Paramisgurnus dabryanus (large-scale loach): 135773333
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Entry
135773333 CDS
T10799
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135773333 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135773333 (cstf3)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
135773333 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
PRP6_TPR
NRDE-2
TPR_19
TPR_16
TPR_6
NorB_cytochrome_c-like
Motif
Other DBs
NCBI-GeneID:
135773333
NCBI-ProteinID:
XP_065138907
LinkDB
All DBs
Position
9:38191299..38206770
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AA seq
716 aa
AA seq
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MSTETAPDQAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQAIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAIGSLLKKNMLLYFSFADYEESRMKHEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDLRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSAEK
SGEIWARFLAFESNIGDLASILKVERRRFLAFKDEYEGKETALLVDRYKFMDLYPCSPCE
LKALGYKDVSRAKYAAMIQEAVVAPSAPTLKDEADRKPEYPKPDTCQMIPFQPRHLAPPG
LHPVPGGVFPVPPAAVVLMKILPPPSCFTGPFVQVDEMMETLRRCVLPETVDAAVELITG
KQLEMNSEGNGPVENHGVANKSLKRPNADSDEEEDKGSVAPPIHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccgaaactgcaccagaccaggcggcagagtacatcccagagaaggtcaagaaa
gcagagaagaagttggaagaaaatccatatgacctcgacgcgtggagcatactgattcga
gaagcacagaaccaagccatagacaaagcaaggaagacatatgagcgacttgtcgcccag
tttcccagttcgggccgattctggaaactttacattgaagctgagatcaaggctaaaaac
tatgacaaggttgaaaagttatttcagaggtgcttaatgaaggtcctgcatattgacctg
tggaagtgttacctctcatatgtccgtgaaaccaaaggaaaactgcccagctataaggaa
aagatggcacaagcttatgattttgctttggataagataggaatggaaattatgtcctat
cagatttgggtggattacatcaatttccttaagggggttgaagccgtgggctcgtacgca
gagaatcagcgcatcacggccgtcagacgcgtgtaccagagaggctgtgtcaatcccatg
attaatatagagcaactctggagggattacagtaaatatgaggagggcataaatgtgcac
ttggccaaaaagatgattgaagatcggagcagggactacatgaatgccaggagagtcgct
aaggagtatgagacggtgatgaagggtctggaccgaaacgccccgtcggtgccgccccag
aactccccacaggaggcccagcaggtggagatgtggaagaaatacatccaatgggaaaag
agcaacccactgcgaaccgaagaccagacacttatcacgaaaagagttatgtttgcctat
gagcagtgccttttggtacttggacatcatcctgacatctggtacgaagctgcccagtac
ctggaacagtcaagtaaactactggcagaaaagggggacatgaataatgccaagctgttt
agtgatgaggcagctaacatttatgagcgtgctataggatctctgctcaagaagaacatg
ctactttatttctcctttgcagattatgaagagagtcggatgaaacacgagaaggttcat
agtatatacaaccgcctcctcgccatagaagatattgatcctaccttggtctacattcag
tacatgaagttcgcaagaagagctgaaggcatcaagtctggccgaaccatctttaaaaaa
gcaagagaagaccttcggacgcggcatcatgtgtacgttactgctgctcttatggagtac
tactgcagcaaggataaatctgtggcctttaagatatttgagcttggactgaagaaatac
ggcgacattcctgaatacattttggcctacatcgattacctctctcacctaaacgaggac
aacaacaccagagtcctgtttgagagagtgctaacgtctggaagtctttccgctgagaag
tctggggaaatttgggcacgctttcttgccttcgagagcaacatcggggacttagccagt
atcctaaaagtagagcgaagacgattcctggcctttaaggatgagtacgagggcaaggag
acggctctgctggtggaccggtacaagtttatggatctgtatccttgttcaccctgcgag
ctcaaagccctcggctacaaggatgtgtctcgtgccaaatatgcagcaatgatccaagag
gctgtggttgctccatccgcaccaacgctgaaggatgaagccgaccgcaaacccgagtac
cccaaacccgacacttgccagatgatcccttttcaaccacgacatctcgcccctcctgga
cttcaccctgttcctggaggagtgtttcctgtcccacctgctgctgttgttctcatgaag
atcctccctcctcccagctgctttacaggtccttttgtgcaagttgacgagatgatggag
actctcagaagatgtgtactgccagagaccgtagatgccgctgtagagttgatcactggc
aaacagttagagatgaacagtgagggaaacggtcctgtggagaatcatggagtggcaaac
aaatctctaaaaaggccaaacgcggattcggatgaagaggaagacaaagggtccgtcgca
cctccgattcacgacatctatcgagcacgacagcagaagaggatccgatga
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