Paramisgurnus dabryanus (large-scale loach): 135770920
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Entry
135770920 CDS
T10799
Symbol
dchs1a
Name
(RefSeq) protocadherin-16
KO
K16507
protocadherin-16/23
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pdab04515
]
135770920 (dchs1a)
Cell adhesion molecules [BR:
pdab04515
]
Cadherins
Cadherin related
135770920 (dchs1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
Cadherin_pro
Cadherin_4
RIFIN
CADH_Y-type_LIR
TMEM154
ASFV_J13L
RibLong
Motif
Other DBs
NCBI-GeneID:
135770920
NCBI-ProteinID:
XP_065136921
LinkDB
All DBs
Position
8:complement(18586152..18706465)
Genome browser
AA seq
3287 aa
AA seq
DB search
MKRVTLRERRTIMDPLQNDGTLKWRILVILYVALEITTVRTSMVPGTLQLQLDEEQPAGT
VVGDISAGLPPGMTASHYFISDHQGTGVGTDLDIDESTGIIKTARVLDREVRDQYSFIAV
TMTGITVEVTIIVNDINDHTPVFPKKRATFKISEQTTKGTKFPLEPALDADENQLTTQGY
IITDGNVGQAFLLETRRGSNKVLYLDLMVNTVLDRETRSAYTLVLEAFDGGSPKRTDQMI
LDVIVQDINDNAPIFNQSRYHAVISENLQPGNNILQVFASDADEGENGLVLYDINRRQSD
PDRYFVIDSRSGVITLNKPLDYEMRRVHELVIQARDNATQPEVTNAFVTIHVRDYNDNQP
TMTIIFLSEDGSPRISEGAQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFALTTKDNI
IYLICVDKILDREVQDQYELRVMATDSGTPPLRAESSFTIQVTDVNDNPPMFDQPEYTQV
ISEVALPGSFVLQVTARDKDQGPNGDVQYSILHNERSLSDWFNVDTVTGIITTQTQLDYE
TDPMPSITVVATDRGRPPLSSTAVVKVILQDINDNEPAFSTKFYNTSIKENAAAGTCFTK
VSATDADGGSFGSISYSLGSGPGTVTPSQFTVDKDNGQICTTTSLDRDQGPASYDFAVTA
VDGGGLSSVAYVRVDLIDVNDNRPAFYPLSYAVSLSTQSTPGTSVLRVTAHDPDAEENGR
VTYRTAAGGSSPFFTLNKDTGVISLSRALHGKANSVITMLISAQDGGGLTAPANARVNIS
IVAGLVAPPVFEQAQYFFVVSEDALRGTQVGIVRASTKNGVSKDISYTISSGDSTGYFTV
DPETGALRTSLPLDHEAQPSLNLEVQAHCGNPPAFGQTRVRITVVDINDNAPFFLPSSSE
SLILPENTRMGTVVYKVLAEDRDSGSNGLLSFDLFTSSAQRTFSIDRNSGYIRLIRSLSY
DTMPRYDLQVIAKDSGAPQLSSTFTLVVHVQAENNQGPVFDSLTYRVELKESTPLNTRFL
QVRAVNRDGSVISGVPSTSSAPLAYHLHPDGDAAGFGIVSDSGWLFVKSSLDREAKEMYL
LTVLASSGFGQMKKTGSATVRVSVMDENDNSPRFTQDRAFLAVHENLPAGTGFGRVSASD
RDAGLNGRLSYRLVHLDRHFQINSYTGEISTRLSLDRELQSSYQLIVVAQDGGTPPRSST
STAFITVLDENDNAPSFIHTQTGSELLLQVLEGQSPGFLLGTINAKDPDEGENGTIFYSM
SGPRAERFSLNPNTGELRSSSPLSHSDRPEYSFTILASDRGSPARSSTTALRIQVLSSSK
GSPSANSQSITLNSVEGAKPGSIVGSVRSPDSQTLPGSRIIYTVVGSTDRDGTFVIDRET
GDVYLARELDFEKAPRYTLQVEVDDFSMPLPKSHFVTLIIDVQDSNDHAPQFPQDPITIV
VPENMEPGSSIYTFHAIDKDGSGPNSEIHYSILQQWPDSMDLLFLDPTTGVLSLGMMLDH
ERTASLLLVVQATDSAPDVSQRRRGTVTARIFVTDVNDNEPVFISPSVVSVMEDQPVGFV
VVYVMAVDADQGENGRVSYRIQSGNTGGKFSLNPDTGSLSILRPIDREEQDLYNLTIVAE
