Paramisgurnus dabryanus (large-scale loach): 135772865
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Entry
135772865 CDS
T10799
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03250
Viral life cycle - HIV-1
pdab04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
135772865 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
135772865 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdab03400
]
135772865 (samhd1)
DNA repair and recombination proteins [BR:
pdab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
135772865 (samhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
PDEase_I
Motif
Other DBs
NCBI-GeneID:
135772865
NCBI-ProteinID:
XP_065138497
LinkDB
All DBs
Position
21:26223804..26251665
Genome browser
AA seq
624 aa
AA seq
DB search
MDRTMKRPREDQDEESVWDVKRVHDEDFMRWGVNETVAYLKREGLEEWEQVFREQEITGQ
GLLCITEVHLEKMGISPLGSRLKVLHCLQKLWQISNDDMKVFNDPIHGHIEMHPLLVRII
DTPQFQRLRHIKQLGGTYLVFPGASHNRFEHSIGVGYLAGCLVQALNQRQPELLITRQDT
LCVQIAGLCHDLGHGPFSHMFDGMFIPKVRPGEKWKHEMASVQMFDHLVKVNDLEKVMVQ
HGLTLPDDLIFIKEQIAGPLDASILDTTQWPYKGRPKEKSFLYEIVANKRNGIDVDKWDY
FARDCYHLGIQNNFDYHRFLKFARVCKVRGRKHICTRDKEVGNLYDMFHTRNCLHRRAYQ
HKVGNIIETMITEAFVKADPHIKIQGSSGKIFTISSAINDMEAYTQLTDHIFEQILYSST
PELAEARAILNNIVCRRLYKCVGQTTPETHVVVSQEKQLDWAKEVANSKPSGLDENLKAE
DFVVSVIQMDYGMKEKNPINNVHFYCKKDPTKAIKIRKNQVSKLLPERFAEQLIRVYFKK
TDDRSLEAARKCFVQWCMDKNFTKPQDGDIVAPELTPLKRDWHTHERDDEDSEIDDDDKD
EYTDKTDKTPKKTGRNVKVNLFQA
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggatagaacgatgaaacgaccgagagaagatcaagatgaagaatctgtgtgggacgtg
aaacgggttcatgatgaagattttatgcgctggggcgttaatgaaacagtcgcatatctc
aagagagagggactcgaagaatgggaacaagtcttcagagaacaggaaataacaggacag
gggctactatgcattacggaggtacatttggaaaagatgggcatttcccctctgggttct
cgcctgaaagttcttcactgtcttcagaagctctggcaaatctcaaatgatgacatgaag
gttttcaatgaccctatccatggccatattgaaatgcatcctttactagtccgcattata
gacacgcctcaatttcagaggcttcgtcacatcaaacagctgggaggaacttatctagta
ttccctggggcttcccacaaccgctttgaacattcaattggagtgggatatttggcagga
tgtctagttcaggctcttaatcagagacaaccagagctactcatcacaaggcaagacact
ctttgtgtccagattgctgggctgtgccatgacttgggtcatggccctttctctcatatg
tttgatggcatgttcatccctaaagttcgacctggagagaaatggaagcatgagatggcc
tcagttcagatgtttgaccaccttgtgaaggtaaatgatcttgaaaaggtgatggtacag
cacgggttgactctgcccgatgaccttatattcattaaagaacagatcgctgggcccttg
gatgcatctatcctggacactacgcaatggccatataagggcagaccgaaggagaaatca
ttcctgtatgagatagtggctaataaaaggaatggcattgatgtagacaaatgggattat
tttgctcgagactgctatcatcttggtatccaaaacaattttgactatcatcgtttcctc
aagtttgcccgagtgtgtaaagtgagaggaagaaagcacatttgtaccagggacaaggaa
gttggtaatctctatgacatgtttcacacgcggaactgccttcatcggcgggcgtatcag
cataaagtgggcaacatcattgagacaatgatcacagaggcctttgtaaaggctgatcct
catatcaagatccagggctcctcaggcaagatatttacaatctcttcagctataaacgac
atggaggcctacacccaacttacagatcatatatttgagcagattctgtactcatccaca
ccggaactggctgaggctcgtgcaatcttaaacaacattgtctgtagacgtttgtacaaa
tgtgtgggtcagaccacaccagagacacatgtagttgtgtcacaggaaaaacagcttgac
tgggcaaaagaagtggccaattccaaacccagtggcttagatgaaaacctaaaggctgag
gactttgtagtcagtgtcattcaaatggattatggaatgaaggagaaaaaccccatcaac
aacgtccacttctactgtaaaaaggatcccactaaagccatcaagattcgcaaaaaccag
gtgtccaaactcctgccggagcgatttgctgagcagcttatcagggtgtactttaaaaag
acagatgacaggagcctggaagctgccagaaagtgttttgtccaatggtgcatggacaaa
aacttcactaaaccacaggatggagatatagttgctccagagctcaccccccttaaaaga
gactggcacacccatgaaagagacgacgaagacagtgagatagacgatgatgataaagat
gagtacactgataaaacagataaaacgcccaaaaagactggtcgtaacgtaaaagtgaac
ctttttcaagcttag
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