Paramisgurnus dabryanus (large-scale loach): 135771670
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Entry
135771670 CDS
T10799
Symbol
lrfn1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pdab04515
]
135771670 (lrfn1)
04990 Domain-containing proteins not elsewhere classified [BR:
pdab04990
]
135771670 (lrfn1)
Cell adhesion molecules [BR:
pdab04515
]
Immunoglobulin superfamily
SALM family
135771670 (lrfn1)
Domain-containing proteins not elsewhere classified [BR:
pdab04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
135771670 (lrfn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
fn3
Ig_2
LRR_5
ig
LRR_9
LRR_14
Ig_DSCAM-DSCAML_C
C2-set_3
LRRCT
DUF4834
Motif
Other DBs
NCBI-GeneID:
135771670
NCBI-ProteinID:
XP_065138077
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Position
8:3064465..3149002
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AA seq
756 aa
AA seq
DB search
MERLVICVLVFGALVKAQHCPGRCICQTISPTLTLLCAKTGLLFVPPTIDRKTVELRLTD
NFITAVRRKDFMNMTSLVHLTLSRNTISQIAPHAFVGLKSLRALHMDGNRLTVIYSDQLK
GLINLRHLILGNNQIHMVEVSSFDEFVSTIEDLDLSYNNLRTLPWEAIARMTNINTLTLD
HNLIDHIGAGTFTLLTKLVRLDMTSNRLQKLPPDTLFQHAQVLSDPKMSSSSKLTVSFGG
NPLHCNCELLWLRRLTREDDLETCASPEHLMDKYFWSIQEEEFICEPPLITKHQVTKSYV
MEGQGITLKCKAMGDPEPAIHWRFPDGKLVHNNSRTILYENGTLDILITTLKDSGAFNCV
ASNAAGIATAAVEVTMIPLPLFVNNTGHMKEADPGLSDITTSTKSGNNDTKSQNKRVMVE
DLTSNSAVIHWPSERHIPGIRMYQIQYNSTIDDTLVYRMIPSSSKTFKINDLAAGREYEL
CVLAVYDDGITSLTATRVVGCVQFHTAAEAGQCRFIHSQFLGGTMIIIIGGIIVASVLVF
IIILMIRYKAYSGTDGAKAKARTGSAAHVQSQTNGSQGRTGRSSSKQRSQPGEERPCRDE
SPANTDCKALVLLKMEETKEELKVELPPICSEKAPPSRRASLGGPPSDDTQTDSSLTGST
MSLCLIGPNAGPAEAPRLKDKKGALANMGLLPSELARTRHRFSFDGDYALFQSNSYPRRA
RTRRHKSTTHLNADVSPPCSRRVTFSSTEWMLESTV
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggagaggcttgtgatttgtgtgttggtgtttggtgcgctggtgaaggctcagcattgc
ccgggtcgatgcatctgtcagaccatctcacccacactcaccctactgtgtgctaagact
gggcttctgttcgtgccgccgaccatcgaccgcaagaccgtagagcttcgcctgaccgac
aatttcatcacggccgtccggaggaaagactttatgaacatgacgagtctggtgcatctt
acgttgtcacgcaacaccatcagccagatcgctccgcacgcttttgtgggacttaaatct
ttgagggcgttgcacatggacggaaaccgcctgacggtcatttacagcgatcagctgaag
ggtttgatcaacctcagacaccttatactgggcaataatcagattcacatggtggaagtg
tcctctttcgacgagtttgtttccaccatagaggacttagatttgtcctacaacaacctg
aggacattgccatgggaggctatagccaggatgacaaatataaacacattaaccctggat
cacaatctaatcgatcacatcggagcagggacctttacgctactcaccaagttagtacgg
ttggatatgacatcaaaccgcttgcagaagttgcctcccgatactctcttccagcatgcc
caggtgctgtccgacccaaagatgtccagttcatccaagctgaccgtgagcttcggcggc
aaccctcttcactgtaactgtgagctgctctggttgcgtcgcttgaccagggaagacgat
ctggagacatgcgcttctccggaacatctgatggataaatacttctggtctatccaggag
gaggagttcatatgtgagccccctctgatcaccaaacaccaggtgaccaaatcctacgtc
atggaaggtcaggggatcacattgaagtgtaaagcgatgggcgaccctgaacccgcaata
cactggcgctttccggatggcaaactggtacacaataattctcgtacaattctgtatgaa
aatggcactctggacatcctgataaccaccctgaaggacagcggggcttttaactgcgtt
gcatctaatgcagccgggatcgcgacggccgccgtggaggtcaccatgattccgttaccg
ctgttcgtgaataacacgggacacatgaaggaggcggacccgggcctctctgacatcaca
acctccaccaaatctggcaacaatgacacaaagtcccagaacaaaagggtcatggttgag
gatctaacttccaattcggctgtgatccactggccatcggaacgtcacattcctggcatc
agaatgtatcagatccagtacaacagcaccatagacgacacactagtgtacagaatgatt
ccctcttcgagtaagacatttaagatcaacgatctggctgccggtcgagaatacgagctg
tgcgtgttggccgtttatgacgatggcatcacgtctctgacggcaacgcgtgtggtgggc
tgcgttcagttccacacggcggccgaggccggtcagtgccgcttcattcacagtcaattc
ctcggtggaaccatgatcatcatcatcggtggaattatcgtggcgtctgtccttgtcttc
atcatcatactcatgatccggtacaaggcctacagcggtacagacggcgctaaagccaaa
gcgcgaaccggatccgccgcgcacgtccagtcgcagacaaacgggagtcaggggcgaaca
ggccgctccagctcgaagcagcgttcgcagccgggtgaagaaaggccgtgccgtgatgaa
tcacccgcaaacacggactgcaaggcgttggtcctgctaaagatggaggagaccaaggag
gagctcaaggtggaactgccacccatctgctcggaaaaagcgccgccctccaggcgagcc
agcttgggcgggccgccctccgacgacacccagacggacagcagcctcacaggctccacc
atgtccctgtgcctgatcgggcccaacgccggcccagccgaagccccacgcctcaaggac
aagaagggggcgttggcaaacatggggttgctgcccagcgagctggcccggactcggcac
aggttctccttcgacggagactacgctctgttccagagcaacagttacccgcgacgggcc
cgaacccgcaggcacaaatccaccactcatctgaacgctgacgtatcgccgccctgcagt
cgtagggtgacgtttagcagtacggagtggatgttggagagtacggtgtga
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