DHGSQQHSSTQLLSIQVIDVNDEAPYFEESEYEAFIAENQPAGTTVLVVSASDLDQGTNG
DITYDSIVGDEFSIHPVTGVITTTKALDREVQGVYAVTVYVRDGGSPPNFAKTTVRVTVL
DENDNRPAFGRLYYSLEVPENQEPVTLFTIRATDQDSGDNGVLHYKITEGDRFGDFHLDK
TSGVLSTSRPLDRESKARYTLTVEAQDQGTPSLTSTVTLDINVLDLNDNSPVFPSNSYSV
EISEDAPEGSLVLKVSASDQDEGSNSQLVYFLSQESKGMFIVDQHTGRISTAALLDREKV
SSYSFRVYAMDSSAANPHNTSAQVTVHILDVNDNAPFFITDPLIINVSSSSVSNHKVLAT
MRAEDKDFGANGSVFYRFANPVKGFTINSLTGAIQATEKLHALTQSQRTLIVEAMDQGNP
SQSSLGVVVVYIREQSYQGVRFSRNTRDVSLQENAAKGTAVVQIQAHYPDGSTSGINYSI
FSGNKQRSFTISPHTGEIWVESSTGLDFEETPRLRLVVKAETASSSSFMAVNLLLQDVND
NLPRFQLHNYFAYVREAQGYDHPIIQVLADDLDQGQNGQVTYSIRSSSMSNLFKIDSVTG
SISTAAIMDREIWTQTNLVIMATDRGTPRLAGSATLTVIIVDLNDNSPTIPVPRELRIPE
NTLIGTVITQVTGNDVDSGPALSYSLLLDSDSQGRFGIHRYGGGVSLTAPLDFEERTWYT
LTVSSSDSKQQSQANVTVLVEDVNDNAPVFSQDLYEVTLAEHSPSESSVITVTATDKDSG
ENGKITYRVVSTKDMFYIDPNNGTLFVKRKVTFDPQRPSILVVIEASDSGTPPLSALATV
QIHISDVNDNAPVFHQTEYKASVSEDEVPGSTILTLEAVDVDLFRDNCGFDFAIASGNIG
NVFQIESSVRFLEGHGFQTVGMLILVDKLDFETVNAYNLTVVVSDRGIPQRSSSVPVLIT
VTDTNDNPPAFSRAEYNIVVNEGVEKGTEILQLSALDPDSTPNGEVEYFISSGDESELFS
VDRWNGSLRLRRSLDSDQHSSHLLIIQASNGVGHFALVPVTVEVKDINNNRPYFPLKTLT
ASIRENQPQNALVTILHAIDHDNGAYGKLTYSMYSGNGTDFFVVNQTSGEVRTRISFDFE
KDSKLNFTALAKDAGNFSATVTVQVFVMGEDEYDPVFTHSDFEFRVPEGAKKGQSIGQVN
AKDEDGGLDGIVLYTLANSSPYFEVNTTTGVISLKMDAYHRHISRSKRETRQMTLDVIAH
SPLENSRKASAQITIDVTHTSFGLSTDMNVVLASAIAASLVAIVVLVIIVVVIVLLRSKR
YKEQEACTRIVTHGTVLESLEEPKVQGNEKLYHQTLPGYAADQSGTGGTTYTRGGSLDPS
HSSGRGSAEAEAAEDDEIRMINEYPRVSSISSSMQEHISARGPDSGIQQDADQLSDISCE
QGMDANHWFKGKKLGSLSGTLLSSQLPTYRDEGGGYLGVGRGLSISHSKDYTFPEDGKPV
VDGSLTAIVASDEELRGSYNWDYLLDWCPQFQPLANVFTEIARLKDENAPPSHRRPFHSK
SKTDPKPRIDPPPLITSVAHPGAKTVLPKPAVGRTFPHLSSLRRSPIDHDGSVSSIAMSP
NFSPSLSPLAAHSPAISTFGVTQGHSSSILNTTEHSLEHIEEAELRI
NT seq
9864 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagtgacgttgcgagaaagaaggacgattatggatccattacagaacgacggg
actttgaagtggaggatattggtgatcctctatgtcgcacttgaaatcacgactgtccgc
acatccatggtgccaggaacattgcagcttcagttggatgaggagcagccagcaggtact
gttgtaggtgacatcagcgccggcctaccacctggaatgactgcttcccattacttcatc
tcagatcatcaaggtacgggtgtcggcacagatctagacatcgacgagagtacgggcatc
ataaaaacggccagagtcctggatcgggaagtgcgagaccagtacagcttcatagctgtc
accatgactggtataacagttgaagtcaccatcattgttaatgacattaatgatcacaca
ccagtgttccccaaaaaaagagccacttttaaaatctctgaacagacgactaaaggcact
aagtttcctcttgagcctgccctggatgctgatgagaaccagctaaccacgcaaggctac
attattacggatggaaacgtaggacaggcttttcttttggaaactagacggggatccaac
