Paramisgurnus dabryanus (large-scale loach): 135771528
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Entry
135771528 CDS
T10799
Symbol
rffl
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdab04121
]
135771528 (rffl)
Enzymes [BR:
pdab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
135771528 (rffl)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
135771528 (rffl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
FYVE_2
SAP
Prok-RING_4
zf-RING_5
Ish1
FYVE
zf-C3HC4_2
MUG2_C
SDE2_2C
Motif
Other DBs
NCBI-GeneID:
135771528
NCBI-ProteinID:
XP_065137903
LinkDB
All DBs
Position
8:complement(40829518..40850834)
Genome browser
AA seq
349 aa
AA seq
DB search
MWASCCGWLCLDDPTVEETRNSSHRQAFTNSGFSSTPSPTAPEHVCKACGGRFDSLARKH
MCMDCKKNYCSRCSAQLELQPWLCHTCQRFHGILFERAALMKFKVKDLRDYLHLHGVPTQ
MCREKEELVELVLGQHTPTSEMHVPSPTSIHLDQQETPDIPVITASPPGNNGTTELGPQD
QATEDERSLSMAEATAESDMDAELQVEQELQSSDSEEVLAPGRRASLSDLTSAEDIEALS
VRQLKEILARNFVDYKGCCEKWELMERVTRLYHDQKDLQHILSNAMEGIDAGSGIPGEEN
LCKICMDSPIDCVLLECGHMVTCTKCGKRMSECPICRQYVVRAVHVFRS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtgggccagttgctgcggctggctctgcctggatgatcccacagtggaggaaaccaga
aatagctctcatcgccaggccttcaccaactcgggcttcagcagtaccccatctcccacc
gcaccagaacacgtgtgcaaggcatgcggaggtcgatttgacagccttgccaggaagcac
atgtgcatggactgcaagaaaaattactgcagccggtgctccgctcagctagaactccag
ccatggctttgccacacctgccagcggttccacggcatcctgtttgagcgagcggcgctg
atgaagttcaaagtaaaagacctgagagactacctccacctgcacggggtgcctacgcag
atgtgccgggagaaagaggagctggtcgagctggttctcggccagcatacgcccacgtcc
gagatgcacgttccttcccctacaagtatacacttagatcaacaggagacccctgatatt
ccggtcataacggcgagcccaccagggaacaatggtacaacagaattgggaccccaggat
caagcgacagaagatgaacggagcttgtcgatggcagaggcgacagctgaaagtgacatg
gacgcagagctgcaggtggagcaggagctgcagtcatcagactcagaggaggtgttggcc
cctgggcggcgggcgtccctgtcagacctcacgtcagcggaggatatcgaggctctgagc
gtccggcagttaaaggagattctggcgaggaactttgtcgactacaaaggctgctgtgag
aagtgggaactgatggagagagtcacacgcctttaccacgaccaaaaagatctgcaacac
atattgtctaacgccatggaaggcatagacgcagggtctgggattcccggtgaggagaac
ctttgtaagatctgtatggactcacccattgactgtgttcttttggagtgcggacacatg
gtcacgtgcaccaaatgcggcaagcgcatgagcgaatgccccatctgccggcagtatgtg
gtgcgagcagtgcacgtgttcaggtcctga
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