaattcgtggggagtccgggactcctgggaacccaggccaaaat
ggaccgaagggtctgaaaggtgaccccagcgagcctggaccagggcttccaggaccacct
ggtccaaagggtgagcctggacgtccgggggatcgaggtgataagggtgataagggtata
tctgggaatcaaggtccaccgggtccgggaggacgtcctggggacagaggagaagcagga
gtaccaggaggtccaggacccccaggacctcctggtgaaaagggtttagatgggctttca
ggtccagctggatacccagggcccagtggtgcaccaggtggtcctggttcggctgggaat
cctggacttccaggaccccgcggagaacaaggcagggacggtattcctgggccagctgga
actaaaggagacagaggccccactgtaaatgggattcctggtccacctggtatcaagggt
gagaaaggttttaaaggcaatcctggaccccaaggaccatgtgggccaccaggaccctat
gggccacctggagacatcggtcctcctggtccacctggagtatcgggaccacgtggatgt
aaaggtgcacctggaatctgtgctgatggtccaaaaggggagcgaggacccttaggacca
tctggccttcaaggcctcccgggtccacgtggccctcctggtaacccaggtccaggcctg
aagggagataaaggcgttgttgggccacggggacttgtaggagggcctgggaatatcggt
gaacaaggagttccaggtgaaccaggtagagatggagatcctggacgcaggggtgccaaa
ggagactatgggcctatgggtctcatggggccagttggtcagaaaggaaattttggtcct
aatggcgctccaggattaaaaggtcgtaaaggacctcttggacgtaaagggcccaaaggt
tgtgatgttgtggccgaggtcatcactaccccaggagaccctggtttacctggagtagtt
ggtgagaaagggagacaaggagaacctggagcaccaggaggaccaggtccacaaggaaca
caagggcggaaaggagccatgggtccagctggagctcctggaagcgctggagtccctggc
ccgagaggagacatgggaccactaggaaagcaaggtaatcgtggtttgtcaggtgaagtg
ggacgtaagggtgcggttggaccacctggaacaccacgggatgcccaaacggattcaatt
ctttttaccaagcatagtcaaaagataactgtgccaacctgccccagtggatcgagactt
ttgtatgaaggattttcgctcctctttatcaatggcaataaccgtggacacgggcaagac
ctaggaactctgggaagctgtatgcaaagattttccaccatgcctttcgtggtgtgtaat
cccgatgacacctgccgctacgcctctcgaaatgattactcctattggctgtctacagac
acaccggtatcaagcgagacagatctgatctctggtgacgtactggaacagtacatcagc
agatgtgcagtgtgcgaggcgccagctaatgtaatagcagttcacagccagacaaatcaa
atcccacagtgccctagaggatggcagtctttgtggcaaggttattcctttgtaatgcaa
acagctgcaggtgcggaaggatccgggcagccgctggtttctcccggttcgtgtttggaa
gaattccgaaggattccgtttatagagtgtcatggccgtggcacctgtaacttcttccct
gattcctacagctactggctggcatcgctcgaccccgacagaatgttcagtattccggtc
cgtcagagaacaatacaacctactctcatcagccgctgtcgggtctgtatgaaggtgtaa
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