aaagtgctgtatttggatctgatggtcaatacagttttggacagagagacgagatctgcg
tataccctggtcttggaagcatttgatggtggttcacccaagaggacagatcagatgatc
ctggatgtgattgtacaagacataaatgacaacgcccccatcttcaaccagagtcgctat
catgcagtgatctctgagaatcttcaacctgggaacaatatactgcaggtgttcgcttcg
gatgctgacgagggtgaaaatggcttggtgctgtatgacatcaatagaagacagagcgac
cctgaccgttactttgtcattgactctcgcagtggagttatcacgctcaacaaacctttg
gattatgagatgaggagagtccatgagcttgtgatacaggcacgagacaatgccactcag
cccgaagtaaccaatgcatttgtgactatccatgttcgagactacaatgacaaccagccc
accatgaccatcatcttcctcagcgaagacggttctccgcgcatctccgaaggagcgcag
cctggccagtacgttgccaggatttccgtcacagatcctgattatggtgaatacgccaac
gtcaacgtatctttggaggggggagatggaaagtttgccctgacaacaaaagacaacata
atatatctcatctgcgtagacaagatccttgatcgtgaagtgcaggaccaatatgaactc
cgagtcatggcaacagattccggaacccctcctttacgtgcagagtcctcgttcaccatt
caggtcacagacgtcaacgataacccacctatgtttgaccagcctgagtacacccaggtc
atttcagaggtggcccttcctggaagttttgtactacaggtaacagctcgagataaagac
caaggacccaatggggatgttcagtacagcatcctacacaatgaaagaagtctttcagac
tggttcaacgttgacacggtcactggcattatcaccacccagacccaactagattacgaa
acggaccctatgccaagcataactgtggtagccactgacaggggtcgaccgccattgtcc
tctacagctgtggtcaaagtgatcctacaggatataaatgataatgaacctgcttttagc
accaaattctacaatacatccattaaggaaaatgctgcagctgggacctgcttcacaaag
gtgtcagccactgatgcagatggtgggtcttttggctccatctcctactctttgggctct
ggtccaggcaccgtaactccgtctcagttcactgttgacaaagacaatgggcagatctgt
actaccaccagcttggaccgtgaccaaggtccagccagctatgactttgctgtcacagca
gtggatgggggaggactgagttcagttgcctacgtacgggtggacctgatagatgtaaat
gacaatcgaccagcattctaccctctcagttatgcggtcagcttgagcacgcagagcacg
ccgggaacctccgtcttgagggtcactgctcacgacccagacgccgaagagaacggcagg
gttacgtaccgtacggcggctggtgggagctcacctttctttacccttaacaaggatacc
ggcgtgatctcactgtcgcgtgctctacatggaaaggcaaactcagtcatcactatgttg
atctcagcacaagatggtggtggtcttaccgctccagccaatgccagggtcaacatcagc
attgtggcaggactggtcgcacctcctgtattcgagcaagctcagtacttctttgtggtc
tctgaggatgccctgcgtggaacacaagttggcattgtgcgggccagcactaagaacggt
gtctcgaaggatatctcctacactataagctcgggtgactcgactggctatttcacagtg
gatcctgagacgggtgctttgagaacaagcttgcctctggatcacgaggcccaaccgagc
ttaaatctggaggttcaggcgcactgcggtaacccaccagcctttggccagactcgggta
cgcattacagtggtggacatcaacgacaacgcccccttctttttgccctcttcatccgag
tcattgattctacctgaaaacaccaggatgggtacagtggtgtacaaagtgctagccgaa
gaccgtgactctggatcaaatggtctgttgagttttgacctgttcaccagcagtgcccag
agaaccttcagcattgatcgcaacagcggatatatccgtctaattaggagtttgtcatac
gacaccatgcctcgctacgacctgcaggtcattgccaaagacagtggagctcctcagctg
agctctacgttcacgctggtcgtccacgtacaggccgagaacaaccaaggacctgtgttc
gatagcttaacgtatagagtagagctaaaggaaagcacaccgcttaacactcgtttcctg
caagtgcgagctgtaaacagagatggcagcgttatcagcggagtgccgtctacatcttct
gctccgctagcgtaccacttgcatccagatggcgacgctgcagggtttggcattgtgtct
gatagcggctggctgtttgtgaaaagctccttagacagagaagccaaagaaatgtacctt
ctcacagtgctggcttcatcaggcttcgggcaaatgaagaagacgggtagcgccactgta
cgtgtgtccgtaatggatgaaaatgacaactcaccgcggtttacccaggacagggcgttc
ttggcagtgcatgaaaacctgccggcagggactggtttcggtagggtgtctgccagcgac
agagacgctggtcttaacggtcgactgagctaccgcctggtccatctggatcgccacttt
cagatcaactcttacacaggggagataagtacaagactatcccttgatcgtgaacttcag
tccagctaccaactcatagtagtggctcaggatggtggaacccccccacgcagctccacc
agcactgctttcatcacagtcctggatgaaaatgataacgccccctcctttatccacact
cagacaggaagtgagctcttactgcaggtgttggaaggtcagtcacctggatttctgctc
ggtaccatcaatgccaaagatccggatgagggggaaaatggaactatcttttactccatg
tctggtccccgagcagaacgtttctctctaaaccctaacaccggagagctgcggtcttcc
tccccactgagccactctgatcgacccgagtactccttcaccattctggcttccgatcga
ggttcaccagctcggagctccaccacagcactgagaatacaggttctaagctcaagtaaa
ggatcaccctctgcaaattcccaatcaataaccttaaattctgtggagggagccaaaccc
ggctctatcgtgggttctgtgcgatcccctgattctcaaacccttcctggatcccggatc
atatataccgtggttgggagcactgaccgtgatggaacctttgttatagaccgcgaaaca
ggcgatgtttatctggcacgcgagcttgactttgaaaaggcaccgcggtacacccttcaa
gttgaggtggatgacttctccatgccgcttcctaaaagtcactttgttacattgataatt
gacgtccaagacagcaacgatcacgctccgcagtttccacaagaccccatcaccatagtc
gtccctgagaacatggagcccgggtcctctatctacacctttcacgccatagataaagac
ggtagcggacctaacagcgaaatacactactcgatccttcaacagtggccggacagcatg
gaccttctgtttttggatcccaccacaggggttttgtctttggggatgatgttagaccat
gagagaacagcatctctgctattggtggttcaagcgactgattcagctcctgatgtgagt
cagcggcggcgtgggacggtcacggctcgtatctttgtcacggatgtgaacgacaatgag
cctgttttcatctcaccgtcagtggttagtgttatggaagatcaacctgtaggatttgtc
gtggtctatgtcatggctgtagatgcagaccagggtgagaacggacgggtgtcgtaccgt
attcaaagtggcaacacgggaggaaagttcagccttaaccccgatacagggtctttgtcg
attcttaggccaattgaccgtgaagagcaagacctctataacctgaccatagtggcagaa
gatcacggttcacagcagcactccagcacacagttactgtcaatccaggtgattgacgta
aatgatgaagctccgtatttcgaggaaagtgaatatgaagcttttattgccgagaatcag
cctgcaggaaccacagtgctggtggtttcagcttccgacttggaccaagggaccaatgga
gatataacatacgacagcattgtgggagatgaattcagcattcatccggtgacaggagtc
ataacgaccaccaaagctttggatagagaggtccaaggagtttatgccgtgacagtttat
gtcagagatggtggttctccgccaaatttcgccaagaccacagtgcgcgtgaccgtgctg
gatgagaatgacaataggccggcctttggcaggttgtactacagtctggaagttcctgag
aaccaggagcctgtgacacttttcaccattagagccacagatcaagactcaggggacaat
ggggtgctgcactacaaaatcacagagggtgaccgttttggagatttccacttggacaag
acatcaggtgtgctgtccacttccaggcctttggacagagagtccaaagcaagatacacc
ctcactgtggaggcacaagatcagggcacgccatcactcacaagcaccgtcactttggat
atcaatgtgttagatctgaatgacaacagcccagtgtttcctagcaacagctactctgtg
gaaatatccgaggacgccccagaaggttctctggttctgaaggtatcagcttcagatcag
gatgagggttccaacagccagcttgtatacttcttgagccaggagtccaaaggtatgttc
atcgtggaccaacacacaggtcggatcagtacagcggcactcctcgacagagaaaaagtc
tcctcctacagcttccgagtctatgccatggactcctcagccgccaacccccataacacc
tctgctcaggtgaccgtccacatcttggatgtaaatgacaacgcccccttctttatcaca
gacccactgatcatcaacgtctcaagcagtagtgtctccaaccataaggttctggccact
atgagagccgaagataaggactttggtgcaaacggttcagtgttttatcggtttgccaac
ccggtcaaagggttcactataaactccttgacaggagccatccaggccaccgagaagctc
catgcactaacccagagccaacggaccctcattgttgaggcaatggaccagggaaaccca
tcccagtcgtctctgggagttgtggttgtgtacatcagagaacagagttatcaaggcgtt
cgcttctctcgcaacaccagggatgttagcctgcaggaaaacgctgccaaaggtacagca
gtcgttcagatacaggctcactatcctgatggttctaccagtggcatcaactacagcatt
ttcagtggcaacaagcagaggtctttcaccatcagtcctcacacgggtgagatttgggta
gagagctccacaggtctggattttgaggagacccctcgactccgcctggtggtcaaagct
gaaactgcatcttccagctccttcatggcagtcaaccttctcctgcaggatgtcaatgac
aaccttccacgctttcagctacacaattactttgcttacgttcgtgaggcccagggctac
gatcaccctattattcaggtgctggctgatgacctggaccagggccagaatgggcaggtg
acctattccataaggtcatcgtccatgagcaacctcttcaagatcgattcggttacaggc
agtatctccaccgctgccatcatggacagagagatctggacacaaaccaacttggttatt
atggcaacagacagaggcacacctcggttggcaggctctgctaccctcactgtgatcata
gtagacctgaatgacaacagtcccaccatccccgttccacgagaattacgaatccctgag
aatactttgattggaactgtgatcacccaggttacagggaatgatgtggattccgggcca
gccctttcctattcacttctcctggactcggactctcagggaagatttggaatacatcgc
tatggaggaggagtgtccttgactgcacctctggactttgaagagagaacttggtacacg
ttgaccgttagctcctcggactccaagcaacaaagtcaggcaaatgtgaccgtgcttgtg
gaggatgtcaatgataacgctccagtcttctcccaggacctttatgaggttactctcgca
gaacactcaccatcagaaagctctgttatcacagttactgctacagataaagactctgga
gaaaatggaaagataacatacagggttgtttcaacaaaggacatgttctacatcgaccca
aacaatggtactctttttgtcaagcggaaggttacatttgatccacagcgtccttccatt
ttggtggtgattgaagccagtgatagtggaacacctccactgtccgccctagccactgtt
cagatccatatatcagatgtcaatgacaatgcccctgttttccatcaaaccgagtataaa
gcctccgtctcggaagatgaagttcctggttcaaccattcttaccctggaagcggtggat
gtggacttatttagggacaactgtggctttgattttgccatcgccagtggaaacatcggc
aacgtcttccaaatagagagcagcgttcgttttctcgaaggccatggatttcagacagtc
ggaatgctgatcttagtcgacaagcttgactttgagactgtgaatgcctacaatctcact
gtagttgtatcagaccgtggcatcccgcagcgaagctccagtgttccagtgctgatcact
gtaacagacaccaatgataacccaccagcctttagcagggcagaatacaacattgtcgtc
aatgaaggggtagaaaaaggaactgagatactacaactttctgcgctagatccagactcg
acacctaacggagaggttgaatattttatcagttctggagacgagtctgagcttttctct
gtagatcgctggaatgggtcacttcgtttgagaagatctctagatagtgaccagcattcc
tcgcatttgctcatcattcaggcctcaaatggtgtgggtcactttgctcttgttcctgta
actgtggaggtgaaggacatcaataacaaccggccttacttccctcttaaaacacttaca
gcaagcattcgtgaaaaccaaccccaaaatgctctcgtcaccattttacatgccattgat
cacgacaacggagcatatggcaagctgacgtattctatgtattcaggcaatggtacagat
ttctttgtagtgaaccaaacctcaggagaggtgcgaacccgcatttctttcgacttcgag
aaggacagcaagttaaattttactgctttggctaaggatgcaggaaacttctcagctaca
gtcaccgttcaggtttttgtgatgggtgaagatgaatatgacccagtttttacccactca
gactttgaatttcgtgtacctgagggtgcaaagaaaggacaaagcattggacaggtaaat
gctaaagatgaggatggaggcctggatggcattgtcctttacactcttgcaaacagttca
ccctactttgaagtcaacacaactactggagtgatatctctaaagatggatgcctatcat
cgacatataagccggtccaagcgagagacgcgccagatgacgttggatgttattgcccac
agtcctctggaaaactcacgcaaagcttctgcccagatcacaattgatgttactcataca
tcatttggcttatccacagacatgaatgtagtgcttgccagtgctatagcagcttcttta
gtagccattgtggtgttggtcatcattgttgtggtcatagtccttttgagatccaaaagg
tacaaagaacaagaggcttgtacgagaatagtcacccatggtactgttctagagagtctt
gaggaaccaaaagttcaaggtaatgaaaagctctaccatcagacccttcctgggtatgca
gcagaccaatccgggactggggggactacctatacacgaggtgggtcgctcgatccgtcc
cactccagtggacgtggctccgccgaagcagaggcagcagaagatgatgagattcggatg
atcaatgaatatccccgagtttccagtatctcctcttccatgcaggaacacatatccgct
cgtgggcctgactctggtatccagcaagacgctgatcagctctctgatatttcttgtgag
caaggaatggatgcgaatcattggtttaaagggaagaagttgggaagtttaagcgggaca
ctattatcaagccagttgccaacataccgggatgaaggaggtggatatctcggagttgga
agaggtcttagcatctcacattcaaaagattacacattcccggaggatggtaagcctgtt
gttgatggttctcttacagcaattgtggctagtgacgaagagctaaggggcagttacaac
tgggactatctcctcgactggtgccctcagtttcagcctctggctaatgtctttacagaa
atagctcggttaaaagatgaaaacgcaccacctagccatcggcggccttttcattccaaa
tccaagactgatcccaagcccagaattgacccacctcctcttattacctcagtagcgcac
ccaggggccaaaactgttctgccaaaacctgctgtaggccgaacatttccccacttgtct
tcactgcgaagatctcccattgaccatgacggttcagtttcttcaatagcaatgtctccg
aatttctcgccttcgctttcgccacttgcagcccattccccagccatctctacttttggg
gtcacacagggtcactcttcgtccattctcaatacgactgagcactcattggaacacatt
gaggaggcagaactgagaatataa
DBGET
integrated database retrieval system
